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The map label for this gene is ytfA [H]

Identifier: 73542195

GI number: 73542195

Start: 2751073

End: 2751810

Strand: Direct

Name: ytfA [H]

Synonym: Reut_A2510

Alternate gene names: 73542195

Gene position: 2751073-2751810 (Clockwise)

Preceding gene: 73542193

Following gene: 73542200

Centisome position: 72.27

GC content: 65.58

Gene sequence:

>738_bases
ATGACCATCAAGACCGCAACCCAGCGCGCGGCAGTCGGAACGCGCGCCCGGCAGGCGCAGGACAGCCGTGACCGGATCCT
GAAGGCGGCCATCAAGGTCTTTGCGCAGCGCGGTTACGACGGCGGACGCATCGAACGCATTTCCTCGCTCGCCAAGACCT
ACGACCGGATGATCTATTACTACTTCGGCAGCAAGGAAAAGCTGTTCGTCGAAGTGCTCGAGACCATCTACCTGCAGCTC
AACGAAGCCGAGCAGAAACTCGAAGGCGAACTCGACGCTGCCGATCCGGTGCGCGCCCTGTCGCAACTGATCGACTTCAT
CTGGCACTACTACCTGGAGCATCCGGAGTTCGTCGCGATCCTGACCAGCGAGAACATCAGCCAGGGCAAGCACGCGCGCA
AGTCGGTGCGGTTGCGCGAGATCTCCAGCTACGCGTTGTCCGTGCTCGACGGCATTCTGTCGCGCGGCAAGGCGGCGGGA
CTGTTCCGGCCCGACGCCGGGCCGCGAGACGTCTACATGGTCATCGCCTCGCTCGGCTACTTCTACAACTCGAACCATCA
TACGCTCAGCGCCTTCCTGGGCGAGCCGATGATGGGCGCGCCCGCGCTCGCGCATTGGCGCGATGTGATCCAGCAGACAG
TGCTGCGCGCGGTGGCAGTGCCGGGCGCCGTTCCCGACGCCCCGCCCGCGCCGCCTGCCGGCAAACCGGCGAAGGCCAGG
CGCGCCGCCGCAGGCTGA

Upstream 100 bases:

>100_bases
GTCATGGGTCGATTATTTTTGCCGCTTTGCGTGGGGCGGCACCCGCTATGCCACCGTTATACTGCCCTCCAACAGACATC
ATGATGCCGAGCCATCCAAC

Downstream 100 bases:

>100_bases
GCGTCGCATCAGGCGCACGGCCGCGGGTCGCAACGCGACTCAGGCTGCCGCGCTCACGCCGGCCGGCGCCGCCTTGGCGA
TCTGCGCGAGCGCTTCATCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTIKTATQRAAVGTRARQAQDSRDRILKAAIKVFAQRGYDGGRIERISSLAKTYDRMIYYYFGSKEKLFVEVLETIYLQL
NEAEQKLEGELDAADPVRALSQLIDFIWHYYLEHPEFVAILTSENISQGKHARKSVRLREISSYALSVLDGILSRGKAAG
LFRPDAGPRDVYMVIASLGYFYNSNHHTLSAFLGEPMMGAPALAHWRDVIQQTVLRAVAVPGAVPDAPPAPPAGKPAKAR
RAAAG

Sequences:

>Translated_245_residues
MTIKTATQRAAVGTRARQAQDSRDRILKAAIKVFAQRGYDGGRIERISSLAKTYDRMIYYYFGSKEKLFVEVLETIYLQL
NEAEQKLEGELDAADPVRALSQLIDFIWHYYLEHPEFVAILTSENISQGKHARKSVRLREISSYALSVLDGILSRGKAAG
LFRPDAGPRDVYMVIASLGYFYNSNHHTLSAFLGEPMMGAPALAHWRDVIQQTVLRAVAVPGAVPDAPPAPPAGKPAKAR
RAAAG
>Mature_244_residues
TIKTATQRAAVGTRARQAQDSRDRILKAAIKVFAQRGYDGGRIERISSLAKTYDRMIYYYFGSKEKLFVEVLETIYLQLN
EAEQKLEGELDAADPVRALSQLIDFIWHYYLEHPEFVAILTSENISQGKHARKSVRLREISSYALSVLDGILSRGKAAGL
FRPDAGPRDVYMVIASLGYFYNSNHHTLSAFLGEPMMGAPALAHWRDVIQQTVLRAVAVPGAVPDAPPAPPAGKPAKARR
AAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015893
- InterPro:   IPR011075 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27074; Mature: 26943

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKTATQRAAVGTRARQAQDSRDRILKAAIKVFAQRGYDGGRIERISSLAKTYDRMIYY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEE
YFGSKEKLFVEVLETIYLQLNEAEQKLEGELDAADPVRALSQLIDFIWHYYLEHPEFVAI
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
LTSENISQGKHARKSVRLREISSYALSVLDGILSRGKAAGLFRPDAGPRDVYMVIASLGY
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
FYNSNHHTLSAFLGEPMMGAPALAHWRDVIQQTVLRAVAVPGAVPDAPPAPPAGKPAKAR
HHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RAAAG
HCCCC
>Mature Secondary Structure 
TIKTATQRAAVGTRARQAQDSRDRILKAAIKVFAQRGYDGGRIERISSLAKTYDRMIYY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEEE
YFGSKEKLFVEVLETIYLQLNEAEQKLEGELDAADPVRALSQLIDFIWHYYLEHPEFVAI
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
LTSENISQGKHARKSVRLREISSYALSVLDGILSRGKAAGLFRPDAGPRDVYMVIASLGY
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
FYNSNHHTLSAFLGEPMMGAPALAHWRDVIQQTVLRAVAVPGAVPDAPPAPPAGKPAKAR
HHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
RAAAG
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]