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The map label for this gene is radC [C]

Identifier: 73542417

GI number: 73542417

Start: 2999137

End: 2999823

Strand: Direct

Name: radC [C]

Synonym: Reut_A2732

Alternate gene names: 73542417

Gene position: 2999137-2999823 (Clockwise)

Preceding gene: 73542408

Following gene: 73542418

Centisome position: 78.79

GC content: 67.1

Gene sequence:

>687_bases
ATGAGCATCACAAACTGGCCCGCCTGCGAGCGGCCACGAGAAAAACTGCAGGAATGCGGCGCCGCCGCGTTGTCTGACGC
CGAACTGCTGGCTGTGTTCCTGCGCGTTGGCGCAACCGGCAAGAGCGCGGTGGAGCTTGCGCGCGACCTGATGGTCCGCT
TCGGCTCGCTGACGCGCCTGTTCACGGCCGACGCGCGCGCCGTGCTCGGCATCCGGGGCATGGGCGAAGCCAAGTACACC
CAGCTGCAGGCCGTGCCCGAACTGGCGCGCCGCATGCTCGCCGAGTCACTGGAACTGCCGAGCGGGCTGGATTCCCCCGC
GGCAGTACGCAGCTATCTGCGCCTGACACTGGCGCCGCTCGCCCAGGAGGTCTTCGTCTGCCTGTTTTTGGACACACGCA
ACCGCATGATCGCCAGCGAGGAGCTGTTCCGCGGCACGCTGAACCAGACCGCCGTCTACCCCCGCGAAGTGGCGCGCCGG
GCGCTGGCGCATAATGCGGCCAGCGTCATCGTTGCGCATAATCATCCCTCCGGCTGTTGCACGCCGAGCCAGAGCGACCT
GCAGATGACGCGCATGCTGGCGCGCGCGCTCGACCTGATCGATGTGCGGCTGCTCGACCATTTCGTCGTGGCCGGCACCC
ATGTGCACTCGTTTGCCGAACACGGCGAGCTTAAGACCGCCACGTGA

Upstream 100 bases:

>100_bases
CAACCTGTCGACAACCCGTATTGTATTCGACTGGGCCACCGGACGCCCTGCCGATCCACCCTCGCCCGGCCCGACGCACC
CGTCCCGAGACTCCCGCGAC

Downstream 100 bases:

>100_bases
CGCCTGCGGCACGGTGCAGAGGTATACGGCCGGTATACAACGCCAGAGTGGCGAAGGCATTGATTAGCCGATGCTTTCCG
GTCTATAATGCCCGTTTTGC

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFTADARAVLGIRGMGEAKYT
QLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARR
ALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGELKTAT

Sequences:

>Translated_228_residues
MSITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFTADARAVLGIRGMGEAKYT
QLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARR
ALAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGELKTAT
>Mature_227_residues
SITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRLFTADARAVLGIRGMGEAKYTQ
LQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPLAQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRA
LAHNAASVIVAHNHPSGCCTPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGELKTAT

Specific function: Involved In DNA Repair. [C]

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family

Homologues:

Organism=Escherichia coli, GI87082300, Length=211, Percent_Identity=42.654028436019, Blast_Score=186, Evalue=9e-49,
Organism=Escherichia coli, GI2367100, Length=137, Percent_Identity=51.8248175182482, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1788997, Length=120, Percent_Identity=51.6666666666667, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1788312, Length=120, Percent_Identity=53.3333333333333, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2732_CUPPJ (Q46XP0)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_296937.1
- ProteinModelPortal:   Q46XP0
- SMR:   Q46XP0
- GeneID:   3610184
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A2732
- NMPDR:   fig|264198.3.peg.2165
- HOGENOM:   HBG751042
- OMA:   HAAMAHE
- ProtClustDB:   PRK00024
- BioCyc:   REUT264198:REUT_A2732-MONOMER
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891
- TIGRFAMs:   TIGR00608

Pfam domain/function: PF04002 DUF2466; SSF47781 RuvA_2_like

EC number: NA

Molecular weight: Translated: 24909; Mature: 24778

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS01302 UPF0758

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRL
CCCCCCCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FTADARAVLGIRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCC
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEECCCCCCC
TPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGELKTAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SITNWPACERPREKLQECGAAALSDAELLAVFLRVGATGKSAVELARDLMVRFGSLTRL
CCCCCCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
FTADARAVLGIRGMGEAKYTQLQAVPELARRMLAESLELPSGLDSPAAVRSYLRLTLAPL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AQEVFVCLFLDTRNRMIASEELFRGTLNQTAVYPREVARRALAHNAASVIVAHNHPSGCC
HHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEECCCCCCC
TPSQSDLQMTRMLARALDLIDVRLLDHFVVAGTHVHSFAEHGELKTAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA