Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
---|---|
Accession | NC_007347 |
Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is fur [H]
Identifier: 73542522
GI number: 73542522
Start: 3110053
End: 3110484
Strand: Direct
Name: fur [H]
Synonym: Reut_A2837
Alternate gene names: 73542522
Gene position: 3110053-3110484 (Clockwise)
Preceding gene: 73542512
Following gene: 73542524
Centisome position: 81.7
GC content: 56.94
Gene sequence:
>432_bases ATGCCGAGTCCGGCGGAGCTCAAGAATATCGGCCTAAAGGCGACCGTGCCGCGGCTGAAAATTCTTGAGATTTTTCAGAC CAGTGAACAGCGCCACCTGAGCGCTGAAGACGTCTACCGAATCCTGCTCAACGAGCATATGGATATCGGCCTGGCGACCG TTTACCGTGTGCTCACCCAGTTCGAGCAGGCGGGCCTTCTGTCGCGCAACAATTTCGAATCCGGCAAGGCCATTTTCGAG CTCAACGAAGGCAAGCACCACGACCACTTGGTATGCCTCGATTGCGGCCGCGTGGAGGAGTTCTTCGACGGCGAGATCGA GCAACGCCAGCAAAGCATCGCGCGCGAACGCGGCTTTGCGCTGCAGGAACATGCGTTGTCGCTGTACGGCAACTGCACCA AAACTGATTGTCCCCACAGACCAAAACGATAA
Upstream 100 bases:
>100_bases GGCGGAAGCCGCCTTTGCTGGCCCTGGCACCGGGCGACTTTTGTCGCCAAAACCCTTATGATTCAACTATCCAGACATTG TACTCTAGGGAGTCACGCCC
Downstream 100 bases:
>100_bases GCCGGCCACCGCTCGTGCGCGGCGGGATGGCAGCAAGAAAAAACCGGCGCCTGTGCGCCGGTTTTTTCTTGGGTCCGAAT GAGCCTGAGGCTGCGATCAG
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPSPAELKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFE LNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARERGFALQEHALSLYGNCTKTDCPHRPKR
Sequences:
>Translated_143_residues MPSPAELKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFE LNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARERGFALQEHALSLYGNCTKTDCPHRPKR >Mature_142_residues PSPAELKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFEL NEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARERGFALQEHALSLYGNCTKTDCPHRPKR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=56.4885496183206, Blast_Score=161, Evalue=2e-41,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16404; Mature: 16273
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPAELKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQ CCCCHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIFELNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARERGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCH LQEHALSLYGNCTKTDCPHRPKR HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PSPAELKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQ CCCHHHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIFELNEGKHHDHLVCLDCGRVEEFFDGEIEQRQQSIARERGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHCCH LQEHALSLYGNCTKTDCPHRPKR HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA