| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
Click here to switch to the map view.
The map label for this gene is camA [H]
Identifier: 77454851
GI number: 77454851
Start: 260151
End: 261359
Strand: Direct
Name: camA [H]
Synonym: pREL1_0284
Alternate gene names: 77454851
Gene position: 260151-261359 (Clockwise)
Preceding gene: 77454850
Following gene: 77454852
Centisome position: 95.79
GC content: 68.07
Gene sequence:
>1209_bases ATGACGCAGGGGACCGCGCTCGTGGTCGGAGCCAGTCACTCGGGGGCTCAACTGGCGGCCAGCCTCCGGCAGGAAGGCTG GGCCGGCGAGATCATCCTCATCGGTGACGAGGGCGCACTGCCCTACCAGCGACCGCCGCTGTCCAAGGCCTACCTCGCCG GCAAGAGCACGCTGGAGGAGTTGGCGATCCGGAAGGCGGACTTCTACGCCAAGCAGCAGATCCAGCTGGTCAATGCGCGC GTGGAGTCGATCGATCGCACAGAGCGGCGGGTGATGCTGGCCGGCGGCAAGAGCATGTCCTACGACAAGCTGGCGCTGTG CACCGGTGGCCGGGCACGGCGACTCCCCGTGCCGGGAGCCGACCTCCCGGGCGTCCACTACTTGCGCACGTTCTCCGACG TGGAGCAGATCCGAGAGTCGGCGCAACCGGGTCGGCGAGCGGTCATCGTCGGCGGCGGCTACATCGGACTGGAGACAGCC GCCTCCCTGCGTGCGCTTGGACTGGACGTCACCGTTCTTGAGGCCGCCGACCGTGTGCTCGAGCGGGTCACCGCCCCGGA GGTATCGGCGTTCTACGAGCGCGTCCACCGCGACGCGGGAGTGACCGTCCGCACCCGGGCGCTCGTCGAGGCTTTGGGTG GCGACGACCGGGTCCGAGAGGTCCGGCTGGCCGGTGGTGAAAAAGTCCCAGCGGACCTCGTCGTCGTCGGTGTCGGGCTC CAGCCCAACACCGAACTCGCTGCCGCCGCGGGTCTCCTCGTCGACGACGGCGTCGTGATCGACGACCGGGCCCGTACCAG CGATCACGACATCGTGGCCGCGGGCGACTGCACCAGCCACGTGATGGCGAGGTACGGGCGGTGCGTCCGACTTGAGTCCG TGCCGAGCGCGGTGGAGCAGGCGAAGGTCGCCGCGGCGACCATGTGCGGCAAGGACAAGACCATCGCGGCGCTGCCGTGG TTCTGGTCGGATCAGTACGATCTCAAGCTCCAGATCGCGGGACTGAACACCGGCTACGACGAGGTCTTGCTCAGTGGTGA CCCGAGCTGTGATCGCGATCGCGACTTCACCTGCTTCTACTTCCGCGCAGGGGAACTCATTGCCGCTGACTGCGTCAACC GGCCGCGCGACTTCGCCTTCAGCAAGCGGACGCTCTCTCCGGGACTCCCCGTCGGCAGAGAAGCGTTACTGGGTATCGCA CCGAGCTGA
Upstream 100 bases:
>100_bases TCGAGGACATCGAGGTCGTCGGTGAGCCGGAGTACGTGCAGTCTAACTTCGTCAGGGGCATTAGCAAGCTCATGGTGCGC CTGACCCCGAAGCAGGACGC
Downstream 100 bases:
>100_bases GCGTCAGCTGGACCACGGGGCCGTCCGACCCGATCGGCGAGCCGTCGACACCGGCTCGCTACCCACCACCGACGGGACAC CATGCAGAGCACGATGACGA
Product: ferredoxin reductase
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTQGTALVVGASHSGAQLAASLRQEGWAGEIILIGDEGALPYQRPPLSKAYLAGKSTLEELAIRKADFYAKQQIQLVNAR VESIDRTERRVMLAGGKSMSYDKLALCTGGRARRLPVPGADLPGVHYLRTFSDVEQIRESAQPGRRAVIVGGGYIGLETA ASLRALGLDVTVLEAADRVLERVTAPEVSAFYERVHRDAGVTVRTRALVEALGGDDRVREVRLAGGEKVPADLVVVGVGL QPNTELAAAAGLLVDDGVVIDDRARTSDHDIVAAGDCTSHVMARYGRCVRLESVPSAVEQAKVAAATMCGKDKTIAALPW FWSDQYDLKLQIAGLNTGYDEVLLSGDPSCDRDRDFTCFYFRAGELIAADCVNRPRDFAFSKRTLSPGLPVGREALLGIA PS
Sequences:
>Translated_402_residues MTQGTALVVGASHSGAQLAASLRQEGWAGEIILIGDEGALPYQRPPLSKAYLAGKSTLEELAIRKADFYAKQQIQLVNAR VESIDRTERRVMLAGGKSMSYDKLALCTGGRARRLPVPGADLPGVHYLRTFSDVEQIRESAQPGRRAVIVGGGYIGLETA ASLRALGLDVTVLEAADRVLERVTAPEVSAFYERVHRDAGVTVRTRALVEALGGDDRVREVRLAGGEKVPADLVVVGVGL QPNTELAAAAGLLVDDGVVIDDRARTSDHDIVAAGDCTSHVMARYGRCVRLESVPSAVEQAKVAAATMCGKDKTIAALPW FWSDQYDLKLQIAGLNTGYDEVLLSGDPSCDRDRDFTCFYFRAGELIAADCVNRPRDFAFSKRTLSPGLPVGREALLGIA PS >Mature_401_residues TQGTALVVGASHSGAQLAASLRQEGWAGEIILIGDEGALPYQRPPLSKAYLAGKSTLEELAIRKADFYAKQQIQLVNARV ESIDRTERRVMLAGGKSMSYDKLALCTGGRARRLPVPGADLPGVHYLRTFSDVEQIRESAQPGRRAVIVGGGYIGLETAA SLRALGLDVTVLEAADRVLERVTAPEVSAFYERVHRDAGVTVRTRALVEALGGDDRVREVRLAGGEKVPADLVVVGVGLQ PNTELAAAAGLLVDDGVVIDDRARTSDHDIVAAGDCTSHVMARYGRCVRLESVPSAVEQAKVAAATMCGKDKTIAALPWF WSDQYDLKLQIAGLNTGYDEVLLSGDPSCDRDRDFTCFYFRAGELIAADCVNRPRDFAFSKRTLSPGLPVGREALLGIAP S
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI65787454, Length=374, Percent_Identity=29.6791443850267, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI21389617, Length=374, Percent_Identity=29.6791443850267, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI226437568, Length=374, Percent_Identity=29.6791443850267, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI22202629, Length=342, Percent_Identity=27.1929824561404, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI4757732, Length=342, Percent_Identity=27.1929824561404, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI1788892, Length=389, Percent_Identity=35.73264781491, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1789065, Length=279, Percent_Identity=30.4659498207885, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789765, Length=314, Percent_Identity=29.6178343949045, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17559934, Length=370, Percent_Identity=27.8378378378378, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI32564386, Length=312, Percent_Identity=25.9615384615385, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24639257, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI281359715, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI281359713, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24639250, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI18543267, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24639252, Length=373, Percent_Identity=29.2225201072386, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI24585130, Length=365, Percent_Identity=23.5616438356164, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24581020, Length=356, Percent_Identity=25.8426966292135, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573993, Length=356, Percent_Identity=25.8426966292135, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 43047; Mature: 42916
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGTALVVGASHSGAQLAASLRQEGWAGEIILIGDEGALPYQRPPLSKAYLAGKSTLEE CCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHCHHHHHH LAIRKADFYAKQQIQLVNARVESIDRTERRVMLAGGKSMSYDKLALCTGGRARRLPVPGA HHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEEECCCCCCCCEEEEECCCCCEECCCCCC DLPGVHYLRTFSDVEQIRESAQPGRRAVIVGGGYIGLETAASLRALGLDVTVLEAADRVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECHHHHHHHHHHCCCCHHHHHHHHHH ERVTAPEVSAFYERVHRDAGVTVRTRALVEALGGDDRVREVRLAGGEKVPADLVVVGVGL HHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEEEECC QPNTELAAAAGLLVDDGVVIDDRARTSDHDIVAAGDCTSHVMARYGRCVRLESVPSAVEQ CCCCCHHHHCCEEEECCEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEEEHHHHHHHHH AKVAAATMCGKDKTIAALPWFWSDQYDLKLQIAGLNTGYDEVLLSGDPSCDRDRDFTCFY HHHHHHHHCCCCCEEEEECCEECCCEEEEEEEEECCCCHHHEEECCCCCCCCCCCCEEEE FRAGELIAADCVNRPRDFAFSKRTLSPGLPVGREALLGIAPS EECCCEEEHHHCCCCHHHCCCCCCCCCCCCCCCHHHEECCCC >Mature Secondary Structure TQGTALVVGASHSGAQLAASLRQEGWAGEIILIGDEGALPYQRPPLSKAYLAGKSTLEE CCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHCHHHHHH LAIRKADFYAKQQIQLVNARVESIDRTERRVMLAGGKSMSYDKLALCTGGRARRLPVPGA HHHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEEECCCCCCCCEEEEECCCCCEECCCCCC DLPGVHYLRTFSDVEQIRESAQPGRRAVIVGGGYIGLETAASLRALGLDVTVLEAADRVL CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECHHHHHHHHHHCCCCHHHHHHHHHH ERVTAPEVSAFYERVHRDAGVTVRTRALVEALGGDDRVREVRLAGGEKVPADLVVVGVGL HHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEEEECC QPNTELAAAAGLLVDDGVVIDDRARTSDHDIVAAGDCTSHVMARYGRCVRLESVPSAVEQ CCCCCHHHHCCEEEECCEEEECCCCCCCCCEEEECCHHHHHHHHCCCEEEEHHHHHHHHH AKVAAATMCGKDKTIAALPWFWSDQYDLKLQIAGLNTGYDEVLLSGDPSCDRDRDFTCFY HHHHHHHHCCCCCEEEEECCEECCCEEEEEEEEECCCCHHHEEECCCCCCCCCCCCEEEE FRAGELIAADCVNRPRDFAFSKRTLSPGLPVGREALLGIAPS EECCCEEEHHHCCCCHHHCCCCCCCCCCCCCCCHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]