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The map label for this gene is ycaR [C]

Identifier: 75674274

GI number: 75674274

Start: 89704

End: 89904

Strand: Direct

Name: ycaR [C]

Synonym: Nwi_0075

Alternate gene names: 75674274

Gene position: 89704-89904 (Clockwise)

Preceding gene: 75674273

Following gene: 75674276

Centisome position: 2.64

GC content: 59.7

Gene sequence:

>201_bases
ATGACACCGCCTCACTCCGATCGTCCCGAAGATACCGCCGATCCAAAGCTTTTGGAGATTCTAGTCTGCCCGGTCACCAA
GGGTCCGCTGGAACTGGACGGCGCGCGGCGGGAATTGATTTCACGCTCGGCGAAGCTGGCCTATCCGATCCGCGACGGCA
TTCCGATCATGCTGCCGGAAGAGGCAAGGAAGATCGAGTGA

Upstream 100 bases:

>100_bases
CGCCGTCACCGAAATGGACCTCGCGAAGAAGCGCACCAGCGGCGACCCCGGATTGCAGTAGACAGGCAAGCGCCTGACCT
GACCTCTCGAAGAGACCCGC

Downstream 100 bases:

>100_bases
GACGATGCACGTCGCGTCGTTTCAAAAAAATTATCTCGCAACAACAAGCGTAACAAATCGTCATAGCGCGTCGCTGTCGG
TCTCGCCGGTGCGGATGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MTPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPEEARKIE

Sequences:

>Translated_66_residues
MTPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPEEARKIE
>Mature_65_residues
TPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPEEARKIE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y075_NITWN (Q3SWJ8)

Other databases:

- EMBL:   CP000115
- RefSeq:   YP_316695.1
- ProteinModelPortal:   Q3SWJ8
- SMR:   Q3SWJ8
- STRING:   Q3SWJ8
- GeneID:   3675634
- GenomeReviews:   CP000115_GR
- KEGG:   nwi:Nwi_0075
- NMPDR:   fig|323098.3.peg.73
- eggNOG:   COG2835
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- PhylomeDB:   Q3SWJ8
- BioCyc:   NWIN323098:NWI_0075-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7361; Mature: 7229

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPE
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECC
EARKIE
CCCCCC
>Mature Secondary Structure 
TPPHSDRPEDTADPKLLEILVCPVTKGPLELDGARRELISRSAKLAYPIRDGIPIMLPE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECC
EARKIE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA