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The map label for this gene is fdxB [H]

Identifier: 77454849

GI number: 77454849

Start: 258420

End: 258740

Strand: Direct

Name: fdxB [H]

Synonym: pREL1_0282

Alternate gene names: 77454849

Gene position: 258420-258740 (Clockwise)

Preceding gene: 77454847

Following gene: 77454850

Centisome position: 95.16

GC content: 62.62

Gene sequence:

>321_bases
ATGGGTGTAGTCACCTTTGTTTCCTACGACGGCGAGAAGTATGAGGCGCCCCTGGACGAGGGACGGTCGCTCATGCAGGT
CGCGGTCGACAACATGTTGCCGGGCATCGACGGCGATTGTGGGGGAGAGGCCGCGTGCGGCACCTGTCACGTGATCGTCG
ACCCGCAGTGGTCTGAGAAGGTGGGTCTATCCGGACCTGTCGAGGAGGAGATGCTGTCGATGAATCCTGAGCGGCAGCCG
ACCTCCCGGCTGTCTTGCCAGATGGCGGTGTCGCAGGAGTGGGACGGCCTGGTCGTTCAGCTGCCCGAGTTCCAGATTTG
A

Upstream 100 bases:

>100_bases
TGAGCCGAAATCACAACATTCTGACTGATGTGATCATAGCCATACCCCCTGCGTAGTCGCTACGCTTTCATCACGTTTTC
GATCGTGAGGAGTCAAGCCA

Downstream 100 bases:

>100_bases
TCGAAAGGAAAGTGGATCGATGATTGCGAGCATTGCAGACACGCTGAGCGAGAAGGTCCAGTCGACCCTCCCGATGGGGC
TGCAGATCCGGGGCGCCCAT

Product: 2Fe-2S ferredoxin

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGVVTFVSYDGEKYEAPLDEGRSLMQVAVDNMLPGIDGDCGGEAACGTCHVIVDPQWSEKVGLSGPVEEEMLSMNPERQP
TSRLSCQMAVSQEWDGLVVQLPEFQI

Sequences:

>Translated_106_residues
MGVVTFVSYDGEKYEAPLDEGRSLMQVAVDNMLPGIDGDCGGEAACGTCHVIVDPQWSEKVGLSGPVEEEMLSMNPERQP
TSRLSCQMAVSQEWDGLVVQLPEFQI
>Mature_105_residues
GVVTFVSYDGEKYEAPLDEGRSLMQVAVDNMLPGIDGDCGGEAACGTCHVIVDPQWSEKVGLSGPVEEEMLSMNPERQPT
SRLSCQMAVSQEWDGLVVQLPEFQI

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17544202, Length=101, Percent_Identity=38.6138613861386, Blast_Score=65, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=37, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11521; Mature: 11390

Theoretical pI: Translated: 3.76; Mature: 3.76

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVTFVSYDGEKYEAPLDEGRSLMQVAVDNMLPGIDGDCGGEAACGTCHVIVDPQWSEK
CCEEEEEEECCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
VGLSGPVEEEMLSMNPERQPTSRLSCQMAVSQEWDGLVVQLPEFQI
CCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCC
>Mature Secondary Structure 
GVVTFVSYDGEKYEAPLDEGRSLMQVAVDNMLPGIDGDCGGEAACGTCHVIVDPQWSEK
CEEEEEEECCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCC
VGLSGPVEEEMLSMNPERQPTSRLSCQMAVSQEWDGLVVQLPEFQI
CCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]