| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is ycfT [C]
Identifier: 77454667
GI number: 77454667
Start: 97145
End: 98194
Strand: Direct
Name: ycfT [C]
Synonym: pREL1_0100
Alternate gene names: 77454667
Gene position: 97145-98194 (Clockwise)
Preceding gene: 77454666
Following gene: 77454668
Centisome position: 35.77
GC content: 61.9
Gene sequence:
>1050_bases GTGCACCGAATCAACGACGGAACCATCGAACCGAAATCGGGCGATACGGCAGCGCACACAGGGCGGGTGGACTGGGTCGA CCTGGCGAAAGGGATCAGCATCGCGTTGGTCGTCCTCCTGCACAGCACCAACTTTCTCGTCACCCGCGGGTTGGCCGCAG GGATCTGGAACGACATCAACGCTGTTGCGGAACCGATTCGGATGCCCTTGTTCTTCCTCACCGCCGGCCTCTTCGCACAC AAAGTGACATCACTGCCGTGGGCAACGGTGATCCGGCGGCGAGTCCTGCCTCTGGCATACCTCTACCTCATGTGGACGGT TCTGCGCTTCGTGTTCTTCAGCGCCTTTCCGGCCACCGCAGGAACCGACGAAACCTCGAGCCCACTGAACTTGATCACTG CGCTGGTCGTACCGACCAGCGGGTTGTGGTTCCTCTACGCACTCGCGGTGTACACGGTGCTCACGAAAGCACTCGGCGGA ATCGACTATCGAGTCCAACTGCTCGGTGCGATCGCGTTGGCCTTCACCGCTCCCAGCATCGGAGGCGTCGACTGGACCTG GGGAAACATGATGGAACTCTTCCTCTTCTTCCTCGCCGGAGCGCACCTGCAACAGATGATCCGCGCCGCCGCCGCATCGA CGACGATGACACGTCTCGCGCTCTCCGGCACCGCATTCGCGCTCGCGTACGCCCTGCACGTCAATGGGTACATCACCTCG GTCGGCGCCGCGACGATCACCCTGAGCGCCTTGGGTCTGTTCGTCGGCATCACTCTCACATCGCAACTGCAGGCACTGCG GATATTCGCCCCCTTCAGAAAGCTCGGAACACTCACCTTGCCGGTGTACCTCATGCACGAAGTACTTCTCGGCATCATCG TGGTCGCCGCTGTTCACGCCGGCTTCGATTTCACCCGTAACGCGCTGTTGGTGTTCGGCCCCCTCCTGGTAGCCACCGTT GCAGTCGGTGGATCCCTGGCGATTCACGCAGCGCTGACCTCCGCCGGACAACGATGGCTCTTCGTCATGCCGCGCCGGAG CACCTCATGA
Upstream 100 bases:
>100_bases AAACCTACTGTAACGTAAGAGTAAAGTTGTGGCGGGTGTTCGACCGCCGCCAAGTCCATGAGAGTCACGTCCGCCCAACA CCATCGAGGAGAAAGATCCG
Downstream 100 bases:
>100_bases CACCTTCGTCGTACATGTTCCCCCAGCCCCCACGCCGGAAAGCGCAAACGTGACCTCGGCACTGACCATCCTCTCCCAAG CCCTCGTGTACGCCCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein YcfT; Pyridoxal-5-Phosphate-Dependent Protein Subunit Beta; Acyltransferase Putative; Acyltransferase 3 Family Protein; Acyltransferase Family Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MHRINDGTIEPKSGDTAAHTGRVDWVDLAKGISIALVVLLHSTNFLVTRGLAAGIWNDINAVAEPIRMPLFFLTAGLFAH KVTSLPWATVIRRRVLPLAYLYLMWTVLRFVFFSAFPATAGTDETSSPLNLITALVVPTSGLWFLYALAVYTVLTKALGG IDYRVQLLGAIALAFTAPSIGGVDWTWGNMMELFLFFLAGAHLQQMIRAAAASTTMTRLALSGTAFALAYALHVNGYITS VGAATITLSALGLFVGITLTSQLQALRIFAPFRKLGTLTLPVYLMHEVLLGIIVVAAVHAGFDFTRNALLVFGPLLVATV AVGGSLAIHAALTSAGQRWLFVMPRRSTS
Sequences:
>Translated_349_residues MHRINDGTIEPKSGDTAAHTGRVDWVDLAKGISIALVVLLHSTNFLVTRGLAAGIWNDINAVAEPIRMPLFFLTAGLFAH KVTSLPWATVIRRRVLPLAYLYLMWTVLRFVFFSAFPATAGTDETSSPLNLITALVVPTSGLWFLYALAVYTVLTKALGG IDYRVQLLGAIALAFTAPSIGGVDWTWGNMMELFLFFLAGAHLQQMIRAAAASTTMTRLALSGTAFALAYALHVNGYITS VGAATITLSALGLFVGITLTSQLQALRIFAPFRKLGTLTLPVYLMHEVLLGIIVVAAVHAGFDFTRNALLVFGPLLVATV AVGGSLAIHAALTSAGQRWLFVMPRRSTS >Mature_349_residues MHRINDGTIEPKSGDTAAHTGRVDWVDLAKGISIALVVLLHSTNFLVTRGLAAGIWNDINAVAEPIRMPLFFLTAGLFAH KVTSLPWATVIRRRVLPLAYLYLMWTVLRFVFFSAFPATAGTDETSSPLNLITALVVPTSGLWFLYALAVYTVLTKALGG IDYRVQLLGAIALAFTAPSIGGVDWTWGNMMELFLFFLAGAHLQQMIRAAAASTTMTRLALSGTAFALAYALHVNGYITS VGAATITLSALGLFVGITLTSQLQALRIFAPFRKLGTLTLPVYLMHEVLLGIIVVAAVHAGFDFTRNALLVFGPLLVATV AVGGSLAIHAALTSAGQRWLFVMPRRSTS
Specific function: Unknown
COG id: COG4763
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37460; Mature: 37460
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRINDGTIEPKSGDTAAHTGRVDWVDLAKGISIALVVLLHSTNFLVTRGLAAGIWNDIN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVAEPIRMPLFFLTAGLFAHKVTSLPWATVIRRRVLPLAYLYLMWTVLRFVFFSAFPATA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTDETSSPLNLITALVVPTSGLWFLYALAVYTVLTKALGGIDYRVQLLGAIALAFTAPSI CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC GGVDWTWGNMMELFLFFLAGAHLQQMIRAAAASTTMTRLALSGTAFALAYALHVNGYITS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VGAATITLSALGLFVGITLTSQLQALRIFAPFRKLGTLTLPVYLMHEVLLGIIVVAAVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFDFTRNALLVFGPLLVATVAVGGSLAIHAALTSAGQRWLFVMPRRSTS CCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure MHRINDGTIEPKSGDTAAHTGRVDWVDLAKGISIALVVLLHSTNFLVTRGLAAGIWNDIN CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AVAEPIRMPLFFLTAGLFAHKVTSLPWATVIRRRVLPLAYLYLMWTVLRFVFFSAFPATA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTDETSSPLNLITALVVPTSGLWFLYALAVYTVLTKALGGIDYRVQLLGAIALAFTAPSI CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC GGVDWTWGNMMELFLFFLAGAHLQQMIRAAAASTTMTRLALSGTAFALAYALHVNGYITS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VGAATITLSALGLFVGITLTSQLQALRIFAPFRKLGTLTLPVYLMHEVLLGIIVVAAVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFDFTRNALLVFGPLLVATVAVGGSLAIHAALTSAGQRWLFVMPRRSTS CCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA