Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is yceA [C]
Identifier: 73542220
GI number: 73542220
Start: 2780775
End: 2781623
Strand: Direct
Name: yceA [C]
Synonym: Reut_A2535
Alternate gene names: 73542220
Gene position: 2780775-2781623 (Clockwise)
Preceding gene: 73542216
Following gene: 73542226
Centisome position: 73.05
GC content: 61.96
Gene sequence:
>849_bases ATGCAGATCGTCAACATCTCCGCTTACAAGTTCGTCTCACTCAACGACATCGAGACGTTGCGGCCGGAAATGCGCTCGCG CTGCGAGGATCTCGAGCTGAAGGGCACCATCCTGCTCGCGCCGGAAGGTATCAACATGTTCCTGGCCGGCCCGCGCGAAT CCATCGACGGTTTCATGGCATGGCTGCACGCCGATACGCGCTTCGCAGATATCGCGCCGAAGGAAAGCCTGTCGGACAAC CAGCCCTTCAAGCGCATGCTGGTGCGCGCGAAGAAGGAAATCATCACGATGAAGCGCCCGCTGATCCGTCCCGAGGAAGG GCGCGCGCCGTCGGTGCGGCCGGTGGATCTCAAGCGCTGGCTCGACCAGGGACACGACGATGAAGGTCGCCCCGTGGTGA TGCTCGATACGCGTAACGATTTCGAAGTGGCGGTCGGGACGTTCGACAACGTGGTCGAGTACAACCTCACGAAGTTCAGC GAATTTCCCGACGTGATCGAAGCCCGCAAGGCGGAATTCGAGGGCAAGACCGTGGTGTCGTTCTGCACGGGCGGCATCCG CTGCGAGAAGGCCGCGATCCACATGCAGGAAGTCGGCATCGGCCACGTCTACCAGCTTGAAGGCGGCATCCTCAAGTATT TCGAGGAAGTCGGCGGCGATCATTACCGCGGCGATTGCTTTGTTTTCGACTATCGCACGGCACTCAATCCGAACCTCGAA CCCGCCGGCCCGAAGCAGTGCTTCGCCTGCCGCGCCGTGGTGACGGCCGAAGAGCAGCAAAGCCCGCACTACGTGGTCGG CAAGAGCTGCCCGCATTGCGTCGGGCGGCACGATCAGGCAGCGGCCTGA
Upstream 100 bases:
>100_bases GGAAATGCGGGCCGGCTGCAGCCCGACGCGCTATAATTTCGCCTTTCCAATCAGGCAGTTATCACGCGCTTGCGCGCGTG TCGGCAGCGCGGCCCTTCTC
Downstream 100 bases:
>100_bases TTACCCGAGGGTTATGCGGCGAGCAGGTGGTAGAGGTTACGCAGCATGCCCGCCGTCGCACCCCAGATAAAGCGATGGCC ACCACCTTCGCGCGGGAACG
Product: rhodanese superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MQIVNISAYKFVSLNDIETLRPEMRSRCEDLELKGTILLAPEGINMFLAGPRESIDGFMAWLHADTRFADIAPKESLSDN QPFKRMLVRAKKEIITMKRPLIRPEEGRAPSVRPVDLKRWLDQGHDDEGRPVVMLDTRNDFEVAVGTFDNVVEYNLTKFS EFPDVIEARKAEFEGKTVVSFCTGGIRCEKAAIHMQEVGIGHVYQLEGGILKYFEEVGGDHYRGDCFVFDYRTALNPNLE PAGPKQCFACRAVVTAEEQQSPHYVVGKSCPHCVGRHDQAAA
Sequences:
>Translated_282_residues MQIVNISAYKFVSLNDIETLRPEMRSRCEDLELKGTILLAPEGINMFLAGPRESIDGFMAWLHADTRFADIAPKESLSDN QPFKRMLVRAKKEIITMKRPLIRPEEGRAPSVRPVDLKRWLDQGHDDEGRPVVMLDTRNDFEVAVGTFDNVVEYNLTKFS EFPDVIEARKAEFEGKTVVSFCTGGIRCEKAAIHMQEVGIGHVYQLEGGILKYFEEVGGDHYRGDCFVFDYRTALNPNLE PAGPKQCFACRAVVTAEEQQSPHYVVGKSCPHCVGRHDQAAA >Mature_282_residues MQIVNISAYKFVSLNDIETLRPEMRSRCEDLELKGTILLAPEGINMFLAGPRESIDGFMAWLHADTRFADIAPKESLSDN QPFKRMLVRAKKEIITMKRPLIRPEEGRAPSVRPVDLKRWLDQGHDDEGRPVVMLDTRNDFEVAVGTFDNVVEYNLTKFS EFPDVIEARKAEFEGKTVVSFCTGGIRCEKAAIHMQEVGIGHVYQLEGGILKYFEEVGGDHYRGDCFVFDYRTALNPNLE PAGPKQCFACRAVVTAEEQQSPHYVVGKSCPHCVGRHDQAAA
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=282, Percent_Identity=28.3687943262411, Blast_Score=108, Evalue=5e-24, Organism=Escherichia coli, GI1787294, Length=238, Percent_Identity=28.1512605042017, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2535_CUPPJ (Q46Y87)
Other databases:
- EMBL: CP000090 - RefSeq: YP_296740.1 - ProteinModelPortal: Q46Y87 - GeneID: 3609307 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A2535 - NMPDR: fig|264198.3.peg.3279 - HOGENOM: HBG366219 - OMA: FDNALDY - ProtClustDB: PRK05320 - BioCyc: REUT264198:REUT_A2535-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 31752; Mature: 31752
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 182-182
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVNISAYKFVSLNDIETLRPEMRSRCEDLELKGTILLAPEGINMFLAGPRESIDGFMA CEEEEECEEEEEECCCHHHHHHHHHHHHCCCEECEEEEECCCCCEEEEECCHHHHHHHHH WLHADTRFADIAPKESLSDNQPFKRMLVRAKKEIITMKRPLIRPEEGRAPSVRPVDLKRW HHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LDQGHDDEGRPVVMLDTRNDFEVAVGTFDNVVEYNLTKFSEFPDVIEARKAEFEGKTVVS HHCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHCHHHHHCCHHHHHHHHHCCCCCEEEE FCTGGIRCEKAAIHMQEVGIGHVYQLEGGILKYFEEVGGDHYRGDCFVFDYRTALNPNLE ECCCCCEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCC PAGPKQCFACRAVVTAEEQQSPHYVVGKSCPHCVGRHDQAAA CCCCHHHHHHHHHEEHHCCCCCCEEECCCCCHHHCCCCCCCC >Mature Secondary Structure MQIVNISAYKFVSLNDIETLRPEMRSRCEDLELKGTILLAPEGINMFLAGPRESIDGFMA CEEEEECEEEEEECCCHHHHHHHHHHHHCCCEECEEEEECCCCCEEEEECCHHHHHHHHH WLHADTRFADIAPKESLSDNQPFKRMLVRAKKEIITMKRPLIRPEEGRAPSVRPVDLKRW HHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH LDQGHDDEGRPVVMLDTRNDFEVAVGTFDNVVEYNLTKFSEFPDVIEARKAEFEGKTVVS HHCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHCHHHHHCCHHHHHHHHHCCCCCEEEE FCTGGIRCEKAAIHMQEVGIGHVYQLEGGILKYFEEVGGDHYRGDCFVFDYRTALNPNLE ECCCCCEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCC PAGPKQCFACRAVVTAEEQQSPHYVVGKSCPHCVGRHDQAAA CCCCHHHHHHHHHEEHHCCCCCCEEECCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA