Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yggG [H]
Identifier: 73542391
GI number: 73542391
Start: 2968609
End: 2969361
Strand: Direct
Name: yggG [H]
Synonym: Reut_A2706
Alternate gene names: 73542391
Gene position: 2968609-2969361 (Clockwise)
Preceding gene: 73542390
Following gene: 73542392
Centisome position: 77.99
GC content: 62.82
Gene sequence:
>753_bases ATGACGCGATATGCACGATATGCCGTCCCTGCCCTTGCCTGCATTGCCCTGCAGGCCGGTTGCGCCAACATGAACATGGA CAGCATGACGCAGGCGGGCGGCAGCCTGTTTTCTGCCGCCTCGCTGTCCGATGCCAACGTCAAGACCTTGTCCGACCAGT CATGCGCGGAGATGGACAAGAAGAACACCATCGCCGCAGCCGACAGCACCTACACGAAACGGCTCGCCAACGTCATGAGC GGCCTGGGCAATACCGGCCTGCCGCTTGATGCAAAGGTCTACATGACCAAGGACGTCAATGCCTGGGCCATGGCCAACGG CTGCGTGCGTGTCTACAGCGGCCTCATGGACCTGATGACCGACGATGAAGTCCGCGGCGTGGTCGGGCACGAAATCGGCC ACGTCGCGCTGGGGCATACCAAGGCCGCCATGCAGGTTGCCTACGGCACGTCGGCTGCGCGCGGCGCGCTGGGCGCGCTG GGGAACCCGACGCTTACCGCGCTGACGTCATCGCAGATCGCGGACCTTGGTGAGCAGTTCATCAACGCGCAGTTTTCCCA ACGGCAGGAAAGTGCCGCCGATGACTATTCTTTCGATTTGCTGACGAAGAACGGTGCAAACCGCCAAGCGCTTGCCTCCG CGTTCCGCAAGCTGGCCTCGCTCGATGGCGGGCAGTCAAGCATGCTGAGTTCCCACCCGGGCTCGCTTGAGCGCGCCAAG CATATCGACGCGCGCCTTGCCGGAGGCAAATAA
Upstream 100 bases:
>100_bases ACCCACTCGCCGCCCTGCGTGTCGGACGGAATCCACTGGCGCATCCGCCCACGGTTTTCCTATGCTATGCATTGGTCAAT CCCGCCACGGAGCCCCAGCC
Downstream 100 bases:
>100_bases GCGCGACACCGTGACAGCCGTGCGACACCCGATTGGGTGAAGCACGGCACAAGCATCTCCAGCCCACACTGCACCGCACC GCGATGCAGTGCAGCAGCCA
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDKKNTIAAADSTYTKRLANVMS GLGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMTDDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGAL GNPTLTALTSSQIADLGEQFINAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAK HIDARLAGGK
Sequences:
>Translated_250_residues MTRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDKKNTIAAADSTYTKRLANVMS GLGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMTDDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGAL GNPTLTALTSSQIADLGEQFINAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAK HIDARLAGGK >Mature_249_residues TRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDKKNTIAAADSTYTKRLANVMSG LGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMTDDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGALG NPTLTALTSSQIADLGEQFINAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAKH IDARLAGGK
Specific function: Seems to regulate the expression of speB [H]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI87082185, Length=245, Percent_Identity=54.6938775510204, Blast_Score=267, Evalue=4e-73, Organism=Escherichia coli, GI87081800, Length=241, Percent_Identity=52.2821576763486, Blast_Score=245, Evalue=3e-66,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 26110; Mature: 25979
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDK CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHCCCHHHHHHHH KNTIAAADSTYTKRLANVMSGLGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMT CCCEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC DDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGALGNPTLTALTSSQIADLGEQF CHHHHHHHHHHHCCEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH INAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAK HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH HIDARLAGGK HHHHHCCCCC >Mature Secondary Structure TRYARYAVPALACIALQAGCANMNMDSMTQAGGSLFSAASLSDANVKTLSDQSCAEMDK CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCCCCHHCCCHHHHHHHH KNTIAAADSTYTKRLANVMSGLGNTGLPLDAKVYMTKDVNAWAMANGCVRVYSGLMDLMT CCCEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC DDEVRGVVGHEIGHVALGHTKAAMQVAYGTSAARGALGALGNPTLTALTSSQIADLGEQF CHHHHHHHHHHHCCEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH INAQFSQRQESAADDYSFDLLTKNGANRQALASAFRKLASLDGGQSSMLSSHPGSLERAK HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHH HIDARLAGGK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2153656; 9278503; 1310091 [H]