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The map label for this gene is hofQ [C]

Identifier: 73542329

GI number: 73542329

Start: 2899589

End: 2901490

Strand: Direct

Name: hofQ [C]

Synonym: Reut_A2644

Alternate gene names: 73542329

Gene position: 2899589-2901490 (Clockwise)

Preceding gene: 73542328

Following gene: 73542330

Centisome position: 76.17

GC content: 68.24

Gene sequence:

>1902_bases
ATGAACCAGAAACGATCCGAAGCCGCCGGCGGCACCCGCATCCTGGTGCTGGCTGCCATCCTCTGCACACCGCTGGCCGC
CGCGGCGCAGGTCGCCGTGGAGGCCGGGAACCTGACGAAGGCCACCTCGCCTGCAGCCGCCAAGGCGCCCCAGGCCCCGA
TGCAGATGACCATCAGCATGGCGCCAGCCGGCACCGCACCGGTCGGTGCCGCCGCGCCGGTGCCGGTCGCCGATGCCCGC
GGCCCCAATTGCACCGGCGCGGTCCGCCAGGAATCGAGCGTGATTGTCCCGGTCGGCAAGTCCCAGCTGATCACGCTGCA
GGAGCCGGTAAAGAATCGCACGCTGGGCAACCCGAACGTGGTGCAGGCCACGATGGTATCGGCACAGACGCTCTACGTAC
TGGGCCGCACGGTGGGAACCACCAACATGATCGTGCAGGGCCGCAGCGGCAGCTGCAGCATCATCAACGTGGTGGTGAAC
GCCGACGCCGGCGGACTGCAGACATCGCTCAGCCAACTCCTGCCCGGTGAACCGGGCATCCGCGTGATGACTGCCGCGGA
CAACCTGGTGCTGACAGGCAGTGTCACCAATGCGCAATCGGCCCTGCAGGCCATGGATATTGCACAGGCCTATGCCAATG
CAGCGCAGGTCGGTGCAGGCGGCGATGCCGGCAAGAAGGGCGGCGTGCTCAACATGCTCTCGGTCGACACGCCGCAACAG
GTGATGCTGGAAGTGAAGGTGGCGGAGGTCTCGAAGACGCTGCTGAATCAACTTGGCTCGTCGGTGAACCTGCAAGGCGG
CTTCGGCTCGTGGACCGGCGGACTGGTGACATCGTTGCTGACCGGCGCTTCCGGCGCGATCTTCGGCAGCAAGGCCAACA
ACAAGCCATTCAATTTTGCCATCGACGCGCAGAAGAACGACAGCCTGGTGAAGATCCTGGCCGAGCCGAACCTCGTCACC
ATCAGCGGGCAGGAAGCGAGCTTCCTCGCCGGCGGCAAGATCTACATCCCGGTGGCGCAGGCCAACGTGCTGAATGGTGC
CGGCACGGTCACGCTGCAGGAAGAAGAGTTTGGTGTGGGACTGAAGTTCACGCCTACGGTGCTCGCAAATGGCCGCATCC
ACCTGAAGGTGGCGCCGGAAGTGTCCGAGCTGTCGCCTACCGGCGCGACCGTCAGCGGCGGCACTCTGGCTGGCCAGTCC
GTGCTTCCGCTCATCACCACCCGCCGCGCCTCCACCACCGTGCAGATGCGTGACGGCGAAAGCTTTGCCATCGGCGGCCT
GCTGCAGGACAGTGCGCGCGGTTCGCTCAAGGCGCTGCCGGGTGCTGGCGAAGTGCCGGTGCTGGGCACGCTGTTCCGCA
GCACGCAGTACCAGCAGGACCTGACCGAACTGGTGTTCATCATCACGCCACGCCTGGTCAAGCCGATGGCGACCAACAAC
TACCCGCTGCCCACCGACAGCTTCACCACGCCTGATCCGTTCTCGCTGTACTTCATGGGCAATATGGAAGGCCACCGCAA
TATGCCGCCCGCTCCGGCGCCGGCCCCGTCGCAGCCAGCACCAGCCGCAGCGCCCGCCCCCGCGCCGTCGGCCCCGCGTA
GCGAAGCCACCCAGGCCACGTCGATCTCGGCCATGCCGGAAGGCCGGCCGCTGGAGGAGCCGTCCACGGTCGCGGCTCCG
TCCGCTGCCACGCCCCCTGCACCGGTCCCGGCGGCCCCCGCGTCCCCGCGGCTAGCTGCCGCGGCACCCAAGGCGCCCGA
GGTACGCGCACGCAGCGTGGCGGCGCTGCCGCCGCCGGAGGACTCCGCCGCGCGTATCGCCCGCATCGAAGCCACCGCCG
CGCGCCTGGCACAGGCGCGGACGGCAGGCTCGGCCGGCGGCACCCCATCGGACAGCAACTGA

Upstream 100 bases:

>100_bases
TGGCAGGCATCCAGGGCGGCATCGAGTGCTTCTGAACGCGTAGCACACGGCATCCACGAATTTCGAGCTGCAACACAGCC
TCTCCGGGGGGAGATTCAAA

Downstream 100 bases:

>100_bases
GCGTCGCGCCACCAGCAAACCGGAGAACGATCATGAACAAGATCTCGAAGCTTTCGCGCGGCGCCGCCGCCCTGGTACTG
GGCACCCTGTCGTGCCTCGG

Product: type II and III secretion system protein:transport-associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MNQKRSEAAGGTRILVLAAILCTPLAAAAQVAVEAGNLTKATSPAAAKAPQAPMQMTISMAPAGTAPVGAAAPVPVADAR
GPNCTGAVRQESSVIVPVGKSQLITLQEPVKNRTLGNPNVVQATMVSAQTLYVLGRTVGTTNMIVQGRSGSCSIINVVVN
ADAGGLQTSLSQLLPGEPGIRVMTAADNLVLTGSVTNAQSALQAMDIAQAYANAAQVGAGGDAGKKGGVLNMLSVDTPQQ
VMLEVKVAEVSKTLLNQLGSSVNLQGGFGSWTGGLVTSLLTGASGAIFGSKANNKPFNFAIDAQKNDSLVKILAEPNLVT
ISGQEASFLAGGKIYIPVAQANVLNGAGTVTLQEEEFGVGLKFTPTVLANGRIHLKVAPEVSELSPTGATVSGGTLAGQS
VLPLITTRRASTTVQMRDGESFAIGGLLQDSARGSLKALPGAGEVPVLGTLFRSTQYQQDLTELVFIITPRLVKPMATNN
YPLPTDSFTTPDPFSLYFMGNMEGHRNMPPAPAPAPSQPAPAAAPAPAPSAPRSEATQATSISAMPEGRPLEEPSTVAAP
SAATPPAPVPAAPASPRLAAAAPKAPEVRARSVAALPPPEDSAARIARIEATAARLAQARTAGSAGGTPSDSN

Sequences:

>Translated_633_residues
MNQKRSEAAGGTRILVLAAILCTPLAAAAQVAVEAGNLTKATSPAAAKAPQAPMQMTISMAPAGTAPVGAAAPVPVADAR
GPNCTGAVRQESSVIVPVGKSQLITLQEPVKNRTLGNPNVVQATMVSAQTLYVLGRTVGTTNMIVQGRSGSCSIINVVVN
ADAGGLQTSLSQLLPGEPGIRVMTAADNLVLTGSVTNAQSALQAMDIAQAYANAAQVGAGGDAGKKGGVLNMLSVDTPQQ
VMLEVKVAEVSKTLLNQLGSSVNLQGGFGSWTGGLVTSLLTGASGAIFGSKANNKPFNFAIDAQKNDSLVKILAEPNLVT
ISGQEASFLAGGKIYIPVAQANVLNGAGTVTLQEEEFGVGLKFTPTVLANGRIHLKVAPEVSELSPTGATVSGGTLAGQS
VLPLITTRRASTTVQMRDGESFAIGGLLQDSARGSLKALPGAGEVPVLGTLFRSTQYQQDLTELVFIITPRLVKPMATNN
YPLPTDSFTTPDPFSLYFMGNMEGHRNMPPAPAPAPSQPAPAAAPAPAPSAPRSEATQATSISAMPEGRPLEEPSTVAAP
SAATPPAPVPAAPASPRLAAAAPKAPEVRARSVAALPPPEDSAARIARIEATAARLAQARTAGSAGGTPSDSN
>Mature_633_residues
MNQKRSEAAGGTRILVLAAILCTPLAAAAQVAVEAGNLTKATSPAAAKAPQAPMQMTISMAPAGTAPVGAAAPVPVADAR
GPNCTGAVRQESSVIVPVGKSQLITLQEPVKNRTLGNPNVVQATMVSAQTLYVLGRTVGTTNMIVQGRSGSCSIINVVVN
ADAGGLQTSLSQLLPGEPGIRVMTAADNLVLTGSVTNAQSALQAMDIAQAYANAAQVGAGGDAGKKGGVLNMLSVDTPQQ
VMLEVKVAEVSKTLLNQLGSSVNLQGGFGSWTGGLVTSLLTGASGAIFGSKANNKPFNFAIDAQKNDSLVKILAEPNLVT
ISGQEASFLAGGKIYIPVAQANVLNGAGTVTLQEEEFGVGLKFTPTVLANGRIHLKVAPEVSELSPTGATVSGGTLAGQS
VLPLITTRRASTTVQMRDGESFAIGGLLQDSARGSLKALPGAGEVPVLGTLFRSTQYQQDLTELVFIITPRLVKPMATNN
YPLPTDSFTTPDPFSLYFMGNMEGHRNMPPAPAPAPSQPAPAAAPAPAPSAPRSEATQATSISAMPEGRPLEEPSTVAAP
SAATPPAPVPAAPASPRLAAAAPKAPEVRARSVAALPPPEDSAARIARIEATAARLAQARTAGSAGGTPSDSN

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=243, Percent_Identity=28.3950617283951, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI87082242, Length=208, Percent_Identity=27.4038461538462, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 64009; Mature: 64009

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKRSEAAGGTRILVLAAILCTPLAAAAQVAVEAGNLTKATSPAAAKAPQAPMQMTISM
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCCCCCEEEEEEE
APAGTAPVGAAAPVPVADARGPNCTGAVRQESSVIVPVGKSQLITLQEPVKNRTLGNPNV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEECCCHHHCCCCCCCE
VQATMVSAQTLYVLGRTVGTTNMIVQGRSGSCSIINVVVNADAGGLQTSLSQLLPGEPGI
EEEEHHHHEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCE
RVMTAADNLVLTGSVTNAQSALQAMDIAQAYANAAQVGAGGDAGKKGGVLNMLSVDTPQQ
EEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH
VMLEVKVAEVSKTLLNQLGSSVNLQGGFGSWTGGLVTSLLTGASGAIFGSKANNKPFNFA
EEEEEHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEE
IDAQKNDSLVKILAEPNLVTISGQEASFLAGGKIYIPVAQANVLNGAGTVTLQEEEFGVG
EECCCCCCEEEEEECCCEEEEECCCCEEEECCEEEEEEECCEEECCCCEEEEEHHHCCCC
LKFTPTVLANGRIHLKVAPEVSELSPTGATVSGGTLAGQSVLPLITTRRASTTVQMRDGE
EEECCEEEECCEEEEEECCCHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEECCC
SFAIGGLLQDSARGSLKALPGAGEVPVLGTLFRSTQYQQDLTELVFIITPRLVKPMATNN
EEEECCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPLPTDSFTTPDPFSLYFMGNMEGHRNMPPAPAPAPSQPAPAAAPAPAPSAPRSEATQAT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
SISAMPEGRPLEEPSTVAAPSAATPPAPVPAAPASPRLAAAAPKAPEVRARSVAALPPPE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCC
DSAARIARIEATAARLAQARTAGSAGGTPSDSN
CCHHHEEHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNQKRSEAAGGTRILVLAAILCTPLAAAAQVAVEAGNLTKATSPAAAKAPQAPMQMTISM
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCCCCCEEEEEEE
APAGTAPVGAAAPVPVADARGPNCTGAVRQESSVIVPVGKSQLITLQEPVKNRTLGNPNV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCEEEEECCCHHHCCCCCCCE
VQATMVSAQTLYVLGRTVGTTNMIVQGRSGSCSIINVVVNADAGGLQTSLSQLLPGEPGI
EEEEHHHHEEEEEEECCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCE
RVMTAADNLVLTGSVTNAQSALQAMDIAQAYANAAQVGAGGDAGKKGGVLNMLSVDTPQQ
EEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHH
VMLEVKVAEVSKTLLNQLGSSVNLQGGFGSWTGGLVTSLLTGASGAIFGSKANNKPFNFA
EEEEEHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEE
IDAQKNDSLVKILAEPNLVTISGQEASFLAGGKIYIPVAQANVLNGAGTVTLQEEEFGVG
EECCCCCCEEEEEECCCEEEEECCCCEEEECCEEEEEEECCEEECCCCEEEEEHHHCCCC
LKFTPTVLANGRIHLKVAPEVSELSPTGATVSGGTLAGQSVLPLITTRRASTTVQMRDGE
EEECCEEEECCEEEEEECCCHHHCCCCCCEECCCCCCCCCEEEEEEECCCCEEEEEECCC
SFAIGGLLQDSARGSLKALPGAGEVPVLGTLFRSTQYQQDLTELVFIITPRLVKPMATNN
EEEECCEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
YPLPTDSFTTPDPFSLYFMGNMEGHRNMPPAPAPAPSQPAPAAAPAPAPSAPRSEATQAT
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
SISAMPEGRPLEEPSTVAAPSAATPPAPVPAAPASPRLAAAAPKAPEVRARSVAALPPPE
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCC
DSAARIARIEATAARLAQARTAGSAGGTPSDSN
CCHHHEEHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]