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The map label for this gene is hofB [C]

Identifier: 73542332

GI number: 73542332

Start: 2903178

End: 2904557

Strand: Direct

Name: hofB [C]

Synonym: Reut_A2647

Alternate gene names: 73542332

Gene position: 2903178-2904557 (Clockwise)

Preceding gene: 73542331

Following gene: 73542333

Centisome position: 76.27

GC content: 63.91

Gene sequence:

>1380_bases
ATGTCGATCCGCGAACAGCTTGCCGGCGCCGGCCCTGCCTTTACGACCAATGGCCATGCCGCGATCCAGTTCACGACCGG
AGCGCCAGTCAGCACCACCGCGTCACCGGGCTACCATGCCCTCAAGCGCGAGGTGCACGAAGTCGTCCTGGACCGCGTGG
AACTGGAGCGCCTGGCGCGTTTTCCGCAAGAACAGGTGAGACAGGAAATCTCTACGCTGGTGAACCTGATCATCGACGAG
CAAAGGGTTCTGCTCAACGACAACGAACGACGCCAGCTGACGGTCGAGATCTACGACGAAATGTTCGGCTTTGGCCCGCT
GGAGCCACTGCTGAAGGACCCGACGGTTTCAGACATCCTGGTCAACACCGGGCGCCAGACCTATGTGGAGCGGCGCGGCA
AGCTCGAACTGACCGACGTCGTGTTCTATGACGATGCGCACCTGATGAAGGTGATCGAGAAGATTGTCTCGCGCGTGGGC
CGCCGCATCGACGAGACGAGCCCGATGGTGGACGCGCGCCTGCCGGATGGATCGCGCGTCAACGCCATCATTCCGCCATC
CGCCATCGACGGACCCCTGCTCTCGATCCGCCGCTTTTCCGTCAATCCGCTTCAGGTGTCGGACCTCGTGGAACTGCGCA
GCCTGACGCCGCCGATGGCGCAGATGCTGCAGGCATTGTCGAAGGCCAAGGTCAACGTGCTGGTGTCGGGAGGCACCGGC
AGCGGCAAGACCACGCTGTTGAACATCCTCTCGGGCTTCATCCCCGAGGACGAACGCGTGATCACCATCGAGGACGCCGC
CGAACTGCAACTGCGCCAGCCTCATGTGCTGCGGCTGGAAACGCGTCCGCCCAACATCGAGGGCAAGGGAGAGATCACGC
AGCGTGCGCTGGTGCGCAACGCGCTGCGGATGCGCCCGGACCGCATCATCCTGGGCGAGGTGCGCGGCGGCGAGGCCCTC
GACATGCTCAATGCCATGAACACGGGCCACGAAGGATCGCTGACCACCATCCACGCCAACACGCCGCGCGATGCCCTGAC
GCGCCTGGAGAACATGGTCAGCATGGCTGGCCTGACCATGCCGGCCAAGGCCATGCGGCAGCAGATCGCCTCGGCGATTA
CGGTGATCGTCCAGGCCGCGCGCCTGACCGATGGCCGGCGCAAGATTATCAGCATCTCGGAGATCACCGGCATGGAAGGC
GACATCATCAACATGCAGGAGATCTTCACCTTCCAGCGCACCGGCGTAGACAAGGACGGCACCGTGCGCGGTCATTTCCG
CGCCACGGGGGTGTACCCCAAGTTCGCCGAACGCCTGCGCGTGTTCGGCGTGGGCCTGCCCGACGAAATCTACGATCCGG
CCAAGCGCCATGAAGTCTGA

Upstream 100 bases:

>100_bases
GCCGTATCGCCGCTGCGTCGCCTGATGTTGCGCACCAAGAGCACCTGATGATGGTCTGCCTGGCCTGCACTGAACCCAAA
TCAAATTGAAGGAGCCCATC

Downstream 100 bases:

>100_bases
GGCGGCCACGGGATATCACAGCGAATACGCCATGCGGAGACACTCATGAGCATGATCTTCTATGCCTTTGGCATCCTGCT
GTTTGTGGCCGTGGTGCTCT

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSIREQLAGAGPAFTTNGHAAIQFTTGAPVSTTASPGYHALKREVHEVVLDRVELERLARFPQEQVRQEISTLVNLIIDE
QRVLLNDNERRQLTVEIYDEMFGFGPLEPLLKDPTVSDILVNTGRQTYVERRGKLELTDVVFYDDAHLMKVIEKIVSRVG
RRIDETSPMVDARLPDGSRVNAIIPPSAIDGPLLSIRRFSVNPLQVSDLVELRSLTPPMAQMLQALSKAKVNVLVSGGTG
SGKTTLLNILSGFIPEDERVITIEDAAELQLRQPHVLRLETRPPNIEGKGEITQRALVRNALRMRPDRIILGEVRGGEAL
DMLNAMNTGHEGSLTTIHANTPRDALTRLENMVSMAGLTMPAKAMRQQIASAITVIVQAARLTDGRRKIISISEITGMEG
DIINMQEIFTFQRTGVDKDGTVRGHFRATGVYPKFAERLRVFGVGLPDEIYDPAKRHEV

Sequences:

>Translated_459_residues
MSIREQLAGAGPAFTTNGHAAIQFTTGAPVSTTASPGYHALKREVHEVVLDRVELERLARFPQEQVRQEISTLVNLIIDE
QRVLLNDNERRQLTVEIYDEMFGFGPLEPLLKDPTVSDILVNTGRQTYVERRGKLELTDVVFYDDAHLMKVIEKIVSRVG
RRIDETSPMVDARLPDGSRVNAIIPPSAIDGPLLSIRRFSVNPLQVSDLVELRSLTPPMAQMLQALSKAKVNVLVSGGTG
SGKTTLLNILSGFIPEDERVITIEDAAELQLRQPHVLRLETRPPNIEGKGEITQRALVRNALRMRPDRIILGEVRGGEAL
DMLNAMNTGHEGSLTTIHANTPRDALTRLENMVSMAGLTMPAKAMRQQIASAITVIVQAARLTDGRRKIISISEITGMEG
DIINMQEIFTFQRTGVDKDGTVRGHFRATGVYPKFAERLRVFGVGLPDEIYDPAKRHEV
>Mature_458_residues
SIREQLAGAGPAFTTNGHAAIQFTTGAPVSTTASPGYHALKREVHEVVLDRVELERLARFPQEQVRQEISTLVNLIIDEQ
RVLLNDNERRQLTVEIYDEMFGFGPLEPLLKDPTVSDILVNTGRQTYVERRGKLELTDVVFYDDAHLMKVIEKIVSRVGR
RIDETSPMVDARLPDGSRVNAIIPPSAIDGPLLSIRRFSVNPLQVSDLVELRSLTPPMAQMLQALSKAKVNVLVSGGTGS
GKTTLLNILSGFIPEDERVITIEDAAELQLRQPHVLRLETRPPNIEGKGEITQRALVRNALRMRPDRIILGEVRGGEALD
MLNAMNTGHEGSLTTIHANTPRDALTRLENMVSMAGLTMPAKAMRQQIASAITVIVQAARLTDGRRKIISISEITGMEGD
IINMQEIFTFQRTGVDKDGTVRGHFRATGVYPKFAERLRVFGVGLPDEIYDPAKRHEV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=194, Percent_Identity=29.3814432989691, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 50851; Mature: 50720

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIREQLAGAGPAFTTNGHAAIQFTTGAPVSTTASPGYHALKREVHEVVLDRVELERLAR
CCHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPQEQVRQEISTLVNLIIDEQRVLLNDNERRQLTVEIYDEMFGFGPLEPLLKDPTVSDIL
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHEEHHHHHCCCCCCHHHCCCCHHHHH
VNTGRQTYVERRGKLELTDVVFYDDAHLMKVIEKIVSRVGRRIDETSPMVDARLPDGSRV
HCCCHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
NAIIPPSAIDGPLLSIRRFSVNPLQVSDLVELRSLTPPMAQMLQALSKAKVNVLVSGGTG
EEEECCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCC
SGKTTLLNILSGFIPEDERVITIEDAAELQLRQPHVLRLETRPPNIEGKGEITQRALVRN
CCHHHHHHHHHHCCCCCCEEEEECCCHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHH
ALRMRPDRIILGEVRGGEALDMLNAMNTGHEGSLTTIHANTPRDALTRLENMVSMAGLTM
HHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
PAKAMRQQIASAITVIVQAARLTDGRRKIISISEITGMEGDIINMQEIFTFQRTGVDKDG
CHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHCCCCCCEECHHHHHHHHHCCCCCCC
TVRGHFRATGVYPKFAERLRVFGVGLPDEIYDPAKRHEV
CEEEEEEECCCCHHHHHHHHHHCCCCCHHHCCCHHHCCC
>Mature Secondary Structure 
SIREQLAGAGPAFTTNGHAAIQFTTGAPVSTTASPGYHALKREVHEVVLDRVELERLAR
CHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
FPQEQVRQEISTLVNLIIDEQRVLLNDNERRQLTVEIYDEMFGFGPLEPLLKDPTVSDIL
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHEEHHHHHCCCCCCHHHCCCCHHHHH
VNTGRQTYVERRGKLELTDVVFYDDAHLMKVIEKIVSRVGRRIDETSPMVDARLPDGSRV
HCCCHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
NAIIPPSAIDGPLLSIRRFSVNPLQVSDLVELRSLTPPMAQMLQALSKAKVNVLVSGGTG
EEEECCCCCCCCHHHHEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCC
SGKTTLLNILSGFIPEDERVITIEDAAELQLRQPHVLRLETRPPNIEGKGEITQRALVRN
CCHHHHHHHHHHCCCCCCEEEEECCCHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHH
ALRMRPDRIILGEVRGGEALDMLNAMNTGHEGSLTTIHANTPRDALTRLENMVSMAGLTM
HHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCC
PAKAMRQQIASAITVIVQAARLTDGRRKIISISEITGMEGDIINMQEIFTFQRTGVDKDG
CHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHCCCCCCEECHHHHHHHHHCCCCCCC
TVRGHFRATGVYPKFAERLRVFGVGLPDEIYDPAKRHEV
CEEEEEEECCCCHHHHHHHHHHCCCCCHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]