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The map label for this gene is petB [H]

Identifier: 73542776

GI number: 73542776

Start: 3403494

End: 3404897

Strand: Reverse

Name: petB [H]

Synonym: Reut_A3092

Alternate gene names: 73542776

Gene position: 3404897-3403494 (Counterclockwise)

Preceding gene: 73542777

Following gene: 73542775

Centisome position: 89.45

GC content: 61.4

Gene sequence:

>1404_bases
ATGGCGGCCGAAAAGCAAGTCAAGACAACCGGTCTGCTGGGCTGGATCGACGCCCGCTTCCCCGCCACACAGCTTTGGGA
AGACCATCTCTCGAAGTATTACGCGCCGAAGAACTTCAACTTCTGGTACTTCTTCGGCTCGCTCGCACTGCTGGTGCTGG
TGATCCAGATCGTCACCGGTATCTTCCTGGTGATGAACTACAAGCCGGACGGCACGCTCAACTCCGCCGGTATTCCCGTG
GCTTTCGCCAGCGTGGAATACATCATGCGCGAAGTCCCGTGGGGCTGGCTGGTGCGCTACATGCATTCGACCGGCGCCTC
GGCGTTCTTCGTCGTGGTGTACCTGCACATGTTCCGCGGACTGCTGTACGGTTCGTACCGCAAGCCGCGTGAGCTGGTCT
GGATCTTCGGTTGCCTGATCTTTCTGTGCCTGATGGCCGAAGCGTTCATGGGCTATCTGCTGCCATGGGGCCAGATGTCG
TACTGGGGCGCGCAGGTGATCGTGAACCTGTTCTCGGCCATCCCCGTGATCGGCCAGGACCTGTCGCTGTTCATCCGCGG
CGACTACGTCGTGAGCGATGCCACGCTGAACCGCTTCTTCTCGTTCCACGTGATCGCGGTGCCGCTGGTGCTGCTGGCGC
TGGTCGTTGCACACATCATCGCGCTGCACGAAGTAGGCTCCAACAACCCGGACGGCGTCGAGATCAAGGCGAAGAAGGAC
GAGAATGGCATCCCGCTGGACGGCATTCCGTTCCACCCGTACTACTCGGTCCACGACACGCTCGGTGTGGCCGGCTTCCT
GGTGATCTTCTCGGCCGTGATCTTTTTCTTCCCGGAAGTGGGCGGCTATTTCCTGGAAGCGAACAACTTCTTCCCGGCTG
ATCCGCTCAAGACTCCGCCGCACATCGCGCCGGTGTGGTACTTCACGCCGTTCTACTCGATGCTGCGTGCGACCACGTCG
AACTTCCTGCCGATCCTGTGGGTGTTCTTCGCACTGGTGCTGGGCATGTTGTTCGTGCGCAGCAAGGACGCGCGCATCAA
GGCTGCGTCGATCGCCATTGCCGTGATCCTCGCAGTCGGCTTCTACTTCATCGACGCCAAGTTCTGGGGCGTGCTGGTGA
TGGGCGGCTCGGTGGTCGTGCTGTTCTTCATGCCGTGGCTCGACTGCTCGCCGGTCAAGTCCATCCGCTATCGTCCCGCT
TTCCACAAGACGATCCTGATCGTCTTCGTGGTGGTGTTCCTGGTCCTCGGCTACCTCGGCGTGCAACCGCCGTCGCCGGT
GGGTGAGAAGGTGTCGCAGCTCGGCACGCTGCTGTACTTCGCCTTCTTCCTGACCATGCCGCTGTGGAGCCGCGCCGGCG
AGTTCAAGCCGGTGCCGGAGCGCGTCACGTTCCATCCGCACTGA

Upstream 100 bases:

>100_bases
AGAACAAGCCGGCGCCGCAGAATCTCGATGTTCCCCCGTACCAGTTCCTGACCGACACCAAGATCGTGATCGGCAAGGAC
GAAAAAGGAGAAGCTTGATC

Downstream 100 bases:

>100_bases
GCGAACGCGCGAACCCCGACAAGAGGACAAGGACACACGATGAAAAAGCTGCTTTCCATCATTGCGCTGGCAGGCGCCTG
CTTTGCCGCCGCGCCCGTCA

Product: cytochrome b/b6, N-terminal

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAAEKQVKTTGLLGWIDARFPATQLWEDHLSKYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNSAGIPV
AFASVEYIMREVPWGWLVRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMS
YWGAQVIVNLFSAIPVIGQDLSLFIRGDYVVSDATLNRFFSFHVIAVPLVLLALVVAHIIALHEVGSNNPDGVEIKAKKD
ENGIPLDGIPFHPYYSVHDTLGVAGFLVIFSAVIFFFPEVGGYFLEANNFFPADPLKTPPHIAPVWYFTPFYSMLRATTS
NFLPILWVFFALVLGMLFVRSKDARIKAASIAIAVILAVGFYFIDAKFWGVLVMGGSVVVLFFMPWLDCSPVKSIRYRPA
FHKTILIVFVVVFLVLGYLGVQPPSPVGEKVSQLGTLLYFAFFLTMPLWSRAGEFKPVPERVTFHPH

Sequences:

>Translated_467_residues
MAAEKQVKTTGLLGWIDARFPATQLWEDHLSKYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNSAGIPV
AFASVEYIMREVPWGWLVRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMS
YWGAQVIVNLFSAIPVIGQDLSLFIRGDYVVSDATLNRFFSFHVIAVPLVLLALVVAHIIALHEVGSNNPDGVEIKAKKD
ENGIPLDGIPFHPYYSVHDTLGVAGFLVIFSAVIFFFPEVGGYFLEANNFFPADPLKTPPHIAPVWYFTPFYSMLRATTS
NFLPILWVFFALVLGMLFVRSKDARIKAASIAIAVILAVGFYFIDAKFWGVLVMGGSVVVLFFMPWLDCSPVKSIRYRPA
FHKTILIVFVVVFLVLGYLGVQPPSPVGEKVSQLGTLLYFAFFLTMPLWSRAGEFKPVPERVTFHPH
>Mature_466_residues
AAEKQVKTTGLLGWIDARFPATQLWEDHLSKYYAPKNFNFWYFFGSLALLVLVIQIVTGIFLVMNYKPDGTLNSAGIPVA
FASVEYIMREVPWGWLVRYMHSTGASAFFVVVYLHMFRGLLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSY
WGAQVIVNLFSAIPVIGQDLSLFIRGDYVVSDATLNRFFSFHVIAVPLVLLALVVAHIIALHEVGSNNPDGVEIKAKKDE
NGIPLDGIPFHPYYSVHDTLGVAGFLVIFSAVIFFFPEVGGYFLEANNFFPADPLKTPPHIAPVWYFTPFYSMLRATTSN
FLPILWVFFALVLGMLFVRSKDARIKAASIAIAVILAVGFYFIDAKFWGVLVMGGSVVVLFFMPWLDCSPVKSIRYRPAF
HKTILIVFVVVFLVLGYLGVQPPSPVGEKVSQLGTLLYFAFFLTMPLWSRAGEFKPVPERVTFHPH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=412, Percent_Identity=37.1359223300971, Blast_Score=240, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6226529, Length=318, Percent_Identity=40.8805031446541, Blast_Score=231, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6226532, Length=248, Percent_Identity=45.1612903225806, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=50.314465408805, Blast_Score=149, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6226530, Length=144, Percent_Identity=48.6111111111111, Blast_Score=126, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 52625; Mature: 52494

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAEKQVKTTGLLGWIDARFPATQLWEDHLSKYYAPKNFNFWYFFGSLALLVLVIQIVTG
CCCHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
IFLVMNYKPDGTLNSAGIPVAFASVEYIMREVPWGWLVRYMHSTGASAFFVVVYLHMFRG
HHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLYGSYRKPRELVWIFGCLIFLCLMAEAFMGYLLPWGQMSYWGAQVIVNLFSAIPVIGQD
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
LSLFIRGDYVVSDATLNRFFSFHVIAVPLVLLALVVAHIIALHEVGSNNPDGVEIKAKKD
CEEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
ENGIPLDGIPFHPYYSVHDTLGVAGFLVIFSAVIFFFPEVGGYFLEANNFFPADPLKTPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
HIAPVWYFTPFYSMLRATTSNFLPILWVFFALVLGMLFVRSKDARIKAASIAIAVILAVG
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FYFIDAKFWGVLVMGGSVVVLFFMPWLDCSPVKSIRYRPAFHKTILIVFVVVFLVLGYLG
HHHHHHHHHHHHEECCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
VQPPSPVGEKVSQLGTLLYFAFFLTMPLWSRAGEFKPVPERVTFHPH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA