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The map label for this gene is yohK [H]

Identifier: 73542480

GI number: 73542480

Start: 3065619

End: 3066344

Strand: Direct

Name: yohK [H]

Synonym: Reut_A2795

Alternate gene names: 73542480

Gene position: 3065619-3066344 (Clockwise)

Preceding gene: 73542479

Following gene: 73542481

Centisome position: 80.54

GC content: 67.36

Gene sequence:

>726_bases
ATGATGACGCCCCGCCTCAACGAGATCTGGGTCTACCTTGCCGCGAGCCCGCTGGTCGGGCTGACCGCAACGCTGCTGGC
CTATGTGTTCGCGTTCCGCATCTACGAGCGCTCGCGTTTCTCGCCGCTGGCCAACCCGGTGATGATCGCCGTGGCGCTGC
TGGTCACGGTGCTGACAGTCACGGGCACGCCGTACAAGACCTACTTCGATGGTGCGCAGTTCGTGCACTTCCTGCTCGGC
CCCGCCACCGTGGCGCTGGCCGTGCCGCTCTACCTGCAACTGCCCAAGCTGCGCACGCATGTGTTCCCGCTGCTGGTAGG
CCTCGTCGCCGGATCGCTGGTCGCGGTGGTATCGGCGGTCGGCATTGCATGGCTGCTCGGCGCATCGCGCGAGACGGTGC
TGTCGCTCGCACCGAAGTCGGTGACGATCCCGATCGCCATGGGCGTAGCCGAGAAGATCGGCGGGCTGCCTTCGCTGACC
GCAGTGCTGGTGATGGCCACCGGCATCATCGGCGCAGTCAGCGCAACCAGCCTGCTGAACCTGCTGCGCGTCCGCGACTA
CACGGTGCGTGGTTTCGCCACTGGCGTGGCGGCGCACGGCATCGGCACCGCGCGCGCATTCCAGGTGAACCAGGAAGCCG
GTGCATTCGCCGCGCTCGGCATGGGACTCAACGGCGTGCTGACAGCCATCATGGTGCCGGTGCTGGCGGCCTGGATGCCC
CACTGA

Upstream 100 bases:

>100_bases
CCATCGCGACCACCGCCGTGGTCACGCGCATGCTGATGCGCAAGCCCAAGGCGCCCGCCGCGCAGGCTGCCAATGCTGCC
GACCACAGCGGAGAACAAGC

Downstream 100 bases:

>100_bases
ACGTGCTGACACGCTCCTGACAGGACGCTGTCAGCAGGCCCCGCGCAAGATGCGGACTCCTTTTCCCCGTGACCAAGGAG
TCCATCATGAGCAACGGTCT

Product: LrgB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MMTPRLNEIWVYLAASPLVGLTATLLAYVFAFRIYERSRFSPLANPVMIAVALLVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYLQLPKLRTHVFPLLVGLVAGSLVAVVSAVGIAWLLGASRETVLSLAPKSVTIPIAMGVAEKIGGLPSLT
AVLVMATGIIGAVSATSLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVNQEAGAFAALGMGLNGVLTAIMVPVLAAWMP
H

Sequences:

>Translated_241_residues
MMTPRLNEIWVYLAASPLVGLTATLLAYVFAFRIYERSRFSPLANPVMIAVALLVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYLQLPKLRTHVFPLLVGLVAGSLVAVVSAVGIAWLLGASRETVLSLAPKSVTIPIAMGVAEKIGGLPSLT
AVLVMATGIIGAVSATSLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVNQEAGAFAALGMGLNGVLTAIMVPVLAAWMP
H
>Mature_241_residues
MMTPRLNEIWVYLAASPLVGLTATLLAYVFAFRIYERSRFSPLANPVMIAVALLVTVLTVTGTPYKTYFDGAQFVHFLLG
PATVALAVPLYLQLPKLRTHVFPLLVGLVAGSLVAVVSAVGIAWLLGASRETVLSLAPKSVTIPIAMGVAEKIGGLPSLT
AVLVMATGIIGAVSATSLLNLLRVRDYTVRGFATGVAAHGIGTARAFQVNQEAGAFAALGMGLNGVLTAIMVPVLAAWMP
H

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=212, Percent_Identity=41.9811320754717, Blast_Score=167, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTPRLNEIWVYLAASPLVGLTATLLAYVFAFRIYERSRFSPLANPVMIAVALLVTVLTV
CCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TGTPYKTYFDGAQFVHFLLGPATVALAVPLYLQLPKLRTHVFPLLVGLVAGSLVAVVSAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAWLLGASRETVLSLAPKSVTIPIAMGVAEKIGGLPSLTAVLVMATGIIGAVSATSLLN
HHHHHHCCCHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLRVRDYTVRGFATGVAAHGIGTARAFQVNQEAGAFAALGMGLNGVLTAIMVPVLAAWMP
HHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC
H
C
>Mature Secondary Structure
MMTPRLNEIWVYLAASPLVGLTATLLAYVFAFRIYERSRFSPLANPVMIAVALLVTVLTV
CCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
TGTPYKTYFDGAQFVHFLLGPATVALAVPLYLQLPKLRTHVFPLLVGLVAGSLVAVVSAV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAWLLGASRETVLSLAPKSVTIPIAMGVAEKIGGLPSLTAVLVMATGIIGAVSATSLLN
HHHHHHCCCHHHHHHCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLRVRDYTVRGFATGVAAHGIGTARAFQVNQEAGAFAALGMGLNGVLTAIMVPVLAAWMP
HHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]