Definition | Burkholderia pseudomallei 1710b chromosome chromosome II, complete sequence. |
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Accession | NC_007435 |
Length | 3,181,762 |
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The map label for this gene is fecR [H]
Identifier: 76817882
GI number: 76817882
Start: 39988
End: 40992
Strand: Direct
Name: fecR [H]
Synonym: BURPS1710b_A0019
Alternate gene names: 76817882
Gene position: 39988-40992 (Clockwise)
Preceding gene: 76817390
Following gene: 76817400
Centisome position: 1.26
GC content: 77.31
Gene sequence:
>1005_bases ATGAGCGGCGCAAAGCCGGCGGGCGGCCCGCCCGCGGTGCCCGAGCGCGTCGCGCGGCGTGCGGTCCAATGGTGGGTCGA GCTCGGCGCCGCGCCCGCGAGCGACGCGACGCGCGCGCGCCTCGCGCGCTGGCGCGCCGAGCACCCGGCGCACGACGCGG CGTGGCGGCACATCGAGGCCGTCAACGGGCGGCTCGGCCATGTCGCGAGCGCGCTGAGCGCGCGGGCGGCCCGCGCCGCG CTGCTGCCGCCGCGCTCGCGCGGGCGGCGCGCGGCGCTCAAGGCGCTCGCGGTGCTGCTGTTCGCGGGCGGCGGCGCGTG GACGGGGCAGGCGTACCTGCCGTGGCGCGCGTGGGGCGCGGACGTGCGCACGGCGCTCGGCGAGCGGCGCACGATCACGC TCGCCGATGGCACGACGGTCGTCCTGAACACCGATACCGCGATCGACATCCGCTTCGACGACGCGACGCGCGGCGTGCGC CTGCTGCGCGGCGAAATCATGGTGACGAGCGGCCGCGACGCGGCGCGCGCGGTGCCCCGAGCGCTCGTGATCGCGACCGC GCACGGCGACGTGCGGCCGGTCGGCACGCGCTTCTCGGTGCGCGAGCGCGGCGATGCGACGCGCGTCGACGTGTTCGACG GCGCGGTGCGGATCGCGCCTCGGCGCGCGGTGGGCCGCGCGCCATTGATCACGGCGGGCCACGGCGCGGATTTCACGCGC GACGCGCTCGCCGGGCCGCCGCGTGTGCTCGGGGCGAGCGCCGGCGCGTGGGTGGACGGCATCCTCGTCGCGTCGAACCT GCGGCTCGCCGATCTGCTCGCCGAAATCGACCGCTACCGCCCGGGCCGCGTGCGCTGCGACGCGGCGGTCGCGAATCTGC GCGTATCCGGCACGTACCCGCTCGACGACACCGACCGCATCCTCGACACGCTGCGCGAGACGCTGCCCGTCGATGTCGAG TACCTGAGCCGCTACTGGGTGACCGTCGTCGCGGCGCGCGATTGA
Upstream 100 bases:
>100_bases TGACGCACGCGCAGATCGCGGCCGAGCTGCGCGTGTCGCTCGCGACCGTCAAGCGCTACCTGGTGAAAGCGGGCGCGCAG TGCTACTTCGCGATCGCCGC
Downstream 100 bases:
>100_bases GCGCGATTGCGCACGCGCGCCGCATGCCTCATCGAAATTTTTTCGCCGGGCCTGAGCTGTTTTCGATGCTCGCGTGACAT GGGAAATGAAGGCTGCATTC
Product: FecR family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASALSARAARAA LLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVR LLRGEIMVTSGRDAARAVPRALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTR DALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDTLRETLPVDVE YLSRYWVTVVAARD
Sequences:
>Translated_334_residues MSGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASALSARAARAA LLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVR LLRGEIMVTSGRDAARAVPRALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTR DALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDTLRETLPVDVE YLSRYWVTVVAARD >Mature_333_residues SGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASALSARAARAAL LPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVRL LRGEIMVTSGRDAARAVPRALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTRD ALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDTLRETLPVDVEY LSRYWVTVVAARD
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=311, Percent_Identity=32.7974276527331, Blast_Score=164, Evalue=8e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 35785; Mature: 35654
Theoretical pI: Translated: 11.61; Mature: 11.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH VNGRLGHVASALSARAARAALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGA HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHCCH DVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPR HHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCHHCCEEEECEEEEECCCHHHHHCCE ALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTR EEEEEECCCCCCCCCCEEEHHHCCCCCEEEEECCEEEECCHHHCCCCCEEEECCCCCCCH DALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYP HHHCCCCCEECCCCCCHHHHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCC LDDTDRILDTLRETLPVDVEYLSRYWVTVVAARD CCCHHHHHHHHHHHCCCCHHHHHCEEEEEEEECC >Mature Secondary Structure SGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEA CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH VNGRLGHVASALSARAARAALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGA HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHCCH DVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPR HHHHHCCCCEEEEEECCEEEEEECCCEEEEEECCCHHCCEEEECEEEEECCCHHHHHCCE ALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTR EEEEEECCCCCCCCCCEEEHHHCCCCCEEEEECCEEEECCHHHCCCCCEEEECCCCCCCH DALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYP HHHCCCCCEECCCCCCHHHHHHEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCC LDDTDRILDTLRETLPVDVEYLSRYWVTVVAARD CCCHHHHHHHHHHHCCCCHHHHHCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]