| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is katG
Identifier: 75674229
GI number: 75674229
Start: 33243
End: 35432
Strand: Direct
Name: katG
Synonym: Nwi_0030
Alternate gene names: 75674229
Gene position: 33243-35432 (Clockwise)
Preceding gene: 75674227
Following gene: 75674230
Centisome position: 0.98
GC content: 65.3
Gene sequence:
>2190_bases ATGGACGCAAAGACAAATGACGGAAAAGCGGGTCAATGCCCGTTCACGAGCGGTCGCGGACACAAGAATCGCGACTGGTG GCCGGAGCAGCTCGATGTTCAGGTCCTTCATCAGAAATCAAACCTGTCCAACCCGATGGGCCGGGACTTCGACTACGCCA GCGCGTTCGCAAGCCTCGACCTGAACGCCGTCATCGCCGATCTGAAGGCGCTGATGACGGATTCGCAGGACTGGTGGCCG GCCGATTTCGGCCACTACGGCGGACTGATGGTCCGCATGGCATGGCATAGCGCGGGCACCTATCGCATCACCGACGGCCG CGGCGGCGCCGGTGGCGGCCAGCAGCGTTTCGCGCCGCTGAACTCCTGGCCGGACAACGTGCTGCTCGACCGGGCGCGCC GCCTGTTGTGGCCGATCAAGCAGAAGTACGGCCGCAAGATTTCCTGGGCCGACCTTTATGTCCTCGCGGGCAATGCCGCG CTGGAATCGATGGGTTTCAAGCCCTTGGGCTTCGCCGGCGGCCGTGTCGACGAATGGGAGCCGCAGGAATTGTTCTGGGG TCCGGAAGGCGCCTGGCTCGGCGACGAGCGCTACAGCGGCGAACGTGAGCTGGCGGAGCCGCTCGCCGCGGTGCAGATGG GCCTGATCTACGTCAATCCGGAAGGGCCGAACGGCCAACCGGACCCGCTCGCTGCCGCCAAGGATATCCGCGAGACATTT CTCCGCATGGCGATGAATGACGAAGAAACCGTCGCGCTGATCGCGGGCGGCCACACCTTCGGCAAGACCCACGGCGCCGG CGACGCGTCGCTGGTCGGACCGGTGCCGGACTCCGCCCCGATCGAGGATCAGGGACTCGGCTGGAAGGGCCGGTTCGGCA CGGGCAAGGGGGCTGACGCAATCGGCAGCGGCCTGGAAGTGACCTGGACCCAGACGCCGACCAAGTGGGACAACAACTTC TTCGACACGCTGTTCGGGTTCGAATGGGAGCTGACCAAGAGCCCTGCCGGCGCGCACCAGTGGAGGGCGAAGGACGCTCC GGCCATCACCCCGGACCCCTTCGACGAGTCGAAGAAGCACGTGCCGACCATGCTGACGACGGATCTGTCGCTGCGCTTCG ATCCTATCTACGGCGAAATCTCGAAGCGCTTCCATGAGAATCCCGACCAGTTTGCGGACGCCTTCGCCCGCGCCTGGTTC AAGCTGACCCATCGCGACATGGGACCCCGCGACCGCTATCTCGGCCCGCTGGTGCCAAAGGAAGTGATGATCTGGCAGGA TCCGATCCCGGCCGTGGACCATGAGTTGGTCGACGACAACGACATCGCCGACCTGAAGGCGAAAATCCTCGCCTCCGGCT GCACCGTGGCGCAGCTGGTCTCGACCGCCTGGGCCTCGGCCTCCACCTTCCGCGGCTCCGACAAGCGCGGCGGCGCCAAT GGGGCGCGCATCCGGCTTGCCCCGCAGAAGGATTGGGAGGTCAACCAGCCGATCCAGCTGAAAGCGGTGCTGGCGAAGCT CGAAGAGATCCAGGCCGAATTCAATGACGCGCAGACAGGCGGCAAAAAGGTCTCGCTCGCCGACCTGATCGTGCTCGGCG GATCGGCCGCGGTCGAGAAGGCGGCCAGAGACGCCGGGATCGACTTGAAGGTGCCATTCACGCCCGGCCGCATGGATGCG TCGCTGGACCAGACCGACGTGGAATCCTTCGCGCCGCTTGAGCCGCGCGCGGATGGCTTCCGCAACTACATCAGCGACAG GCACCAGTTCATGGCGCCCGAGGAGGCGCTGGTGGATCGCGCGCAACTGCTGAACCTGACCGGACCGGAGATGACGGTTC TCGTCGGCGGCCTGCGCGTGCTGGGCGCCAATGCCGCAGACTCTAGGCATGGCGTCTTCACCACCCGCCCGGGCAAGCTG ACGAACGACTTCTTTGTCAACCTGCTCACCATGGATACCGAGTGGCAACCGGTCGCCGGTCAGGACGGCGTTTACGAAAG CCGCGACCGCAAGACCGGCACGCTGAAGTGGACGGGCACGCGCGTCGACCTGATCTTCGGCTCGCACTCCCAGCTCCGCG CATTCGCGGAAGTCTATGCGTGCGCAGACTCCGGCGAGAAGTTCGCGAACGACTTCGCCGCCGCATGGGCCAAGGTCATG AACGCCGATCGCTTCGATCTCAAGGCCTGA
Upstream 100 bases:
>100_bases CGAGCATAGCTCCACGTCGATCACTCCCTCGGTGAACCGCGGCTTCTGAATGGCGATGGCGGCCGACCGGCAACGCGACA GCATGGCATCGGAGACAATC
Downstream 100 bases:
>100_bases TCGCGACAACACACCTCAACGCCATAGCCCCTGCGATTTCCCGCAGGGGCTTTTCCATGAGAGCATGATATTTGAGAGCG GGATGCGGGCGGAAAACCGC
Product: haem catalase/peroxidase
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLDLNAVIADLKALMTDSQDWWP ADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAA LESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNF FDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKHVPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWF KLTHRDMGPRDRYLGPLVPKEVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEKAARDAGIDLKVPFTPGRMDA SLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDRAQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKL TNDFFVNLLTMDTEWQPVAGQDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM NADRFDLKA
Sequences:
>Translated_729_residues MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLDLNAVIADLKALMTDSQDWWP ADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAA LESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNF FDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKHVPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWF KLTHRDMGPRDRYLGPLVPKEVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEKAARDAGIDLKVPFTPGRMDA SLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDRAQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKL TNDFFVNLLTMDTEWQPVAGQDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM NADRFDLKA >Mature_729_residues MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLDLNAVIADLKALMTDSQDWWP ADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPLNSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAA LESMGFKPLGFAGGRVDEWEPQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADAIGSGLEVTWTQTPTKWDNNF FDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKHVPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWF KLTHRDMGPRDRYLGPLVPKEVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEKAARDAGIDLKVPFTPGRMDA SLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDRAQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKL TNDFFVNLLTMDTEWQPVAGQDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM NADRFDLKA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=730, Percent_Identity=61.2328767123288, Blast_Score=846, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_NITWN (Q3SWP3)
Other databases:
- EMBL: CP000115 - RefSeq: YP_316650.1 - HSSP: Q50555 - ProteinModelPortal: Q3SWP3 - SMR: Q3SWP3 - STRING: Q3SWP3 - PeroxiBase: 3657 - GeneID: 3675153 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_0030 - NMPDR: fig|323098.3.peg.27 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: FEWELTK - PhylomeDB: Q3SWP3 - ProtClustDB: PRK15061 - BioCyc: NWIN323098:NWI_0030-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80042; Mature: 80042
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 96-96
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC LNAVIADLKALMTDSQDWWPADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPL HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC NSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAALESMGFKPLGFAGGRVDEWE CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCC PQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF CHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHH LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADA HHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHH IGSGLEVTWTQTPTKWDNNFFDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKH HCCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHC VPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWFKLTHRDMGPRDRYLGPLVPK CCEEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC EVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN CEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCC GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEK CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHH AARDAGIDLKVPFTPGRMDASLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDR HHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH AQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKLTNDFFVNLLTMDTEWQPVAG HHHHCCCCCCEEEEECCHHEECCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCC QDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM CCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NADRFDLKA CCCCCCCCC >Mature Secondary Structure MDAKTNDGKAGQCPFTSGRGHKNRDWWPEQLDVQVLHQKSNLSNPMGRDFDYASAFASLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC LNAVIADLKALMTDSQDWWPADFGHYGGLMVRMAWHSAGTYRITDGRGGAGGGQQRFAPL HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC NSWPDNVLLDRARRLLWPIKQKYGRKISWADLYVLAGNAALESMGFKPLGFAGGRVDEWE CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCC PQELFWGPEGAWLGDERYSGERELAEPLAAVQMGLIYVNPEGPNGQPDPLAAAKDIRETF CHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHH LRMAMNDEETVALIAGGHTFGKTHGAGDASLVGPVPDSAPIEDQGLGWKGRFGTGKGADA HHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHH IGSGLEVTWTQTPTKWDNNFFDTLFGFEWELTKSPAGAHQWRAKDAPAITPDPFDESKKH HCCCCEEEEECCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHC VPTMLTTDLSLRFDPIYGEISKRFHENPDQFADAFARAWFKLTHRDMGPRDRYLGPLVPK CCEEEEECCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC EVMIWQDPIPAVDHELVDDNDIADLKAKILASGCTVAQLVSTAWASASTFRGSDKRGGAN CEEEECCCCCCCCHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCC GARIRLAPQKDWEVNQPIQLKAVLAKLEEIQAEFNDAQTGGKKVSLADLIVLGGSAAVEK CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHH AARDAGIDLKVPFTPGRMDASLDQTDVESFAPLEPRADGFRNYISDRHQFMAPEEALVDR HHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH AQLLNLTGPEMTVLVGGLRVLGANAADSRHGVFTTRPGKLTNDFFVNLLTMDTEWQPVAG HHHHCCCCCCEEEEECCHHEECCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCC QDGVYESRDRKTGTLKWTGTRVDLIFGSHSQLRAFAEVYACADSGEKFANDFAAAWAKVM CCCCCCCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NADRFDLKA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA