| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is secA [H]
Identifier: 73542654
GI number: 73542654
Start: 3256071
End: 3258845
Strand: Reverse
Name: secA [H]
Synonym: Reut_A2970
Alternate gene names: 73542654
Gene position: 3258845-3256071 (Counterclockwise)
Preceding gene: 73542656
Following gene: 73542653
Centisome position: 85.61
GC content: 63.68
Gene sequence:
>2775_bases ATGATCACGGGCCTTCTCAAGAAAGTCTTCGGCAGCCGTAATGAACGGCTGATCAAACAATACCGCCGCACGGTGGAGCA GATCAACGCGCTGGAGCCCAAGTTCGAGCAGCTCTCGGACGACCAACTGCGCGGCATGACCGAGACCTTCCGGCAGCGCC ACGCTGGCGGCGAGTCGCTCGAGTCGCTGCTGCCCGAGGCGTTTGCCGTGTGCCGCGAGGCCAGCAAGCGCATCATGAAG ATGCGCCACTTCGACGTGCAGCTGATCGGCGGCATGGTGCTCAATGACAACAAGATCGCCGAAATGCGCACCGGCGAAGG CAAGACGCTGACCGCGACGCTGGCCGTGTACCTCAATGCCATCACCGGCAAGGGCGTGCACGTGGTGACCGTCAACGATT ACCTGGCCCAGCGCGATGCCGAGTGGATGGGGCGCCTGTACAACTACCTGGGCCTGTCGGTGGGCGTGAACCTGTCGCAG ATGGCGCATGACCAGAAGCAGGCCGCGTACAACGCCGACATCACCTACGGCACCAACAACGAGTTCGGCTTCGACTACCT GCGCGACAACATGGTCTATGACCCGTCGCAGCGCGTGCAGCGTCCGCTGAACTACGCGATCGTCGATGAAGTGGACTCGA TCCTGATCGACGAGGCGCGTACGCCGCTGATCATCTCGGGCCAGGCCGAGAACCACACCGACCTGTACCAGCGCATGAAC GGCATCCCGAGGCTGCTCGAGCGCCAGATCGGCGAGGAAAAGGCCGACGGCACGGGCGTCGAGAAGCCGGGCGACTACTA CGTGGATGAAAAGGGCCACCAGGTCTACCTGACCGAGGCTGGCCACGAAAAGGCGGAAGAGATCCTGGCGCAGCAAGGCC TGATCGGCGAGGGCGAATCGCTCTACGCACCGCAGAACATCACGCTGATGCACCACCTGTACGCGGCCCTGCGCGCGCAC AGCCTGTTCCATCGTGACCAGCACTACGTGGTGCAGAACGACGAAGTCGTGATCGTCGACGAATTCACGGGCCGCCTGAT GACGGGCCGCCGCTGGTCCGACGGTCTGCACCAGGCCGTGGAAGCCAAGGAAGGCGTGTCGATCCAGCAGGAAAACCAGA CGCTGGCGACCATCACCTTCCAGAACTACTTCCGCATGTACACCAAGCTGGCCGGCATGACCGGCACGGCTGACACGGAA GCCTACGAATTCCAGGAGATCTACGGCCTGGAAGTGGTCGTGATCCCGACCAACCGCGCGGCGCAGCGCAAGGACCTGCA GGACCAGATCTACAAGACGTCGAAGGAACGCTACGACGCCGTCGTGCGCGATATCCGCGACTGCTACGACCGTGGCCAGC CGGTGCTGGTCGGCACGACCTCGATCGAGACGTCCGAATACCTGTCGGACCTGCTCAACAAGGAAAAGCTGCCGCACCAG GTGCTCAACGCCAAGCAGCACGAGCGCGAAGCCGAGATCGTGGCCCAGGCCGGCCGGCCCAAGATGATCACCATCGCGAC CAACATGGCGGGCCGCGGTACCGACATCGTGCTCGGCGGCAACGTGGAGAAGCAGGCAGGCTTTGTCGAGATTGACCCGA ACCTGTCGGACGCCGACAAGGCCGCGCGTATCCAGCAACTCAAGGATGAATGGCAGTCGCTGCACGAGCAGGTCAAGTCG TTCGGCGGTCTGCATATCGTGGGCACCGAGCGCCATGAATCGCGCCGTATCGACAACCAGCTGCGTGGCCGTGCCGGCCG CCAGGGCGACCCGGGTTCGTCGCGTTTCTACCTGTCGCTGGACGACCAACTGCTGCGCATTTTCGCAGGCGACCGCGTGC GCGCGATCATGGAACGCCTGAAGATGCCCGAGGGTGAGCCGATCGAGGCCGGCATCGTCACGCGTTCGATCGAATCGGCG CAGCGCAAGGTGGAAGGCCGCAACTTCGACATCCGCAAGCAGCTGCTGCAGTACGACGACGTTGCCAACGACCAGCGCAA GGAAATCTACAAGCTGCGCAACGACGTGCTCGAAGCCAATGACGTCGGCGAAATGGTCAAGAACCTGCGCGAAAGCGTGC TGATCGAGCTGTTCCGCGAGCACGTGGCGGCCGACACCATGGAAGAGCAGTGGGACATCGCCGGCCTCGAAACGCGCCTG CGCGAGGACTGGGGCCTGGAGCTGCCGCTGGCCAAGACCATCGAAGGCGCTCAGAGCATCGAGGACGAGGCGCTGCTCGA CATGATCCTCAAGGCGGCCGAAGAACGTTACGAAGGCAAGGTTGCGATGGTGGGCCGCGAATCGTTCGCGGGCTTCGAGC GCTCGGTCATGCTGCAAAGCATCGACTCGCACTGGCGCGAGCACCTGGCCGCGCTGGACCACCTGCGCCAGGGCATCCAT CTGCGGGGCTATGCGCAGAAGGATCCGAAGCAGGAATACAAGCGCGAGTCGTTCGAACTGTTCGCGCGCCTGCTGGACGT GATCAAGAACGAAGTCACGCGCGTGACGTTCAACGTGCAGATCCAGTCGCCGGAAGAGCTGGAGCAGGCTTCGGAGCAGA TCGAGGAAGGCCTGTCGCACCTGGAGAACGTCCAGTACAAGCACGACGAGTTTGCCGAGGGCCGCGAGCCCGTGGAGGAC GCGCCGTCGCTGCGCACGGGCGCTGCGGTGGCCGCCGAGATGGCGGTGGCCGGCATGCCGAAGGTCGGCCGCAACGATCC TTGCCCGTGCGGTTCGGGCAAGAAGTTCAAGCAGTGCCACGGCAAGCTGAGCTGA
Upstream 100 bases:
>100_bases TGATAAACTCGGCGTTTTGCGCCAATCTATCCATGCCTGGCACGGCTGGGGCTGCCTATCCATGGGTCGCCGGTCCGGAC CGCGCAGGTGAAAGCACTCG
Downstream 100 bases:
>100_bases GCCCCGCGCCAGCCGCGCCGTGCAGGATTGCCCTGGCCGCCGTAGCGGAAGGGGCGAAGAGATAACGACATGCCCGCGCT ACGCGGGCATGTTCGTCTGA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 924; Mature: 924
Protein sequence:
>924_residues MITGLLKKVFGSRNERLIKQYRRTVEQINALEPKFEQLSDDQLRGMTETFRQRHAGGESLESLLPEAFAVCREASKRIMK MRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNAITGKGVHVVTVNDYLAQRDAEWMGRLYNYLGLSVGVNLSQ MAHDQKQAAYNADITYGTNNEFGFDYLRDNMVYDPSQRVQRPLNYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMN GIPRLLERQIGEEKADGTGVEKPGDYYVDEKGHQVYLTEAGHEKAEEILAQQGLIGEGESLYAPQNITLMHHLYAALRAH SLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAVEAKEGVSIQQENQTLATITFQNYFRMYTKLAGMTGTADTE AYEFQEIYGLEVVVIPTNRAAQRKDLQDQIYKTSKERYDAVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQ VLNAKQHEREAEIVAQAGRPKMITIATNMAGRGTDIVLGGNVEKQAGFVEIDPNLSDADKAARIQQLKDEWQSLHEQVKS FGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDQLLRIFAGDRVRAIMERLKMPEGEPIEAGIVTRSIESA QRKVEGRNFDIRKQLLQYDDVANDQRKEIYKLRNDVLEANDVGEMVKNLRESVLIELFREHVAADTMEEQWDIAGLETRL REDWGLELPLAKTIEGAQSIEDEALLDMILKAAEERYEGKVAMVGRESFAGFERSVMLQSIDSHWREHLAALDHLRQGIH LRGYAQKDPKQEYKRESFELFARLLDVIKNEVTRVTFNVQIQSPEELEQASEQIEEGLSHLENVQYKHDEFAEGREPVED APSLRTGAAVAAEMAVAGMPKVGRNDPCPCGSGKKFKQCHGKLS
Sequences:
>Translated_924_residues MITGLLKKVFGSRNERLIKQYRRTVEQINALEPKFEQLSDDQLRGMTETFRQRHAGGESLESLLPEAFAVCREASKRIMK MRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNAITGKGVHVVTVNDYLAQRDAEWMGRLYNYLGLSVGVNLSQ MAHDQKQAAYNADITYGTNNEFGFDYLRDNMVYDPSQRVQRPLNYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMN GIPRLLERQIGEEKADGTGVEKPGDYYVDEKGHQVYLTEAGHEKAEEILAQQGLIGEGESLYAPQNITLMHHLYAALRAH SLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAVEAKEGVSIQQENQTLATITFQNYFRMYTKLAGMTGTADTE AYEFQEIYGLEVVVIPTNRAAQRKDLQDQIYKTSKERYDAVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQ VLNAKQHEREAEIVAQAGRPKMITIATNMAGRGTDIVLGGNVEKQAGFVEIDPNLSDADKAARIQQLKDEWQSLHEQVKS FGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDQLLRIFAGDRVRAIMERLKMPEGEPIEAGIVTRSIESA QRKVEGRNFDIRKQLLQYDDVANDQRKEIYKLRNDVLEANDVGEMVKNLRESVLIELFREHVAADTMEEQWDIAGLETRL REDWGLELPLAKTIEGAQSIEDEALLDMILKAAEERYEGKVAMVGRESFAGFERSVMLQSIDSHWREHLAALDHLRQGIH LRGYAQKDPKQEYKRESFELFARLLDVIKNEVTRVTFNVQIQSPEELEQASEQIEEGLSHLENVQYKHDEFAEGREPVED APSLRTGAAVAAEMAVAGMPKVGRNDPCPCGSGKKFKQCHGKLS >Mature_924_residues MITGLLKKVFGSRNERLIKQYRRTVEQINALEPKFEQLSDDQLRGMTETFRQRHAGGESLESLLPEAFAVCREASKRIMK MRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNAITGKGVHVVTVNDYLAQRDAEWMGRLYNYLGLSVGVNLSQ MAHDQKQAAYNADITYGTNNEFGFDYLRDNMVYDPSQRVQRPLNYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMN GIPRLLERQIGEEKADGTGVEKPGDYYVDEKGHQVYLTEAGHEKAEEILAQQGLIGEGESLYAPQNITLMHHLYAALRAH SLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAVEAKEGVSIQQENQTLATITFQNYFRMYTKLAGMTGTADTE AYEFQEIYGLEVVVIPTNRAAQRKDLQDQIYKTSKERYDAVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQ VLNAKQHEREAEIVAQAGRPKMITIATNMAGRGTDIVLGGNVEKQAGFVEIDPNLSDADKAARIQQLKDEWQSLHEQVKS FGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLDDQLLRIFAGDRVRAIMERLKMPEGEPIEAGIVTRSIESA QRKVEGRNFDIRKQLLQYDDVANDQRKEIYKLRNDVLEANDVGEMVKNLRESVLIELFREHVAADTMEEQWDIAGLETRL REDWGLELPLAKTIEGAQSIEDEALLDMILKAAEERYEGKVAMVGRESFAGFERSVMLQSIDSHWREHLAALDHLRQGIH LRGYAQKDPKQEYKRESFELFARLLDVIKNEVTRVTFNVQIQSPEELEQASEQIEEGLSHLENVQYKHDEFAEGREPVED APSLRTGAAVAAEMAVAGMPKVGRNDPCPCGSGKKFKQCHGKLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=926, Percent_Identity=58.7473002159827, Blast_Score=1072, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104744; Mature: 104744
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITGLLKKVFGSRNERLIKQYRRTVEQINALEPKFEQLSDDQLRGMTETFRQRHAGGESL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCHHHH ESLLPEAFAVCREASKRIMKMRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNA HHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEECCCCEEHEECCCCCCHHHHHHHHHHH ITGKGVHVVTVNDYLAQRDAEWMGRLYNYLGLSVGVNLSQMAHDQKQAAYNADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCC EFGFDYLRDNMVYDPSQRVQRPLNYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMN CCCHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHC GIPRLLERQIGEEKADGTGVEKPGDYYVDEKGHQVYLTEAGHEKAEEILAQQGLIGEGES CHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCC LYAPQNITLMHHLYAALRAHSLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAV EECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHCCCCHHHHHHHHH EAKEGVSIQQENQTLATITFQNYFRMYTKLAGMTGTADTEAYEFQEIYGLEVVVIPTNRA HHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCC AQRKDLQDQIYKTSKERYDAVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH VLNAKQHEREAEIVAQAGRPKMITIATNMAGRGTDIVLGGNVEKQAGFVEIDPNLSDADK HHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCHHHCCEEEECCCCCCHHH AARIQQLKDEWQSLHEQVKSFGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEH DDQLLRIFAGDRVRAIMERLKMPEGEPIEAGIVTRSIESAQRKVEGRNFDIRKQLLQYDD HHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC VANDQRKEIYKLRNDVLEANDVGEMVKNLRESVLIELFREHVAADTMEEQWDIAGLETRL CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH REDWGLELPLAKTIEGAQSIEDEALLDMILKAAEERYEGKVAMVGRESFAGFERSVMLQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHH IDSHWREHLAALDHLRQGIHLRGYAQKDPKQEYKRESFELFARLLDVIKNEVTRVTFNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE IQSPEELEQASEQIEEGLSHLENVQYKHDEFAEGREPVEDAPSLRTGAAVAAEMAVAGMP ECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC KVGRNDPCPCGSGKKFKQCHGKLS CCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MITGLLKKVFGSRNERLIKQYRRTVEQINALEPKFEQLSDDQLRGMTETFRQRHAGGESL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCCHHHH ESLLPEAFAVCREASKRIMKMRHFDVQLIGGMVLNDNKIAEMRTGEGKTLTATLAVYLNA HHHHHHHHHHHHHHHHHHHHHHHCCHHEECCEEECCCCEEHEECCCCCCHHHHHHHHHHH ITGKGVHVVTVNDYLAQRDAEWMGRLYNYLGLSVGVNLSQMAHDQKQAAYNADITYGTNN HCCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCC EFGFDYLRDNMVYDPSQRVQRPLNYAIVDEVDSILIDEARTPLIISGQAENHTDLYQRMN CCCHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHC GIPRLLERQIGEEKADGTGVEKPGDYYVDEKGHQVYLTEAGHEKAEEILAQQGLIGEGES CHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCC LYAPQNITLMHHLYAALRAHSLFHRDQHYVVQNDEVVIVDEFTGRLMTGRRWSDGLHQAV EECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHCCCCHHHHHHHHH EAKEGVSIQQENQTLATITFQNYFRMYTKLAGMTGTADTEAYEFQEIYGLEVVVIPTNRA HHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEECCCCC AQRKDLQDQIYKTSKERYDAVVRDIRDCYDRGQPVLVGTTSIETSEYLSDLLNKEKLPHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCHH VLNAKQHEREAEIVAQAGRPKMITIATNMAGRGTDIVLGGNVEKQAGFVEIDPNLSDADK HHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCHHHCCEEEECCCCCCHHH AARIQQLKDEWQSLHEQVKSFGGLHIVGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEH DDQLLRIFAGDRVRAIMERLKMPEGEPIEAGIVTRSIESAQRKVEGRNFDIRKQLLQYDD HHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC VANDQRKEIYKLRNDVLEANDVGEMVKNLRESVLIELFREHVAADTMEEQWDIAGLETRL CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH REDWGLELPLAKTIEGAQSIEDEALLDMILKAAEERYEGKVAMVGRESFAGFERSVMLQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHH IDSHWREHLAALDHLRQGIHLRGYAQKDPKQEYKRESFELFARLLDVIKNEVTRVTFNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE IQSPEELEQASEQIEEGLSHLENVQYKHDEFAEGREPVEDAPSLRTGAAVAAEMAVAGMP ECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC KVGRNDPCPCGSGKKFKQCHGKLS CCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA