Click here to switch to the map view.

The map label for this gene is ydfJ [H]

Identifier: 77454706

GI number: 77454706

Start: 135766

End: 137832

Strand: Direct

Name: ydfJ [H]

Synonym: pREL1_0139

Alternate gene names: 77454706

Gene position: 135766-137832 (Clockwise)

Preceding gene: 77454703

Following gene: 77454707

Centisome position: 49.99

GC content: 63.62

Gene sequence:

>2067_bases
ATGGTCGCACGCCGCCGATGGGTGTTCGGTGTCTGGCTGATCGCGCTTGTCGCGCTCGGATCTGCAGCGCCGTCGGTTTT
TTCGTCACTGGCGGGTGCTGGGTGGCAAGCCAACGGATCCGAATCGGTCCAGGTCCGTGAACTCGCGCAACAGCATTTCG
GCGGGAACTCCTCGGCCGCGGTTCAGGTGGTGGTCCATTCGGACACCGCGTCGATCGACGATCCCACCGTGCAGCAGAGA
CTCATCGACGTCACAGCTGTGTTCGACGGTGACACCCGGTTCGGTGCCGTCATCGCCCCACAGCCTGGTATGACCATCAG
CCCCGACGGCCACACCGGCATCCTCATCGCCGGCGCCAACGCAAACGCGGACGACATGGTCAAAGCCGTCGACGATGTCA
AAGACGAGCTGACCGCACTCTCCGGCGACGGTATCGAGGTCTATCCCACCGGATCCTCCGCGTTGTGGTCCGACTTCAAC
AAAGCCAACCACGATGCGATGATTCAGGCTGAACTATTCTCTTGGCCAGTCACTTTGGCGATCATGGTGCTCGCATTCGG
CTCCCTCGTCGCTGCCGGGCTGCCGCTGTTGCTCACAGTGGCCGGACTCGTCGCCTCCGCCGGCGGTTTGGTGCTGCTCA
ACGAGGTCACACCGATCTCGGTATGGGCGATGAATTTCGCGATGATGTTCGCCCTCGCTCTCGGCATCGACTACGCCTTG
TTCATCGTCGCCCGCTTCCGCGACGCCCTCCGTACGGCCGATCCACGAGCAGCCGTTGCCGAAACCATGGACACCGCAGG
CAAAGCGGTGCTCCTGTCCGGACTTACCGTCCTGGTCAGCCTCTCGGCAGTGCTGCTCGTTCCCGCACCGGCCGTGCGCA
CCATGGCCGTAGGCATCATGCTGGCCGTCACGTTCGTTCTGATCGCCACCATGACACTTCTTCCGGCCACGCTGGGCGCA
CTCGGCCCCAAGGTCAACGCAGCATCCCTGCCTTACGCGAAACGCCAACAGCACCGATCCCCGAAGTTCGCTGCGTGGGG
CGAATTGCTTCACAAGTACCCATGGCCGTTCGCGCTGGTCTCCGTCGGCATCCTCGTCGCCCTGGCCTTACCTGTCCTGG
GACTGAAGGTGGCAATGCCGTCCATCGCTGTCGTTCCCGACGATGCGCCCGTTCGGCAAGGTTACGAGTTGGTTCAGGCC
CAGTTCGGTGACGGGGCACCCGGCGCGCTGCAGATAGTTGTCCCGTCTTCCGATGCGGCTGCTACCGCCGCGGCAGCGAG
CAGCGTCGACGGGATCTCGATGGTCACCCCGCCCACACCATCAACAGACGATTCGAACTACACACTGCTGCAAGCGTTTC
CTGCCGTGGACCCTTCCGCAGAGGCCATGGGCACGATCCTCGGTGACCTACGCGCACAACTACCGGAGTCCGCGCTCGTC
GGCGGCGCGCCAGCGGAGAACCTCGACCTGCAGCAAGCCCTGAACGACTACCTACCGTTGGTTATCGGGATCATCCTCGC
CCTCGGCTTCATCCTGCTGCTCGTCGCTCTGCAGGTACCACTGATCGCGATCCTCGGCACCGCCGTCAGTTTGCTGTCGA
CCGCCGCAGCGTTCGGGGTTGCGAAGCTGATCTTCCAAGACGGACACGGATCGTCGCTGCTCGGCTTCACCCCTCAAGGT
TTCCTCGACGGCTGGGGGCCGGTGTTCTTCTTCGCGATGATCTTTGCCATCGCCATGGACTACACCGTGTTCCTGCTCGC
CACCGCGAAAGAACACTACGAGAAGACCGGGGACCCGAAGGCTGCTCAGGTCGACGGCCTCGCGCACTCCGGACGCGTCA
TCTTCGCCGCTGCGGCGGTCATGGTCGCCGTGTTCTTCACCTTCGCGCTCTCCGATCCGCTCCCACCCAAGGAAATGGGC
ATCATCCTCGGCGTCGCGGTGTTGCTCGACGCCTTCCTGATCAGGCTGATCCTGCTCCCGGTCCTGCTCCGGCTGAGCGG
TCACGCTGCATGGTGGGCACCGGGCTGGCTGCGCAGAATGTTGCCGTCGATCCGCTTCTCGCACTGA

Upstream 100 bases:

>100_bases
AGGAGAAGTTATGTCTGTGCCCGACACCGTGACGGCCACCGGTCGTGACGATCGTGATCGCGTATCTACACCCGGCATAC
TCGGACGCCTGGGAAGCGCG

Downstream 100 bases:

>100_bases
CCATTACAACACCTCACGGAGGAATCATGACCGATCCGAACATCACGCATTCGAGCACGTCTGCCGGGTGGCCGATCGAA
CGTATCGTCCCCGCACTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MVARRRWVFGVWLIALVALGSAAPSVFSSLAGAGWQANGSESVQVRELAQQHFGGNSSAAVQVVVHSDTASIDDPTVQQR
LIDVTAVFDGDTRFGAVIAPQPGMTISPDGHTGILIAGANANADDMVKAVDDVKDELTALSGDGIEVYPTGSSALWSDFN
KANHDAMIQAELFSWPVTLAIMVLAFGSLVAAGLPLLLTVAGLVASAGGLVLLNEVTPISVWAMNFAMMFALALGIDYAL
FIVARFRDALRTADPRAAVAETMDTAGKAVLLSGLTVLVSLSAVLLVPAPAVRTMAVGIMLAVTFVLIATMTLLPATLGA
LGPKVNAASLPYAKRQQHRSPKFAAWGELLHKYPWPFALVSVGILVALALPVLGLKVAMPSIAVVPDDAPVRQGYELVQA
QFGDGAPGALQIVVPSSDAAATAAAASSVDGISMVTPPTPSTDDSNYTLLQAFPAVDPSAEAMGTILGDLRAQLPESALV
GGAPAENLDLQQALNDYLPLVIGIILALGFILLLVALQVPLIAILGTAVSLLSTAAAFGVAKLIFQDGHGSSLLGFTPQG
FLDGWGPVFFFAMIFAIAMDYTVFLLATAKEHYEKTGDPKAAQVDGLAHSGRVIFAAAAVMVAVFFTFALSDPLPPKEMG
IILGVAVLLDAFLIRLILLPVLLRLSGHAAWWAPGWLRRMLPSIRFSH

Sequences:

>Translated_688_residues
MVARRRWVFGVWLIALVALGSAAPSVFSSLAGAGWQANGSESVQVRELAQQHFGGNSSAAVQVVVHSDTASIDDPTVQQR
LIDVTAVFDGDTRFGAVIAPQPGMTISPDGHTGILIAGANANADDMVKAVDDVKDELTALSGDGIEVYPTGSSALWSDFN
KANHDAMIQAELFSWPVTLAIMVLAFGSLVAAGLPLLLTVAGLVASAGGLVLLNEVTPISVWAMNFAMMFALALGIDYAL
FIVARFRDALRTADPRAAVAETMDTAGKAVLLSGLTVLVSLSAVLLVPAPAVRTMAVGIMLAVTFVLIATMTLLPATLGA
LGPKVNAASLPYAKRQQHRSPKFAAWGELLHKYPWPFALVSVGILVALALPVLGLKVAMPSIAVVPDDAPVRQGYELVQA
QFGDGAPGALQIVVPSSDAAATAAAASSVDGISMVTPPTPSTDDSNYTLLQAFPAVDPSAEAMGTILGDLRAQLPESALV
GGAPAENLDLQQALNDYLPLVIGIILALGFILLLVALQVPLIAILGTAVSLLSTAAAFGVAKLIFQDGHGSSLLGFTPQG
FLDGWGPVFFFAMIFAIAMDYTVFLLATAKEHYEKTGDPKAAQVDGLAHSGRVIFAAAAVMVAVFFTFALSDPLPPKEMG
IILGVAVLLDAFLIRLILLPVLLRLSGHAAWWAPGWLRRMLPSIRFSH
>Mature_688_residues
MVARRRWVFGVWLIALVALGSAAPSVFSSLAGAGWQANGSESVQVRELAQQHFGGNSSAAVQVVVHSDTASIDDPTVQQR
LIDVTAVFDGDTRFGAVIAPQPGMTISPDGHTGILIAGANANADDMVKAVDDVKDELTALSGDGIEVYPTGSSALWSDFN
KANHDAMIQAELFSWPVTLAIMVLAFGSLVAAGLPLLLTVAGLVASAGGLVLLNEVTPISVWAMNFAMMFALALGIDYAL
FIVARFRDALRTADPRAAVAETMDTAGKAVLLSGLTVLVSLSAVLLVPAPAVRTMAVGIMLAVTFVLIATMTLLPATLGA
LGPKVNAASLPYAKRQQHRSPKFAAWGELLHKYPWPFALVSVGILVALALPVLGLKVAMPSIAVVPDDAPVRQGYELVQA
QFGDGAPGALQIVVPSSDAAATAAAASSVDGISMVTPPTPSTDDSNYTLLQAFPAVDPSAEAMGTILGDLRAQLPESALV
GGAPAENLDLQQALNDYLPLVIGIILALGFILLLVALQVPLIAILGTAVSLLSTAAAFGVAKLIFQDGHGSSLLGFTPQG
FLDGWGPVFFFAMIFAIAMDYTVFLLATAKEHYEKTGDPKAAQVDGLAHSGRVIFAAAAVMVAVFFTFALSDPLPPKEMG
IILGVAVLLDAFLIRLILLPVLLRLSGHAAWWAPGWLRRMLPSIRFSH

Specific function: Unknown

COG id: COG2409

COG function: function code R; Predicted drug exporters of the RND superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004869
- InterPro:   IPR000731 [H]

Pfam domain/function: PF03176 MMPL [H]

EC number: NA

Molecular weight: Translated: 71768; Mature: 71768

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARRRWVFGVWLIALVALGSAAPSVFSSLAGAGWQANGSESVQVRELAQQHFGGNSSAA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCE
VQVVVHSDTASIDDPTVQQRLIDVTAVFDGDTRFGAVIAPQPGMTISPDGHTGILIAGAN
EEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCCEEECCCCCCEECCCCCCEEEEECCC
ANADDMVKAVDDVKDELTALSGDGIEVYPTGSSALWSDFNKANHDAMIQAELFSWPVTLA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCEEEHHHHHHHHHHH
IMVLAFGSLVAAGLPLLLTVAGLVASAGGLVLLNEVTPISVWAMNFAMMFALALGIDYAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
FIVARFRDALRTADPRAAVAETMDTAGKAVLLSGLTVLVSLSAVLLVPAPAVRTMAVGIM
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LAVTFVLIATMTLLPATLGALGPKVNAASLPYAKRQQHRSPKFAAWGELLHKYPWPFALV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHH
SVGILVALALPVLGLKVAMPSIAVVPDDAPVRQGYELVQAQFGDGAPGALQIVVPSSDAA
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHH
ATAAAASSVDGISMVTPPTPSTDDSNYTLLQAFPAVDPSAEAMGTILGDLRAQLPESALV
HHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHC
GGAPAENLDLQQALNDYLPLVIGIILALGFILLLVALQVPLIAILGTAVSLLSTAAAFGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLIFQDGHGSSLLGFTPQGFLDGWGPVFFFAMIFAIAMDYTVFLLATAKEHYEKTGDPK
HHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAQVDGLAHSGRVIFAAAAVMVAVFFTFALSDPLPPKEMGIILGVAVLLDAFLIRLILLP
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLLRLSGHAAWWAPGWLRRMLPSIRFSH
HHHHHCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MVARRRWVFGVWLIALVALGSAAPSVFSSLAGAGWQANGSESVQVRELAQQHFGGNSSAA
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCE
VQVVVHSDTASIDDPTVQQRLIDVTAVFDGDTRFGAVIAPQPGMTISPDGHTGILIAGAN
EEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCCCEEECCCCCCEECCCCCCEEEEECCC
ANADDMVKAVDDVKDELTALSGDGIEVYPTGSSALWSDFNKANHDAMIQAELFSWPVTLA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCEEEHHHHHHHHHHH
IMVLAFGSLVAAGLPLLLTVAGLVASAGGLVLLNEVTPISVWAMNFAMMFALALGIDYAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
FIVARFRDALRTADPRAAVAETMDTAGKAVLLSGLTVLVSLSAVLLVPAPAVRTMAVGIM
HHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LAVTFVLIATMTLLPATLGALGPKVNAASLPYAKRQQHRSPKFAAWGELLHKYPWPFALV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHH
SVGILVALALPVLGLKVAMPSIAVVPDDAPVRQGYELVQAQFGDGAPGALQIVVPSSDAA
HHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHH
ATAAAASSVDGISMVTPPTPSTDDSNYTLLQAFPAVDPSAEAMGTILGDLRAQLPESALV
HHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHC
GGAPAENLDLQQALNDYLPLVIGIILALGFILLLVALQVPLIAILGTAVSLLSTAAAFGV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLIFQDGHGSSLLGFTPQGFLDGWGPVFFFAMIFAIAMDYTVFLLATAKEHYEKTGDPK
HHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAQVDGLAHSGRVIFAAAAVMVAVFFTFALSDPLPPKEMGIILGVAVLLDAFLIRLILLP
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VLLRLSGHAAWWAPGWLRRMLPSIRFSH
HHHHHCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]