Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is ytfP [H]
Identifier: 73542144
GI number: 73542144
Start: 2697735
End: 2699009
Strand: Direct
Name: ytfP [H]
Synonym: Reut_A2458
Alternate gene names: 73542144
Gene position: 2697735-2699009 (Clockwise)
Preceding gene: 73542142
Following gene: 73542146
Centisome position: 70.87
GC content: 67.92
Gene sequence:
>1275_bases ATGCCGTCCACCGATATCCCGTCCTCCACGCCCACCATCCTTCCGGTCGAAGCCGCCGTGATCGGTGGCGGCCCTGCAGG CCTGATGGCGGCCGAGGTGCTGGCGTCTCGCGGCGTGCGCGTGCATGTGTTCGATGCCATGCCGTCGGTGGGCCGCAAGT TCCTGATGGCCGGCAAGAGCGGCATGAACCTCACGCACGCCGAGCCCGAGCCGGCATTCACCGGGCGTTATGGCGAACGT GCGGATGTCATCGCGCCAATGCTCGCGGATTTCGGCGCGCAAACGCTGCGCGAGTGGGTACACGGGCTCGGCATCGAAAC CTTCGTCGGCAGTTCAGGCCGCGTCTTTCCGACCGACATGAAGGCCGCGCCGATGCTGCGCGCGTGGCTGCATCGCCTGC GCGACAGCGGCGTGGAGTTCCATATGCGGCACCGCTGGGTCGGCTGGACGGAGGATGCATCGCGCGCGCTGCGTTTCGCC ACGCCGCAAGGCGAACAGCACGTGCAGGCGAACGCCGTGATCCTCGCGCTCGGCGGTGCAAGCTGGGCACGACTCGGTTC GGATGGTGCATGGGTGCCGCTGCTGGCGCAGCATGGCGTCGATATCGCCGCGCTGCGGCCGGCGAACTGCGGTTTCGACG TGGCGTGGAGCGCGATGTTCTCCGAGCGCCATGCCGGCAACCCGGTCAAACCCGTCGCGCTCGCCGTGACCGACGTGAAC GGCAACGCGCACTACCGGCAGGGCGAGTTCGTGATCAGCGCCGGTGGCATCGAAGGCAGCCTGGTCTATGCGCTGTCCGC GCCGATCCGTGATTTGATCGAGCGCGATGGTGAAGCGGTGGTTCACCTGGATCTGCTGCCCGACCGGGACGCGCAGCGCG TGCTGGCCGAGGTATCGCATCCGCGTGGCTCGCGCTCGCTGTCGAGCCATTTGCAGAGCCGGCTAGGCATTACGGGCGTG AAGGCCGGGCTGCTGCGCGAGTGCCTGTCGAAGGAAGCAATGCATGACACGGTCACGCTGGCGGCCGCTATCAAGGCTTT GCCGCTGCGCCTGTTGCGTGCGCGGCCCATCGATGAAGTCATCAGCAGCGCAGGCGGCGTTCGCTTTGAAGCGATGAACC CGCACCTGATGCTCAATGCGCTTCCCGGCGTGTTCTGCGCCGGCGAGATGCTGGACTGGGAAGCGCCGACCGGCGGCTAC CTGCTCACGGCGTGCTTCGCGAGCGGCCGCACCGCCGGTCAGGGCGCGGCCGACTGGCTGATCAGCGGCCGTTGA
Upstream 100 bases:
>100_bases GGCGGAGGACGGCATGGCGGCAAGGCAGGGACAAAGCACCATTTTAGCGCTCGCGCACGCTCTATAATCCGCGGCGTAGT GCGCCCTCCTCTCTATTGCC
Downstream 100 bases:
>100_bases CGATGGCCAGGGCCACGGCCTCGGCCACTTCGATGCCGTCGATCGCGGCGGAGTAAATGCCGCCTGCATAGCCGGCACCC TCGCCTGCGGGATACAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MPSTDIPSSTPTILPVEAAVIGGGPAGLMAAEVLASRGVRVHVFDAMPSVGRKFLMAGKSGMNLTHAEPEPAFTGRYGER ADVIAPMLADFGAQTLREWVHGLGIETFVGSSGRVFPTDMKAAPMLRAWLHRLRDSGVEFHMRHRWVGWTEDASRALRFA TPQGEQHVQANAVILALGGASWARLGSDGAWVPLLAQHGVDIAALRPANCGFDVAWSAMFSERHAGNPVKPVALAVTDVN GNAHYRQGEFVISAGGIEGSLVYALSAPIRDLIERDGEAVVHLDLLPDRDAQRVLAEVSHPRGSRSLSSHLQSRLGITGV KAGLLRECLSKEAMHDTVTLAAAIKALPLRLLRARPIDEVISSAGGVRFEAMNPHLMLNALPGVFCAGEMLDWEAPTGGY LLTACFASGRTAGQGAADWLISGR
Sequences:
>Translated_424_residues MPSTDIPSSTPTILPVEAAVIGGGPAGLMAAEVLASRGVRVHVFDAMPSVGRKFLMAGKSGMNLTHAEPEPAFTGRYGER ADVIAPMLADFGAQTLREWVHGLGIETFVGSSGRVFPTDMKAAPMLRAWLHRLRDSGVEFHMRHRWVGWTEDASRALRFA TPQGEQHVQANAVILALGGASWARLGSDGAWVPLLAQHGVDIAALRPANCGFDVAWSAMFSERHAGNPVKPVALAVTDVN GNAHYRQGEFVISAGGIEGSLVYALSAPIRDLIERDGEAVVHLDLLPDRDAQRVLAEVSHPRGSRSLSSHLQSRLGITGV KAGLLRECLSKEAMHDTVTLAAAIKALPLRLLRARPIDEVISSAGGVRFEAMNPHLMLNALPGVFCAGEMLDWEAPTGGY LLTACFASGRTAGQGAADWLISGR >Mature_423_residues PSTDIPSSTPTILPVEAAVIGGGPAGLMAAEVLASRGVRVHVFDAMPSVGRKFLMAGKSGMNLTHAEPEPAFTGRYGERA DVIAPMLADFGAQTLREWVHGLGIETFVGSSGRVFPTDMKAAPMLRAWLHRLRDSGVEFHMRHRWVGWTEDASRALRFAT PQGEQHVQANAVILALGGASWARLGSDGAWVPLLAQHGVDIAALRPANCGFDVAWSAMFSERHAGNPVKPVALAVTDVNG NAHYRQGEFVISAGGIEGSLVYALSAPIRDLIERDGEAVVHLDLLPDRDAQRVLAEVSHPRGSRSLSSHLQSRLGITGVK AGLLRECLSKEAMHDTVTLAAAIKALPLRLLRARPIDEVISSAGGVRFEAMNPHLMLNALPGVFCAGEMLDWEAPTGGYL LTACFASGRTAGQGAADWLISGR
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 45127; Mature: 44996
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTDIPSSTPTILPVEAAVIGGGPAGLMAAEVLASRGVRVHVFDAMPSVGRKFLMAGKS CCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCC GMNLTHAEPEPAFTGRYGERADVIAPMLADFGAQTLREWVHGLGIETFVGSSGRVFPTDM CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCCCCCCC KAAPMLRAWLHRLRDSGVEFHMRHRWVGWTEDASRALRFATPQGEQHVQANAVILALGGA CHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHEEECCCCCCCCEEEEEEEEEECCC SWARLGSDGAWVPLLAQHGVDIAALRPANCGFDVAWSAMFSERHAGNPVKPVALAVTDVN HHHHCCCCCCEEHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECC GNAHYRQGEFVISAGGIEGSLVYALSAPIRDLIERDGEAVVHLDLLPDRDAQRVLAEVSH CCCEEECCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCC PRGSRSLSSHLQSRLGITGVKAGLLRECLSKEAMHDTVTLAAAIKALPLRLLRARPIDEV CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ISSAGGVRFEAMNPHLMLNALPGVFCAGEMLDWEAPTGGYLLTACFASGRTAGQGAADWL HHCCCCEEEEECCCEEEEECCCCHHCCCCEECCCCCCCCCEEEEHHHCCCCCCCCCCCCE ISGR ECCC >Mature Secondary Structure PSTDIPSSTPTILPVEAAVIGGGPAGLMAAEVLASRGVRVHVFDAMPSVGRKFLMAGKS CCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCC GMNLTHAEPEPAFTGRYGERADVIAPMLADFGAQTLREWVHGLGIETFVGSSGRVFPTDM CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCCCCCCC KAAPMLRAWLHRLRDSGVEFHMRHRWVGWTEDASRALRFATPQGEQHVQANAVILALGGA CHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHEEECCCCCCCCEEEEEEEEEECCC SWARLGSDGAWVPLLAQHGVDIAALRPANCGFDVAWSAMFSERHAGNPVKPVALAVTDVN HHHHCCCCCCEEHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECC GNAHYRQGEFVISAGGIEGSLVYALSAPIRDLIERDGEAVVHLDLLPDRDAQRVLAEVSH CCCEEECCCEEEEECCCCCEEEEEEHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCC PRGSRSLSSHLQSRLGITGVKAGLLRECLSKEAMHDTVTLAAAIKALPLRLLRARPIDEV CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ISSAGGVRFEAMNPHLMLNALPGVFCAGEMLDWEAPTGGYLLTACFASGRTAGQGAADWL HHCCCCEEEEECCCEEEEECCCCHHCCCCEECCCCCCCCCEEEEHHHCCCCCCCCCCCCE ISGR ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]