Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is hutH [H]
Identifier: 77456593
GI number: 77456593
Start: 416375
End: 417898
Strand: Direct
Name: hutH [H]
Synonym: Pfl01_0365
Alternate gene names: 77456593
Gene position: 416375-417898 (Clockwise)
Preceding gene: 77456592
Following gene: 77456594
Centisome position: 6.47
GC content: 64.24
Gene sequence:
>1524_bases ATGTCCCAGGCTGAAAAAATCGTTATCGCCGACGCTCCGATGCGTTGGCAGGATGTGGTCGCAGTCGCCCGTCACGGCGC GCAGCTCGAGCTGTCGGCGCAGACCTGGGCGCGCATTGAAAACGCGCAGGGCATCGTCCAGCGTATCGTCGCCAGCGGCG AACGCGCCTATGGCGTGAACACCGGGCTCGGTGCGCTGTGCAACGTCTCGCTGAAAGACGAGCAGCTCAGTCAGCTGTCG CGCAACACCTTGCTCAGCCATGCCTGCGGCGTCGGTCCGGTCCTGGCCGACGAGCAGACCCGGGCAATCATGTGCGCCGC GATCCGCAACTACAGCCACGGCAAATCCGGCATTCATCGCCGGGTGGTTGAAGCGCTGCTGGCGCTGCTCAATCGCGGCA TCACCCCGCAAGTGCCGTCCCAGGGTTCGGTGGGTTACCTGACCCACATGGCGCACATCGGCATCGCGCTGCTGGGCGTG GGTAATGTCAGCTATCGCGGGCAAGTGGTTTGCGCGCAGCAGGCGCTGGCCGAAGAGGGCCTGCAACCGGTGCAGCTCGG GGCGAAGGACGGTCTGTGTCTGGTCAACGGCACGCCGTGCATGACCGGCCTCGGTTGCCTGGCGATCGCCGACGCCACGC GCCTGCTGCAATGGGCCGACGTGATCGGCGCCATGAGCTTCGAGGCCCAGCGTGGCCAGATCGCCGCGTTCGATGCCGAG ATCATTGCGCTCAAACCGCATCCGGGCATGCAGCAGGTCGGCGTCAATCTGCGCGCCTTGCTCGATGGCAGTGAAGTGAT TGCGTCGAGCAAAGGCATTCGCACTCAGGATGCCTTGAGCATCCGTTCGATCCCACAGGTGCACGGCGCCGCCCGCGATC AACTGGAACACGCAATCAAACAGATCGAAACCGAGCTCAACGGCTGCACCGACAACCCGTTGCTGCTGGGCACGCCGGAT GACTTCCGTGTCATGTCCCAGGCCAACCCGCACGGACAATCGGTGGCGCTGGCGGCGGATCTGCTGGCGATTGCGATGGC CGAAATCGGCTCGATTGCCGAGCGGCGTCTGGATCGCCTGATCAACCCGCACGTCAGCGGTCTGCCGGCGTTTCTGGTGG CCAATCCGGGGGTGAACTCCGGGATGATGATCGTGCAATACGTCGCCGCGTCGCTGTGCGCGGAAAACCGCCAGTTGGCG CAACCGGCGGTGCTAGACAACTACGTCACCTCGGGCCTGCAGGAAGACCATCTGAGCATGGGCACCAACGCCGCGCTGAA GCTGCATCGCGCGCTGGAAAACTGCACGCAGATCCTCGCCATCGAGTACCTGCTGGCGGCCCAGGCGTTTGAATTTCTCA AGGAACAGCGATTCGGCGCCGGCACCGATACCGCCTGGCGACTGCTGCGCGAAAAAGTCCCGGCCTACGATCAGGACCGC TGGCTGGCGCCGGACATCGCCGCTGCTGCAAGCGTTCTGAAAGACCCGGATCTGCTGCACAACGCATTACCGAATCTGCA CTGA
Upstream 100 bases:
>100_bases AGCAGGCTCGCTCCCACAGTTGGAATGCGGTCTCCTGTGGGAGCGAGCCTGCTCGCGATAGCGTCGGCAAAGCTGCATCA ATGTTCGGATGAGGTTTTAG
Downstream 100 bases:
>100_bases CAACTACCCATACCAGCGTGCCAAGGCGCGGATCGTCCAAAAGACGAGAGGCGACGGATAACGGAATGCTCCGGAGCGAC TGGTAGTTAATAACAATGCC
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MSQAEKIVIADAPMRWQDVVAVARHGAQLELSAQTWARIENAQGIVQRIVASGERAYGVNTGLGALCNVSLKDEQLSQLS RNTLLSHACGVGPVLADEQTRAIMCAAIRNYSHGKSGIHRRVVEALLALLNRGITPQVPSQGSVGYLTHMAHIGIALLGV GNVSYRGQVVCAQQALAEEGLQPVQLGAKDGLCLVNGTPCMTGLGCLAIADATRLLQWADVIGAMSFEAQRGQIAAFDAE IIALKPHPGMQQVGVNLRALLDGSEVIASSKGIRTQDALSIRSIPQVHGAARDQLEHAIKQIETELNGCTDNPLLLGTPD DFRVMSQANPHGQSVALAADLLAIAMAEIGSIAERRLDRLINPHVSGLPAFLVANPGVNSGMMIVQYVAASLCAENRQLA QPAVLDNYVTSGLQEDHLSMGTNAALKLHRALENCTQILAIEYLLAAQAFEFLKEQRFGAGTDTAWRLLREKVPAYDQDR WLAPDIAAAASVLKDPDLLHNALPNLH
Sequences:
>Translated_507_residues MSQAEKIVIADAPMRWQDVVAVARHGAQLELSAQTWARIENAQGIVQRIVASGERAYGVNTGLGALCNVSLKDEQLSQLS RNTLLSHACGVGPVLADEQTRAIMCAAIRNYSHGKSGIHRRVVEALLALLNRGITPQVPSQGSVGYLTHMAHIGIALLGV GNVSYRGQVVCAQQALAEEGLQPVQLGAKDGLCLVNGTPCMTGLGCLAIADATRLLQWADVIGAMSFEAQRGQIAAFDAE IIALKPHPGMQQVGVNLRALLDGSEVIASSKGIRTQDALSIRSIPQVHGAARDQLEHAIKQIETELNGCTDNPLLLGTPD DFRVMSQANPHGQSVALAADLLAIAMAEIGSIAERRLDRLINPHVSGLPAFLVANPGVNSGMMIVQYVAASLCAENRQLA QPAVLDNYVTSGLQEDHLSMGTNAALKLHRALENCTQILAIEYLLAAQAFEFLKEQRFGAGTDTAWRLLREKVPAYDQDR WLAPDIAAAASVLKDPDLLHNALPNLH >Mature_506_residues SQAEKIVIADAPMRWQDVVAVARHGAQLELSAQTWARIENAQGIVQRIVASGERAYGVNTGLGALCNVSLKDEQLSQLSR NTLLSHACGVGPVLADEQTRAIMCAAIRNYSHGKSGIHRRVVEALLALLNRGITPQVPSQGSVGYLTHMAHIGIALLGVG NVSYRGQVVCAQQALAEEGLQPVQLGAKDGLCLVNGTPCMTGLGCLAIADATRLLQWADVIGAMSFEAQRGQIAAFDAEI IALKPHPGMQQVGVNLRALLDGSEVIASSKGIRTQDALSIRSIPQVHGAARDQLEHAIKQIETELNGCTDNPLLLGTPDD FRVMSQANPHGQSVALAADLLAIAMAEIGSIAERRLDRLINPHVSGLPAFLVANPGVNSGMMIVQYVAASLCAENRQLAQ PAVLDNYVTSGLQEDHLSMGTNAALKLHRALENCTQILAIEYLLAAQAFEFLKEQRFGAGTDTAWRLLREKVPAYDQDRW LAPDIAAAASVLKDPDLLHNALPNLH
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=499, Percent_Identity=36.0721442885772, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI17567831, Length=500, Percent_Identity=36.8, Blast_Score=288, Evalue=6e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 54136; Mature: 54005
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAEKIVIADAPMRWQDVVAVARHGAQLELSAQTWARIENAQGIVQRIVASGERAYGVN CCCCCEEEEECCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC TGLGALCNVSLKDEQLSQLSRNTLLSHACGVGPVLADEQTRAIMCAAIRNYSHGKSGIHR CCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH RVVEALLALLNRGITPQVPSQGSVGYLTHMAHIGIALLGVGNVSYRGQVVCAQQALAEEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCC LQPVQLGAKDGLCLVNGTPCMTGLGCLAIADATRLLQWADVIGAMSFEAQRGQIAAFDAE CCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCE IIALKPHPGMQQVGVNLRALLDGSEVIASSKGIRTQDALSIRSIPQVHGAARDQLEHAIK EEEECCCCCHHHHCCCHHEEECCHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH QIETELNGCTDNPLLLGTPDDFRVMSQANPHGQSVALAADLLAIAMAEIGSIAERRLDRL HHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INPHVSGLPAFLVANPGVNSGMMIVQYVAASLCAENRQLAQPAVLDNYVTSGLQEDHLSM HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCHHHHHC GTNAALKLHRALENCTQILAIEYLLAAQAFEFLKEQRFGAGTDTAWRLLREKVPAYDQDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC WLAPDIAAAASVLKDPDLLHNALPNLH CCCCHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure SQAEKIVIADAPMRWQDVVAVARHGAQLELSAQTWARIENAQGIVQRIVASGERAYGVN CCCCEEEEECCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCC TGLGALCNVSLKDEQLSQLSRNTLLSHACGVGPVLADEQTRAIMCAAIRNYSHGKSGIHR CCCHHHEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH RVVEALLALLNRGITPQVPSQGSVGYLTHMAHIGIALLGVGNVSYRGQVVCAQQALAEEG HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCC LQPVQLGAKDGLCLVNGTPCMTGLGCLAIADATRLLQWADVIGAMSFEAQRGQIAAFDAE CCEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCE IIALKPHPGMQQVGVNLRALLDGSEVIASSKGIRTQDALSIRSIPQVHGAARDQLEHAIK EEEECCCCCHHHHCCCHHEEECCHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH QIETELNGCTDNPLLLGTPDDFRVMSQANPHGQSVALAADLLAIAMAEIGSIAERRLDRL HHHHHHCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH INPHVSGLPAFLVANPGVNSGMMIVQYVAASLCAENRQLAQPAVLDNYVTSGLQEDHLSM HCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCHHHHHC GTNAALKLHRALENCTQILAIEYLLAAQAFEFLKEQRFGAGTDTAWRLLREKVPAYDQDR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC WLAPDIAAAASVLKDPDLLHNALPNLH CCCCHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA