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The map label for this gene is holA

Identifier: 75674292

GI number: 75674292

Start: 110384

End: 111412

Strand: Direct

Name: holA

Synonym: Nwi_0093

Alternate gene names: NA

Gene position: 110384-111412 (Clockwise)

Preceding gene: 75674291

Following gene: 75674298

Centisome position: 3.24

GC content: 68.03

Gene sequence:

>1029_bases
ATGGTCGCGCTGCGCGGAAAGGACATCGACGGCTTTCTCGCCCGGCCCGATCCGGCCCGGCCGATCATCCTGCTCTACGG
TCCCGACGCCGGCCTGGTGCGCGAGCGCGCCAACGCGCTGATAAGCTCGGCCGTCGAGGATCCGAACGATCCGTTTTCGT
TAGTCCGGCTCGACGGCGACGATCTCGCCGCCGAGCCCTCGCGTCTGGTCGACGAGGCGATGACGGTGCCGCTGTTGGGC
GGCCGCCGCGCCATCCGGATCAAGGCGGGGTCACGCAGCTTCGCGAGCGGCGTCGATACGCTGGCGAATTCCACCATCCA
GGATTGCCGGATCGTGATCGAGGCCGGCGAACTGAGGCCGGAATCGCCGCTGCGCAAGGCCTGCGAGCGGGCGAAGAACG
CGGTGGCGATCGCCTGCTATCCCGACACCGAACGCGATCTGGCGCGGCTGATCGACGAGGAGTTGCGCGCCTCCGACCTG
AAGATCGCGCCCGACGCCCGCGCGGCGCTGATGTCGCTGCTCGGCGGCGACCGTCAGGCCTCGCGCAACGAACTGCGCAA
GATCGCCCTCTATGCCCATGGACAAGGCGAGATCACGCTCCTCGATGTCATGGCCGTGGTCTCCGACGCATCCGACTTCA
AGCTCGATCCCGTCATCGACGCCGCCTTCGCCGGCCGGCCGGCGGCGGTCGAAGCCGAATTCGCCAAGGCCATGGTCGCG
GGCACCTATCCGGGCCTCGTCATCTCGGCCGCGCAGCGTTTTGTCGCCGCCCTGCACAAGGCCGCGCTTTTGATGGAAGA
AGGCGCGTCGGCCTCATCAGCCACTGAGCGCGGATTTCCGCGCCTGCATTTTTCGCGCAAGGCGTCCGTGGAAACGGCGT
TGAGCCATTTCAGCGCCCCGCGGCTGGTTCAGGTGATGGACCAGCTCGCCCGCGCCGCATTGGAAACCCGCAAGCAGGCA
GCGCTGGCGTCGGCGATCACGCAGCGCGCCCTGATGTCGATCGCGGTGAATGCGCGGCGGAGAGGATAG

Upstream 100 bases:

>100_bases
GCCTACCGCGACGCGGAGGACCGCGCCGCCGAGCAGATCGCCGAGAACATCAACACCCGGCTGGCCTCGTTCTTCTACGC
CGGCACCTGATCGCCGGCGA

Downstream 100 bases:

>100_bases
AGTTGATACGAAGCGCCTGCTCCTCCCCATCGTCCCGCTCTTGCGGCGAGAGGTGAAACAAGCTCGGGTCACCCCTTCGG
ATCCAGCCTTTTCAGAATCT

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit; DNA Polymerase III Delta; DNA Polymerase II

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGDDLAAEPSRLVDEAMTVPLLG
GRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRPESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDL
KIAPDARAALMSLLGGDRQASRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA
GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAPRLVQVMDQLARAALETRKQA
ALASAITQRALMSIAVNARRRG

Sequences:

>Translated_342_residues
MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGDDLAAEPSRLVDEAMTVPLLG
GRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRPESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDL
KIAPDARAALMSLLGGDRQASRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA
GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAPRLVQVMDQLARAALETRKQA
ALASAITQRALMSIAVNARRRG
>Mature_342_residues
MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGDDLAAEPSRLVDEAMTVPLLG
GRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRPESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDL
KIAPDARAALMSLLGGDRQASRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA
GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAPRLVQVMDQLARAALETRKQA
ALASAITQRALMSIAVNARRRG

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 36543; Mature: 36543

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGD
CCEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
DLAAEPSRLVDEAMTVPLLGGRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRP
CCCCCHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHHCHHHHHEEEEECCCCCC
ESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDLKIAPDARAALMSLLGGDRQA
CCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHH
SRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA
HHHHHHEEEEEECCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCHHHHHHHHHHHCCCC
RLVQVMDQLARAALETRKQAALASAITQRALMSIAVNARRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVALRGKDIDGFLARPDPARPIILLYGPDAGLVRERANALISSAVEDPNDPFSLVRLDGD
CCEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
DLAAEPSRLVDEAMTVPLLGGRRAIRIKAGSRSFASGVDTLANSTIQDCRIVIEAGELRP
CCCCCHHHHHHHHHCCCEECCCEEEEEECCCCHHHHHHHHHHHCHHHHHEEEEECCCCCC
ESPLRKACERAKNAVAIACYPDTERDLARLIDEELRASDLKIAPDARAALMSLLGGDRQA
CCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHCCCCHH
SRNELRKIALYAHGQGEITLLDVMAVVSDASDFKLDPVIDAAFAGRPAAVEAEFAKAMVA
HHHHHHEEEEEECCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
GTYPGLVISAAQRFVAALHKAALLMEEGASASSATERGFPRLHFSRKASVETALSHFSAP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEECCHHHHHHHHHHHCCCC
RLVQVMDQLARAALETRKQAALASAITQRALMSIAVNARRRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA