Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75674372

Identifier: 75674372

GI number: 75674372

Start: 198986

End: 199669

Strand: Direct

Name: 75674372

Synonym: Nwi_0173

Alternate gene names: NA

Gene position: 198986-199669 (Clockwise)

Preceding gene: 75674371

Following gene: 75674373

Centisome position: 5.85

GC content: 62.28

Gene sequence:

>684_bases
ATGATTTCGGCCGTGCAGAATCGTCGCCGCTTTTTTTTGCCGGCCTTCCGCATGGCGGTCCTGCTGCGCGGCGGCGTGGT
CGCCGTCGCTTTGATGGCGGCCGGTGAAGCGGCCGCGCAAAGCACGGTGCAGGGTGTTCCTAACGCGATGCAGGGCTTCT
CGCAGAATCGCGATCAGCCGATCCAGATCGAGGCCGCTACGCTCGAGATGCGCGACAAAAAAAAGGAGGCGACCTTCTCC
GGCAATGTCAAGGTGGTGCAGGGCGACACCACGATGACGTCAAAGACGCTCGTCGTCTATTATCAGAGCAGCGATACGGC
CAAGGGCGGCGCGCCGTCGAAGAAAAAACCCGCCGCCGTGGCGGCGCCGGCGCCATCGGGCGCGTCCTCGATCAAGCGGC
TGGAGGCGAGGGGCAACGTGGTTGTGACCCAGAAGGATCAGGTCGTCACAGGCGATACCGCCGTGTTCGATACCACGACC
AATCTGATCACGATGCAGGGCAAGGTCGTATTGACCCAGTGCAAGAACGTGTTGCGGGGGGATCGCCTTCTGGTCGATAT
GACCACAGGGGTCTCGCGAGTGGAATCCAATAGCGGCAGGGTCCAGGGTCTCTTCATCCAGGGCGACCAGGATTGCGCTT
CCCCGGGGCCGGCCATCCCCCTTGCCCCTAAAAAACCCAGGTAA

Upstream 100 bases:

>100_bases
TCACCGAAAAGGGCGACGTGGTGCGATTTGAGAACAATGTCGTCATGCACCTGGTGATGGATCGTGCTCCCGCAGATGCC
GGCACGGGCGGTGATAAGGA

Downstream 100 bases:

>100_bases
CTTCGTGGTGTCCCGCCGGTCTGAGGGCGGGACTCCGATACTGACATTCGCAACAGGGTTCGTCGAATGGGATGCGAATG
TGATAGCGTTTTCGAGCGAA

Product: OstA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS
GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT
NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR

Sequences:

>Translated_227_residues
MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS
GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT
NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR
>Mature_227_residues
MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQPIQIEAATLEMRDKKKEATFS
GNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAVAAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTT
NLITMQGKVVLTQCKNVLRGDRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR

Specific function: Unknown

COG id: COG1934

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005653 [H]

Pfam domain/function: PF03968 OstA [H]

EC number: NA

Molecular weight: Translated: 23992; Mature: 23992

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQP
CCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCC
IQIEAATLEMRDKKKEATFSGNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAV
EEEEEEEEEEHHCCCCCEECCCEEEEECCCEECCEEEEEEECCCCCCCCCCCCCCCCCEE
AAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTTNLITMQGKVVLTQCKNVLRG
ECCCCCCHHHHHHHHCCCCEEEEECCCEEECCEEEEECCCCEEEECCCEEEHHHHHHHCC
DRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR
CEEEEEECCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MISAVQNRRRFFLPAFRMAVLLRGGVVAVALMAAGEAAAQSTVQGVPNAMQGFSQNRDQP
CCCCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCC
IQIEAATLEMRDKKKEATFSGNVKVVQGDTTMTSKTLVVYYQSSDTAKGGAPSKKKPAAV
EEEEEEEEEEHHCCCCCEECCCEEEEECCCEECCEEEEEEECCCCCCCCCCCCCCCCCEE
AAPAPSGASSIKRLEARGNVVVTQKDQVVTGDTAVFDTTTNLITMQGKVVLTQCKNVLRG
ECCCCCCHHHHHHHHCCCCEEEEECCCEEECCEEEEECCCCEEEECCCEEEHHHHHHHCC
DRLLVDMTTGVSRVESNSGRVQGLFIQGDQDCASPGPAIPLAPKKPR
CEEEEEECCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 2703463 [H]