| Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
|---|---|
| Accession | NC_007491 |
| Length | 271,577 |
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The map label for this gene is 77454643
Identifier: 77454643
GI number: 77454643
Start: 75761
End: 76684
Strand: Direct
Name: 77454643
Synonym: pREL1_0076
Alternate gene names: NA
Gene position: 75761-76684 (Clockwise)
Preceding gene: 77454642
Following gene: 77454644
Centisome position: 27.9
GC content: 62.23
Gene sequence:
>924_bases ATGACTGCCACCCCATCCGACGCCACCGCGCACCAGCACGGCAACGGATCCCTCACCCCCGCAGCGGAACCGGCAACAGG TTTCGACGCCGATAACCTCACAGCCGCAGACGAACTCGCGATCGACATCGGAAGAGTCGCGATCGAAGCCAGTGAAGGTG TCCCCTACGGCTCAGAGCCCGACGAGTTCTTCCTGGCAGCAGGGAAAGCTGTCTTCTACTGGCTACAGCTCAACGGTCAC CGGCGCATCACCACTGAAGAGGCGGAAGAGATACGACAGGTGTCGAATTGCGCGCTTCAGTACGGCAACATCGCCAGCCG AGAAGCCGCCCACAGTCTGCTCGCCCGGTTCCTGGCAACCGAACCCGCCAAGGCGCGTCCCGATATCGGTACGGCAACCG CCGACAATGTCGGCGGTTCAGATGGTTCCGCCCCTGCCGAACCTGCGGAAGAGGAGACGAATGCGAAGGCGGTAACACGG TGCCCGATCTGCTTCGGACTGAATGGGTCTCACAACACGATTCACGAGCGCTACCCGGCCGGCGGCGGCGGAACCAACAA ACCCTGCCCGAACTCCCTGCCAGCCGTTACAGAAGAAGTGAAGACGCACTGCCGGTGCGTCACGCCGGACTGGTACCACG ATGGGCTGGACTCGGATATCGCCGGACGCCTGTGCCGCCGGTGCCGTCTGCGACAGAACATCCCGTACAGGGATCTCGTC AACTCGCCGGTTGCCCGTACCGCAGTGTCAGCGTTCAGTGTCGCTGCACTAGCCCTACGAAACGCCGTGGAAGTACTGGA CCCTCACGAAGGTGGGGATTGGGAGCACGCGTGGCAGACGATTGCAGACCTCGAAGACTGCGCCGGCCGCTTCGAGGCAA GTGAGAGAACGGAAGTGAGGGAAAGTGGTCGAGAAAATCGCTAA
Upstream 100 bases:
>100_bases CGAACTCCTCGACGTCGCTGCATCCACACACCCACAAGGTGACAGCTGCCGCTGACGTGAGGCGAACGAACAAGGCCCAC ATCGAAAGGGGACACCACAG
Downstream 100 bases:
>100_bases GCATGGAAGACACGCTACGAGTCAGGCGAAACTGGGCACGCATGTCCTCAGTCCAGTCGGCCCCGAGAATTTCAGTGAGC ACTACTACGGAGTGCGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTATPSDATAHQHGNGSLTPAAEPATGFDADNLTAADELAIDIGRVAIEASEGVPYGSEPDEFFLAAGKAVFYWLQLNGH RRITTEEAEEIRQVSNCALQYGNIASREAAHSLLARFLATEPAKARPDIGTATADNVGGSDGSAPAEPAEEETNAKAVTR CPICFGLNGSHNTIHERYPAGGGGTNKPCPNSLPAVTEEVKTHCRCVTPDWYHDGLDSDIAGRLCRRCRLRQNIPYRDLV NSPVARTAVSAFSVAALALRNAVEVLDPHEGGDWEHAWQTIADLEDCAGRFEASERTEVRESGRENR
Sequences:
>Translated_307_residues MTATPSDATAHQHGNGSLTPAAEPATGFDADNLTAADELAIDIGRVAIEASEGVPYGSEPDEFFLAAGKAVFYWLQLNGH RRITTEEAEEIRQVSNCALQYGNIASREAAHSLLARFLATEPAKARPDIGTATADNVGGSDGSAPAEPAEEETNAKAVTR CPICFGLNGSHNTIHERYPAGGGGTNKPCPNSLPAVTEEVKTHCRCVTPDWYHDGLDSDIAGRLCRRCRLRQNIPYRDLV NSPVARTAVSAFSVAALALRNAVEVLDPHEGGDWEHAWQTIADLEDCAGRFEASERTEVRESGRENR >Mature_306_residues TATPSDATAHQHGNGSLTPAAEPATGFDADNLTAADELAIDIGRVAIEASEGVPYGSEPDEFFLAAGKAVFYWLQLNGHR RITTEEAEEIRQVSNCALQYGNIASREAAHSLLARFLATEPAKARPDIGTATADNVGGSDGSAPAEPAEEETNAKAVTRC PICFGLNGSHNTIHERYPAGGGGTNKPCPNSLPAVTEEVKTHCRCVTPDWYHDGLDSDIAGRLCRRCRLRQNIPYRDLVN SPVARTAVSAFSVAALALRNAVEVLDPHEGGDWEHAWQTIADLEDCAGRFEASERTEVRESGRENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32934; Mature: 32803
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPSDATAHQHGNGSLTPAAEPATGFDADNLTAADELAIDIGRVAIEASEGVPYGSEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCC DEFFLAAGKAVFYWLQLNGHRRITTEEAEEIRQVSNCALQYGNIASREAAHSLLARFLAT CHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC EPAKARPDIGTATADNVGGSDGSAPAEPAEEETNAKAVTRCPICFGLNGSHNTIHERYPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCEEEECCCCCCCHHHHCCC GGGGTNKPCPNSLPAVTEEVKTHCRCVTPDWYHDGLDSDIAGRLCRRCRLRQNIPYRDLV CCCCCCCCCCCCCHHHHHHHHHHEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH NSPVARTAVSAFSVAALALRNAVEVLDPHEGGDWEHAWQTIADLEDCAGRFEASERTEVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ESGRENR HCCCCCC >Mature Secondary Structure TATPSDATAHQHGNGSLTPAAEPATGFDADNLTAADELAIDIGRVAIEASEGVPYGSEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCC DEFFLAAGKAVFYWLQLNGHRRITTEEAEEIRQVSNCALQYGNIASREAAHSLLARFLAT CHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC EPAKARPDIGTATADNVGGSDGSAPAEPAEEETNAKAVTRCPICFGLNGSHNTIHERYPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCEEEECCCCCCCHHHHCCC GGGGTNKPCPNSLPAVTEEVKTHCRCVTPDWYHDGLDSDIAGRLCRRCRLRQNIPYRDLV CCCCCCCCCCCCCHHHHHHHHHHEEECCCCHHHCCCCHHHHHHHHHHHHHHCCCCHHHHH NSPVARTAVSAFSVAALALRNAVEVLDPHEGGDWEHAWQTIADLEDCAGRFEASERTEVR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ESGRENR HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA