Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542334
Identifier: 73542334
GI number: 73542334
Start: 2905655
End: 2906626
Strand: Direct
Name: 73542334
Synonym: Reut_A2649
Alternate gene names: NA
Gene position: 2905655-2906626 (Clockwise)
Preceding gene: 73542333
Following gene: 73542335
Centisome position: 76.33
GC content: 62.14
Gene sequence:
>972_bases ATGCAAGGCATCATTCAGGGGTTTCAGTCCGATCAGCTGATCGTGCTGACATTGATCTTCGTGGCGGCATTCGGCATGGT GTTTGGCGTGCTCTATGCGTTCTCACCGAACCGCATGCGCGGCAGGGCCGAGCAACTCGCGGGCCAGCCAGGCCAGGCAA GCGGCAGGTCCGGAAGGCAGCAGGCCTGGATCGACAAGCTCGTGCAATGGACGCAGCCGGTCTCGCGCCTGTCGCTGCCT AAGGAAGGATGGGAAGGCTCGCAGTTGCGCGTGCGCTTCATGAATGCCGGGTGGCGTAGCACAAGCGCCGCCCCGCTGTA CTTCACCGCCAAGACAATACTGGCAATCGCCCTGCCGATGATCGGCCTGATCGCGGTCAGCAATCAGCCGGCGCTACAGC AGCAGCACATCATGCTCGCCTTGCTGACGTTGCTTGCCGCCATCGGCTACTATCTGCCGAACACCGTGCTGTCGCACAAG GTGGCCGAACGCCAGCGCGCGGTATTCGAAGAGTTCCCGGACGTCATCGACCTCCTGACGGTATGCGTGGAAGCCGGCCT CGGCCTCGACGCGGCGCTGATGCGCGTGGCCGACGAACTGGCCCTGCGCTGCCCGGTCCTTGCCGACGAACTGCAGCTGA TGCTGCTGGAGCTGCGCTCCGGCTTCTCCAAGGAAAAGGCACTGTCCAATCTCTCGTTACGCACCGGGGTGGAAGATGTC GACAAGTTTGCATCCATGCTGATTCAGGCCGATCGCTTCGGTACCAGCCTGGGCGACTCCCTGCGCGTGCTGTCCGACAT GTTGCGCACCAAGCGACGCATGCGAGCGGAAGAACAGGCAGCCAAGATTGCGCTGAAGCTGTTGTTCCCGCTGATCTTCA CGATCTTCCCATCACTGCTGCTGGTACTGCTTGGCCCGGCATTCATCCAGATCTATCGCGTCCTGTTGCCGACCATGGCC GGCCAGGGATAG
Upstream 100 bases:
>100_bases GCAAGATCATCCGTATCCGCGTATGACGTCACGACGAGCAACGAACAGCGTAGTGCTCCGACACACACGGTATGGGCAAG TAGCCTGACGGGAGTCCATC
Downstream 100 bases:
>100_bases CGCTTCCGGGTATCCGGAAACGGTTCCCCCGGCTGTCTCCCGGTGCAATGCCGGCAAGACGGTCTTTTGCCCGGACCTGG CTCCGGGCCTTTTCGCTGTC
Product: type II secretion system protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC Related Transmembrane Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MQGIIQGFQSDQLIVLTLIFVAAFGMVFGVLYAFSPNRMRGRAEQLAGQPGQASGRSGRQQAWIDKLVQWTQPVSRLSLP KEGWEGSQLRVRFMNAGWRSTSAAPLYFTAKTILAIALPMIGLIAVSNQPALQQQHIMLALLTLLAAIGYYLPNTVLSHK VAERQRAVFEEFPDVIDLLTVCVEAGLGLDAALMRVADELALRCPVLADELQLMLLELRSGFSKEKALSNLSLRTGVEDV DKFASMLIQADRFGTSLGDSLRVLSDMLRTKRRMRAEEQAAKIALKLLFPLIFTIFPSLLLVLLGPAFIQIYRVLLPTMA GQG
Sequences:
>Translated_323_residues MQGIIQGFQSDQLIVLTLIFVAAFGMVFGVLYAFSPNRMRGRAEQLAGQPGQASGRSGRQQAWIDKLVQWTQPVSRLSLP KEGWEGSQLRVRFMNAGWRSTSAAPLYFTAKTILAIALPMIGLIAVSNQPALQQQHIMLALLTLLAAIGYYLPNTVLSHK VAERQRAVFEEFPDVIDLLTVCVEAGLGLDAALMRVADELALRCPVLADELQLMLLELRSGFSKEKALSNLSLRTGVEDV DKFASMLIQADRFGTSLGDSLRVLSDMLRTKRRMRAEEQAAKIALKLLFPLIFTIFPSLLLVLLGPAFIQIYRVLLPTMA GQG >Mature_323_residues MQGIIQGFQSDQLIVLTLIFVAAFGMVFGVLYAFSPNRMRGRAEQLAGQPGQASGRSGRQQAWIDKLVQWTQPVSRLSLP KEGWEGSQLRVRFMNAGWRSTSAAPLYFTAKTILAIALPMIGLIAVSNQPALQQQHIMLALLTLLAAIGYYLPNTVLSHK VAERQRAVFEEFPDVIDLLTVCVEAGLGLDAALMRVADELALRCPVLADELQLMLLELRSGFSKEKALSNLSLRTGVEDV DKFASMLIQADRFGTSLGDSLRVLSDMLRTKRRMRAEEQAAKIALKLLFPLIFTIFPSLLLVLLGPAFIQIYRVLLPTMA GQG
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35617; Mature: 35617
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGIIQGFQSDQLIVLTLIFVAAFGMVFGVLYAFSPNRMRGRAEQLAGQPGQASGRSGRQ CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHH QAWIDKLVQWTQPVSRLSLPKEGWEGSQLRVRFMNAGWRSTSAAPLYFTAKTILAIALPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH IGLIAVSNQPALQQQHIMLALLTLLAAIGYYLPNTVLSHKVAERQRAVFEEFPDVIDLLT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCVEAGLGLDAALMRVADELALRCPVLADELQLMLLELRSGFSKEKALSNLSLRTGVEDV HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH DKFASMLIQADRFGTSLGDSLRVLSDMLRTKRRMRAEEQAAKIALKLLFPLIFTIFPSLL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLLGPAFIQIYRVLLPTMAGQG HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQGIIQGFQSDQLIVLTLIFVAAFGMVFGVLYAFSPNRMRGRAEQLAGQPGQASGRSGRQ CCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHH QAWIDKLVQWTQPVSRLSLPKEGWEGSQLRVRFMNAGWRSTSAAPLYFTAKTILAIALPM HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH IGLIAVSNQPALQQQHIMLALLTLLAAIGYYLPNTVLSHKVAERQRAVFEEFPDVIDLLT HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCVEAGLGLDAALMRVADELALRCPVLADELQLMLLELRSGFSKEKALSNLSLRTGVEDV HHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH DKFASMLIQADRFGTSLGDSLRVLSDMLRTKRRMRAEEQAAKIALKLLFPLIFTIFPSLL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLLGPAFIQIYRVLLPTMAGQG HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA