| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is citZ [H]
Identifier: 73541449
GI number: 73541449
Start: 1916636
End: 1917760
Strand: Reverse
Name: citZ [H]
Synonym: Reut_A1760
Alternate gene names: 73541449
Gene position: 1917760-1916636 (Counterclockwise)
Preceding gene: 73541454
Following gene: 73541448
Centisome position: 50.38
GC content: 66.22
Gene sequence:
>1125_bases ATGGACGAGGCATGCGCGCGGCTCGGCGTGAGGCCGCAGACGGTCTACGCGTACGTCAGCCGCGGCAAGATCGAGGTCAT GTCCGATCCGGTCGATACGCGTCGCAGCCTGTATCGCGCCGAAGACGTGGCGACGCTGGCCAAACGCAAGCAGGCTGGCC GCAAGCATGAGACGCTGGCCACCAACACGCTGTTTGGCGCCGAGCCCAGCATTCCGACCGCGATCTCAACGTTCCTGCGC GAACGGCTCTACTACCGTGGCCGCGACGCGGTGGTGCTCGCCGAAACCGCCACGCTGGAAGAGGCCGCGCAGTTGCTGTG GGATTCAGCGCAGCCCGTGAATTTTTCGTCGTCCACCAAGGTGGCAAAACCGGGGCGTGTGGCGGCCTTCAAGGCGTTGG CCGAACTGGCTGCCACCGGTCATTCGACACATGGCCGCATGACGCGCGTCCTGCATGCGGAAGGCCAGGGCCTGGTCGGC CAGATGGCCAACGCGTTTGGCGCACAGCCGGGGCAGCAAGCGCTGCATATGCGCTTCGCGCAAGGGTGGGGGCTGAAGCC GGCAGGGGCCGAGTTGCTGAGGATGGCCATGGTGCTGCTGGTCGATCATGAACTGACCAGCTCCGCGTTTGCGTCGCGTA TCGCGGCGTCGAACGGTGCGTCGTTGCCGGCGTGCCTGCTTTCCGGCCTCGCTACCTTGTCCGGGCCGCTGCACGGTGAT GCTTCCGGTCGCGTCAAGGCGCTGTTCAACGACGTCGAACGGCAGGGCGAAGATCAGGTCATCACGCACTACCTGTCGAC AGGACAGGCGCTTGCGGGCTTCGGACACCACCTCTATCCCGAGGGCGACCCACGCGCCGCCGCGCTGCTGTCACGGTTCG AGCCACCGCCGGTCATCGCCCGGTTCATCGCACAGGCAACACGCCTGACCGGCTTGCAGCCCAATATCGACGTGGCATTG GCCGCGCTGGTGATTCACTGCGGCCTGCCCGACGATGCAGCATTCGGGATGTTCGCCACGGCGCGCAGCATCGGACTGCT CGCGCATAGCCTGGAGCAACTGGGTGTGGGACAGGTGATCCGTCCGAGAGGCCGCTATGTCGGCGTGGTGCCGGAACGGG TCTGA
Upstream 100 bases:
>100_bases AGGACCCATGGTAGTTAATAGTTGATTGTCAATGCAATATTGATATATAAAATCAACATAAATAGATGTGGAGCAAATCA CCATGGGTCCCTGGATATCG
Downstream 100 bases:
>100_bases GCTACGCAAGTTTGCTGTGCGTGCTCTTGTACGAATGGGCAGACAGGCATGCGGCCCATTGCACTCTGCTTTATCACAGA TATAAAACACGCTCAGCAGC
Product: citrate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MDEACARLGVRPQTVYAYVSRGKIEVMSDPVDTRRSLYRAEDVATLAKRKQAGRKHETLATNTLFGAEPSIPTAISTFLR ERLYYRGRDAVVLAETATLEEAAQLLWDSAQPVNFSSSTKVAKPGRVAAFKALAELAATGHSTHGRMTRVLHAEGQGLVG QMANAFGAQPGQQALHMRFAQGWGLKPAGAELLRMAMVLLVDHELTSSAFASRIAASNGASLPACLLSGLATLSGPLHGD ASGRVKALFNDVERQGEDQVITHYLSTGQALAGFGHHLYPEGDPRAAALLSRFEPPPVIARFIAQATRLTGLQPNIDVAL AALVIHCGLPDDAAFGMFATARSIGLLAHSLEQLGVGQVIRPRGRYVGVVPERV
Sequences:
>Translated_374_residues MDEACARLGVRPQTVYAYVSRGKIEVMSDPVDTRRSLYRAEDVATLAKRKQAGRKHETLATNTLFGAEPSIPTAISTFLR ERLYYRGRDAVVLAETATLEEAAQLLWDSAQPVNFSSSTKVAKPGRVAAFKALAELAATGHSTHGRMTRVLHAEGQGLVG QMANAFGAQPGQQALHMRFAQGWGLKPAGAELLRMAMVLLVDHELTSSAFASRIAASNGASLPACLLSGLATLSGPLHGD ASGRVKALFNDVERQGEDQVITHYLSTGQALAGFGHHLYPEGDPRAAALLSRFEPPPVIARFIAQATRLTGLQPNIDVAL AALVIHCGLPDDAAFGMFATARSIGLLAHSLEQLGVGQVIRPRGRYVGVVPERV >Mature_374_residues MDEACARLGVRPQTVYAYVSRGKIEVMSDPVDTRRSLYRAEDVATLAKRKQAGRKHETLATNTLFGAEPSIPTAISTFLR ERLYYRGRDAVVLAETATLEEAAQLLWDSAQPVNFSSSTKVAKPGRVAAFKALAELAATGHSTHGRMTRVLHAEGQGLVG QMANAFGAQPGQQALHMRFAQGWGLKPAGAELLRMAMVLLVDHELTSSAFASRIAASNGASLPACLLSGLATLSGPLHGD ASGRVKALFNDVERQGEDQVITHYLSTGQALAGFGHHLYPEGDPRAAALLSRFEPPPVIARFIAQATRLTGLQPNIDVAL AALVIHCGLPDDAAFGMFATARSIGLLAHSLEQLGVGQVIRPRGRYVGVVPERV
Specific function: Catalyzes The Synthesis Of 2-Methylcitrate From Propionyl-CoA And Oxaloacetate. Also Catalyzes The Condensation Of Oxaloacetate With Acetyl-CoA But With A Lower Specificity. [C]
COG id: COG0372
COG function: function code C; Citrate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the citrate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786527, Length=198, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011278 - InterPro: IPR016142 - InterPro: IPR016143 - InterPro: IPR002020 - InterPro: IPR016141 - InterPro: IPR019810 [H]
Pfam domain/function: PF00285 Citrate_synt [H]
EC number: =2.3.3.1 [H]
Molecular weight: Translated: 39887; Mature: 39887
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEACARLGVRPQTVYAYVSRGKIEVMSDPVDTRRSLYRAEDVATLAKRKQAGRKHETLA CCCHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TNTLFGAEPSIPTAISTFLRERLYYRGRDAVVLAETATLEEAAQLLWDSAQPVNFSSSTK HCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC VAKPGRVAAFKALAELAATGHSTHGRMTRVLHAEGQGLVGQMANAFGAQPGQQALHMRFA CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH QGWGLKPAGAELLRMAMVLLVDHELTSSAFASRIAASNGASLPACLLSGLATLSGPLHGD HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC ASGRVKALFNDVERQGEDQVITHYLSTGQALAGFGHHLYPEGDPRAAALLSRFEPPPVIA CCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHH RFIAQATRLTGLQPNIDVALAALVIHCGLPDDAAFGMFATARSIGLLAHSLEQLGVGQVI HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE RPRGRYVGVVPERV CCCCCEEECCCCCC >Mature Secondary Structure MDEACARLGVRPQTVYAYVSRGKIEVMSDPVDTRRSLYRAEDVATLAKRKQAGRKHETLA CCCHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TNTLFGAEPSIPTAISTFLRERLYYRGRDAVVLAETATLEEAAQLLWDSAQPVNFSSSTK HCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCC VAKPGRVAAFKALAELAATGHSTHGRMTRVLHAEGQGLVGQMANAFGAQPGQQALHMRFA CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH QGWGLKPAGAELLRMAMVLLVDHELTSSAFASRIAASNGASLPACLLSGLATLSGPLHGD HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC ASGRVKALFNDVERQGEDQVITHYLSTGQALAGFGHHLYPEGDPRAAALLSRFEPPPVIA CCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHH RFIAQATRLTGLQPNIDVALAALVIHCGLPDDAAFGMFATARSIGLLAHSLEQLGVGQVI HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE RPRGRYVGVVPERV CCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9006016; 12397186 [H]