Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is gsiD [H]
Identifier: 73541613
GI number: 73541613
Start: 2109799
End: 2110710
Strand: Reverse
Name: gsiD [H]
Synonym: Reut_A1924
Alternate gene names: 73541613
Gene position: 2110710-2109799 (Counterclockwise)
Preceding gene: 73541614
Following gene: 73541612
Centisome position: 55.45
GC content: 66.01
Gene sequence:
>912_bases ATGACCGAGATTTCCACGCCCGCCGACACCCCGGCAGCCACCGTCGCAGCGGCCCCTCAGGCCGTGCGGACGCCCTGGAC CGAGTTCTGGCGCAAATTCCGCAAGCAGCATCTGGCGCTCGGCGCCGGTGGGTTCGTGCTGCTGCTGATCGTGGTGGCAA TCCTGTCGCCGCATCTGGTGCCCTACGATCCCGAGAATTTCTTCGACTATGACGCGCTCAACGCCGGCCCGTCCGCAGCC CACTGGATGGGTGTGGATTCGCTCGGCCGCGACATCTTCAGCCGCATCCTGGCCGGCACGCGCATCTCGCTGGCGGCTGG TTTCCTGTCGGTCATCATCGGCGCCGTGATCGGCACCGCGCTGGGCCTGCTGGCCGGCTACTACGAAGGCTGGTGGGACC GCATCGTGATGCGCATCTCCGACGTGCTGTTCGCGTTCCCGGGCATCCTGCTGGCGATCGGTGTCGTCGCGATCCTCGGC AACGGCATGGTCAACGTAATCTTCGCCGTGGCCATCTTCAGCATTCCGGCGTTTGCGCGGCTGGTTCGCGGCAATACGCT GATGCTCAAGCGCCTGACCTATGTGGAAGCTGCGCGCAGCATCGGAGCGTCGGACTGGACCATCCTGATGCGGCATATCC TGCCCGGCACGGTGTCGTCGATCGTGGTGTACTTCTCGATGCGGATCGGCACGTCGATCATCACCGCGGCGAGCCTCTCG TTCCTCGGGCTCGGCGCACAACCGCCGACGCCGGAGTGGGGTGCCATGCTGAACGAGGCCCGCGCCGACATGGTGACGGC GCCCCACGTCGCAATCTTCCCGAGCCTGGCGATCTTCCTGACGGTGCTGGCCTTCAACCTGCTCGGTGATGGCCTGCGCG ATGCGCTCGATCCGAAGATCGACCGGCGCTGA
Upstream 100 bases:
>100_bases GCTGCTGTTCTCGCTTGAATTCATCCTGATCAACCTGGTGGTGGACTTGCTCTACACCGTGATCAACCCAACCATCCGCT ACAAGTAAAAGGAGGCAGGC
Downstream 100 bases:
>100_bases GGCGAGATGGAGATGGAAGCCCTGACACCGCCGGTCATTGGTGCGCTGCCCGCTGGCGCACGCAACAGCATCACGGACGT GGCCGGCGTGACGGTCGGGC
Product: binding-protein dependent transport system inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTEISTPADTPAATVAAAPQAVRTPWTEFWRKFRKQHLALGAGGFVLLLIVVAILSPHLVPYDPENFFDYDALNAGPSAA HWMGVDSLGRDIFSRILAGTRISLAAGFLSVIIGAVIGTALGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGVVAILG NGMVNVIFAVAIFSIPAFARLVRGNTLMLKRLTYVEAARSIGASDWTILMRHILPGTVSSIVVYFSMRIGTSIITAASLS FLGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKIDRR
Sequences:
>Translated_303_residues MTEISTPADTPAATVAAAPQAVRTPWTEFWRKFRKQHLALGAGGFVLLLIVVAILSPHLVPYDPENFFDYDALNAGPSAA HWMGVDSLGRDIFSRILAGTRISLAAGFLSVIIGAVIGTALGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGVVAILG NGMVNVIFAVAIFSIPAFARLVRGNTLMLKRLTYVEAARSIGASDWTILMRHILPGTVSSIVVYFSMRIGTSIITAASLS FLGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKIDRR >Mature_302_residues TEISTPADTPAATVAAAPQAVRTPWTEFWRKFRKQHLALGAGGFVLLLIVVAILSPHLVPYDPENFFDYDALNAGPSAAH WMGVDSLGRDIFSRILAGTRISLAAGFLSVIIGAVIGTALGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGVVAILGN GMVNVIFAVAIFSIPAFARLVRGNTLMLKRLTYVEAARSIGASDWTILMRHILPGTVSSIVVYFSMRIGTSIITAASLSF LGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKIDRR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=283, Percent_Identity=79.1519434628975, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=43.7007874015748, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1789964, Length=285, Percent_Identity=41.7543859649123, Blast_Score=184, Evalue=8e-48, Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=39.4190871369295, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=36.5248226950355, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1787549, Length=282, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1788505, Length=236, Percent_Identity=31.7796610169492, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32535; Mature: 32403
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISTPADTPAATVAAAPQAVRTPWTEFWRKFRKQHLALGAGGFVLLLIVVAILSPHLV CCCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PYDPENFFDYDALNAGPSAAHWMGVDSLGRDIFSRILAGTRISLAAGFLSVIIGAVIGTA CCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGVVAILGNGMVNVIFAVAIFSIPAFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVRGNTLMLKRLTYVEAARSIGASDWTILMRHILPGTVSSIVVYFSMRIGTSIITAASLS HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKI HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRR CCC >Mature Secondary Structure TEISTPADTPAATVAAAPQAVRTPWTEFWRKFRKQHLALGAGGFVLLLIVVAILSPHLV CCCCCCCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC PYDPENFFDYDALNAGPSAAHWMGVDSLGRDIFSRILAGTRISLAAGFLSVIIGAVIGTA CCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LGLLAGYYEGWWDRIVMRISDVLFAFPGILLAIGVVAILGNGMVNVIFAVAIFSIPAFAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LVRGNTLMLKRLTYVEAARSIGASDWTILMRHILPGTVSSIVVYFSMRIGTSIITAASLS HHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH FLGLGAQPPTPEWGAMLNEARADMVTAPHVAIFPSLAIFLTVLAFNLLGDGLRDALDPKI HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA