Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
---|---|
Accession | NC_007491 |
Length | 271,577 |
Click here to switch to the map view.
The map label for this gene is 77454795
Identifier: 77454795
GI number: 77454795
Start: 212104
End: 212319
Strand: Direct
Name: 77454795
Synonym: pREL1_0228
Alternate gene names: NA
Gene position: 212104-212319 (Clockwise)
Preceding gene: 77454792
Following gene: 77454799
Centisome position: 78.1
GC content: 62.5
Gene sequence:
>216_bases ATGTCGTTCGTCGATTTCATGCGCAGCACAGCCGGGCGCGTACTGCGCATCGTCGTGGGTATCGCCCTCATCACGCTCGC CTTCTCCGTCGGTGGTGCCGTCGGCATTCTGGCAGGAGTGATCGGGGCAGTCTTCGTCCTCACCGGAGTAGTCAACGTGT GTCTGCTCGGCCCGTTGTTCTCCGTGGATCTGCGAGGACGGCCCAAGGCATCCTGA
Upstream 100 bases:
>100_bases CGGAACCACCATCGCGGGCGCTCGCCTGTTCGCCGACCTGTCCAGATCGGCGAGGTCGTCCGTCCAACAGTGAAAGACCG TCTACAGGACAGGACCGATC
Downstream 100 bases:
>100_bases GGAGGACTCGATCTCGGGACCGCCGACCTCAGAAATGGGGTATCACCTTGAATGCGGTGTATCCGTCGGTGTCCGCGGCG AGCGCAACACCGTTGGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSFVDFMRSTAGRVLRIVVGIALITLAFSVGGAVGILAGVIGAVFVLTGVVNVCLLGPLFSVDLRGRPKAS
Sequences:
>Translated_71_residues MSFVDFMRSTAGRVLRIVVGIALITLAFSVGGAVGILAGVIGAVFVLTGVVNVCLLGPLFSVDLRGRPKAS >Mature_70_residues SFVDFMRSTAGRVLRIVVGIALITLAFSVGGAVGILAGVIGAVFVLTGVVNVCLLGPLFSVDLRGRPKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7247; Mature: 7116
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVDFMRSTAGRVLRIVVGIALITLAFSVGGAVGILAGVIGAVFVLTGVVNVCLLGPLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVDLRGRPKAS HCCCCCCCCCC >Mature Secondary Structure SFVDFMRSTAGRVLRIVVGIALITLAFSVGGAVGILAGVIGAVFVLTGVVNVCLLGPLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVDLRGRPKAS HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA