| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674372
Identifier: 75674372
GI number: 75674372
Start: 198986
End: 199669
Strand: Direct
Name: 75674372
Synonym: Nwi_0173
Alternate gene names: NA
Gene position: 198986-199669 (Clockwise)
Preceding gene: 75674371
Following gene: 75674373
Centisome position: 5.85
GC content: 62.28
Gene sequence:
>684_bases ATGATTTCGGCCGTGCAGAATCGTCGCCGCTTTTTTTTGCCGGCCTTCCGCATGGCGGTCCTGCTGCGCGGCGGCGTGGT CGCCGTCGCTTTGATGGCGGCCGGTGAAGCGGCCGCGCAAAGCACGGTGCAGGGTGTTCCTAACGCGATGCAGGGCTTCT CGCAGAATCGCGATCAGCCGATCCAGATCGAGGCCGCTACGCTCGAGATGCGCGACAAAAAAAAGGAGGCGACCTTCTCC GGCAATGTCAAGGTGGTGCAGGGCGACACCACGATGACGTCAAAGACGCTCGTCGTCTATTATCAGAGCAGCGATACGGC CAAGGGCGGCGCGCCGTCGAAGAAAAAACCCGCCGCCGTGGCGGCGCCGGCGCCATCGGGCGCGTCCTCGATCAAGCGGC TGGAGGCGAGGGGCAACGTGGTTGTGACCCAGAAGGATCAGGTCGTCACAGGCGATACCGCCGTGTTCGATACCACGACC AATCTGATCACGATGCAGGGCAAGGTCGTATTGACCCAGTGCAAGAACGTGTTGCGGGGGGATCGCCTTCTGGTCGATAT GACCACAGGGGTCTCGCGAGTGGAATCCAATAGCGGCAGGGTCCAGGGTCTCTTCATCCAGGGCGACCAGGATTGCGCTT CCCCGGGGCCGGCCATCCCCCTTGCCCCTAAAAAACCCAGGTAA
Upstream 100 bases:
>100_bases TCACCGAAAAGGGCGACGTGGTGCGATTTGAGAACAATGTCGTCATGCACCTGGTGATGGATCGTGCTCCCGCAGATGCC GGCACGGGCGGTGATAAGGA
Downstream 100 bases:
>100_bases CTTCGTGGTGTCCCGCCGGTCTGAGGGCGGGACTCCGATACTGACATTCGCAACAGGGTTCGTCGAATGGGATGCGAATG TGATAGCGTTTTCGAGCGAA
Product: OstA-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR
Sequences:
>Translated_227_residues MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR >Mature_227_residues MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005653 [H]
Pfam domain/function: PF03968 OstA [H]
EC number: NA
Molecular weight: Translated: 23992; Mature: 23992
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQP CCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCC IQIEAATLEMRDKKKEATFSGNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAV EEEEEEEEEEHHCCCCCEECCCEEEEECCCEECCEEEEEEECCCCCCCCCCCCCCCCCEE AAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTTNLITMQGKVVLTQCKNVLRG ECCCCCCHHHHHHHHCCCCEEEEECCCEEECCEEEEECCCCEEEECCCEEEHHHHHHHCC DRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR CEEEEEECCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQP CCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCC IQIEAATLEMRDKKKEATFSGNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAV EEEEEEEEEEHHCCCCCEECCCEEEEECCCEECCEEEEEEECCCCCCCCCCCCCCCCCEE AAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTTNLITMQGKVVLTQCKNVLRG ECCCCCCHHHHHHHHCCCCEEEEECCCEEECCEEEEECCCCEEEECCCEEEHHHHHHHCC DRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR CEEEEEECCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430; 2703463 [H]