Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is coaBC [H]
Identifier: 73542432
GI number: 73542432
Start: 3017085
End: 3018287
Strand: Direct
Name: coaBC [H]
Synonym: Reut_A2747
Alternate gene names: 73542432
Gene position: 3017085-3018287 (Clockwise)
Preceding gene: 73542431
Following gene: 73542433
Centisome position: 79.26
GC content: 68.0
Gene sequence:
>1203_bases ATGGATTTGCGCGGCAAGCACATCGTTCTCGGCCTGACCGGCGGCATCGCCTGCTACAAGTCGGCCGAACTGGTCCGCCT GCTGACCAAGGCCGGCGCCACGGTTCAAGTGGCGATGACCGAGGCGGCGACCCATTTCATCACCCCGGTCACGATGCAGG CCCTGTCGGGCCGCCCGGTGTTCCTGTCGCAGTGGGATGCGCGCGTCGACAACAACATGGCGCACATCGATCTCTCGCGC GAGGCCGATGTCATCGTGATCGCGCCAGCATCGACGGACTTCCTCGCCAAGCTGGCCAACGGGCTCTGCGACGATTTGCT GACCACGCTGTGCATTGCGCGCGACTGTCCGCTTCTCGTGGCACCGGCCATGAACCGCCAGATGTGGGCCGCTGCGCCGA CGCAACGCAATGCGGCGCAACTCCGTGCCGATGGCGTCGTCATCCTCGGCCCCGGCAGCGGCGATCAGGCCTGCGGCGAA GTCGGCGACGGCCGCATGCTGGAGCCCGAAGAGCTGGTCGACGACATCATCGCGTTCTTCCAGCCCAAGCCGCTGGCAGG CAAGCGCGTTCTGATCACCGCGGGCCCGACGTTCGAAGCGATCGACCCGGTACGCGGCATCACCAACCTGTCGTCGGGCA AGATGGGCTTTTCGATCGCGCGCGCCGCGCGCGAAGCCGGTGCCGACGTGCGGCTGGTCTCCGGCCCGACTGGCCTGCCC ACGCCGCGCGGCGTAGTGCGCAGCGATGTGCGCAGCGCCCAGCAGATGCATGACTCGGTGCTGGCCCAGTTGCACGACGT CGACGTGTTCATCGCGGTCGCCGCCGTGGCCGACTGGCGCCCCGCCGAGGTCGCCCAGCAGAAGCTCAAGAAGGTCAACG ATACCGACACCCCGACGCTGCAGTTCGTGCAGAACCCGGATATCCTCGCCACCGTGGCGGCGCGCGCCGATGCGCCCTAC TGCGTCGGCTTTGCCGCCGAGAGCGAGAACCTTGAGCAATACGGCGAGCAGAAGCGCCAGCGCAAGGGCGTGCCGCTGCT GGTTGGCAATATCGGCCACCATACCTTCGGGCTCGACGACAACGAGATCGTGCTGTTCGATGCCGCGGGCATGACGCGAC TGCCGCGCGCCGACAAGCTGACGCTGGCGCGGCAGCTTGTGGCCGCCATCGGTCAGCGCCTGCCGGGCCGTGCCCACCCC TGA
Upstream 100 bases:
>100_bases CGTCGACGAGCTGCGGCGCGTGCGCAAGCACTAAGCCGCCGCCGGCAGCCTGCGCAGGCTGCCGGTATCATGCCGAAACC CAATCTCTGACGAGCCTTCC
Downstream 100 bases:
>100_bases CGCGCATGACTGCGAACCGACCCCGGCTGCGCCTGTCCGTGCTCGACCAGAGCCCGGTGATCGCCGGCCATACCGCGCGT GACGCGCTTGCTGCCACCAT
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MDLRGKHIVLGLTGGIACYKSAELVRLLTKAGATVQVAMTEAATHFITPVTMQALSGRPVFLSQWDARVDNNMAHIDLSR EADVIVIAPASTDFLAKLANGLCDDLLTTLCIARDCPLLVAPAMNRQMWAAAPTQRNAAQLRADGVVILGPGSGDQACGE VGDGRMLEPEELVDDIIAFFQPKPLAGKRVLITAGPTFEAIDPVRGITNLSSGKMGFSIARAAREAGADVRLVSGPTGLP TPRGVVRSDVRSAQQMHDSVLAQLHDVDVFIAVAAVADWRPAEVAQQKLKKVNDTDTPTLQFVQNPDILATVAARADAPY CVGFAAESENLEQYGEQKRQRKGVPLLVGNIGHHTFGLDDNEIVLFDAAGMTRLPRADKLTLARQLVAAIGQRLPGRAHP
Sequences:
>Translated_400_residues MDLRGKHIVLGLTGGIACYKSAELVRLLTKAGATVQVAMTEAATHFITPVTMQALSGRPVFLSQWDARVDNNMAHIDLSR EADVIVIAPASTDFLAKLANGLCDDLLTTLCIARDCPLLVAPAMNRQMWAAAPTQRNAAQLRADGVVILGPGSGDQACGE VGDGRMLEPEELVDDIIAFFQPKPLAGKRVLITAGPTFEAIDPVRGITNLSSGKMGFSIARAAREAGADVRLVSGPTGLP TPRGVVRSDVRSAQQMHDSVLAQLHDVDVFIAVAAVADWRPAEVAQQKLKKVNDTDTPTLQFVQNPDILATVAARADAPY CVGFAAESENLEQYGEQKRQRKGVPLLVGNIGHHTFGLDDNEIVLFDAAGMTRLPRADKLTLARQLVAAIGQRLPGRAHP >Mature_400_residues MDLRGKHIVLGLTGGIACYKSAELVRLLTKAGATVQVAMTEAATHFITPVTMQALSGRPVFLSQWDARVDNNMAHIDLSR EADVIVIAPASTDFLAKLANGLCDDLLTTLCIARDCPLLVAPAMNRQMWAAAPTQRNAAQLRADGVVILGPGSGDQACGE VGDGRMLEPEELVDDIIAFFQPKPLAGKRVLITAGPTFEAIDPVRGITNLSSGKMGFSIARAAREAGADVRLVSGPTGLP TPRGVVRSDVRSAQQMHDSVLAQLHDVDVFIAVAAVADWRPAEVAQQKLKKVNDTDTPTLQFVQNPDILATVAARADAPY CVGFAAESENLEQYGEQKRQRKGVPLLVGNIGHHTFGLDDNEIVLFDAAGMTRLPRADKLTLARQLVAAIGQRLPGRAHP
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=180, Percent_Identity=37.7777777777778, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI87082301, Length=399, Percent_Identity=49.3734335839599, Blast_Score=335, Evalue=4e-93, Organism=Caenorhabditis elegans, GI17560194, Length=179, Percent_Identity=35.195530726257, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322762, Length=192, Percent_Identity=31.7708333333333, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI24657262, Length=189, Percent_Identity=32.8042328042328, Blast_Score=96, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 42680; Mature: 42680
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRGKHIVLGLTGGIACYKSAELVRLLTKAGATVQVAMTEAATHFITPVTMQALSGRPV CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCHHHHHHHCCCCE FLSQWDARVDNNMAHIDLSREADVIVIAPASTDFLAKLANGLCDDLLTTLCIARDCPLLV EEECCCHHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE APAMNRQMWAAAPTQRNAAQLRADGVVILGPGSGDQACGEVGDGRMLEPEELVDDIIAFF ECCCCCCEEECCCCCCCHHHHHHCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHH QPKPLAGKRVLITAGPTFEAIDPVRGITNLSSGKMGFSIARAAREAGADVRLVSGPTGLP CCCCCCCCEEEEEECCCCHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC TPRGVVRSDVRSAQQMHDSVLAQLHDVDVFIAVAAVADWRPAEVAQQKLKKVNDTDTPTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEE QFVQNPDILATVAARADAPYCVGFAAESENLEQYGEQKRQRKGVPLLVGNIGHHTFGLDD EEECCCCCEEEEHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCC NEIVLFDAAGMTRLPRADKLTLARQLVAAIGQRLPGRAHP CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDLRGKHIVLGLTGGIACYKSAELVRLLTKAGATVQVAMTEAATHFITPVTMQALSGRPV CCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCHHHHHHHCCCCE FLSQWDARVDNNMAHIDLSREADVIVIAPASTDFLAKLANGLCDDLLTTLCIARDCPLLV EEECCCHHHCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE APAMNRQMWAAAPTQRNAAQLRADGVVILGPGSGDQACGEVGDGRMLEPEELVDDIIAFF ECCCCCCEEECCCCCCCHHHHHHCCEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHH QPKPLAGKRVLITAGPTFEAIDPVRGITNLSSGKMGFSIARAAREAGADVRLVSGPTGLP CCCCCCCCEEEEEECCCCHHCCHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC TPRGVVRSDVRSAQQMHDSVLAQLHDVDVFIAVAAVADWRPAEVAQQKLKKVNDTDTPTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEE QFVQNPDILATVAARADAPYCVGFAAESENLEQYGEQKRQRKGVPLLVGNIGHHTFGLDD EEECCCCCEEEEHHCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCC NEIVLFDAAGMTRLPRADKLTLARQLVAAIGQRLPGRAHP CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]