| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is cusC [H]
Identifier: 73541429
GI number: 73541429
Start: 1881118
End: 1882671
Strand: Reverse
Name: cusC [H]
Synonym: Reut_A1740
Alternate gene names: 73541429
Gene position: 1882671-1881118 (Counterclockwise)
Preceding gene: 73541430
Following gene: 73541428
Centisome position: 49.46
GC content: 66.67
Gene sequence:
>1554_bases ATGCCGCTCCCGGCCCGTTCGCCCCTCCGGCTGATGATGGCGGCCTTGCTGCTCGGCGGCTGTACCCAGCTTGGCCCCGA CTTCCAGGCGCAACGCGAGCCGTGGACCGAATCCTGGAGCAGCCCCTCACTCGAACAAGCCACTGAGCAACGGGAGCAGC CCGACCTGCGCCAGTGGTGGCGGGTGTTCGACGACCCCATCCTGGAAAAACTGATTGCCGAGGCCGACGCCAATAACGCC GGCGTCAGGATCGCGGGCCTGCGCGTGGTGGAGGCCCGGGCCCAGCTTGGCATTGCGCAGGCCGGGCGCTATCCGCAGGT CCAGCAAGCGAGTGGCGAGGCGCTTTACGTCCATAGCCGGCAGTCCGGCGCCACGGTGCAGACCAGCCGCGTCTGGCAGT TCAGCGCCGGTTTCGACGTTGGCTGGGAGCTGGATTTCTGGGGGCGCTTCAGCCGCGCGATCGAATCGGCGGATGCGGCA TATTTTGCTTCCCAGGCCAACTATCAGGACGTACTGGTTCTGCTGCATGCGCAACTGGCCCAGACCTATTTCACTTTGCG CACGGCCGAAGCACGGTTACGCATCGCACGCGAGAACGCGCGGCTGCAGAAGCGCAGCTATGAAATCACCGAACGCCTGT TCAAGGGAGGCGAGAGCGACGAGCTCGATCTGCAGCAGGCCAAGACCCAATACCTCGGCACGCTGAGCAGCATTCCCGAA CTGGAGGGCCAGATCCTGCATGCACGCAATGCGCTGGCCATCCTGATCGGGCGCCCGCCGGCTCCCATGCACGAACTGCT GGACATGCCCGACAAGGAGGGTGTGGTGCCACTGATCGACCGGGCGGTGCTGCGGGACGTCCCGGCCAGCCTGCTGCTGC GCCGCCCGGACATCCGCGCTGCCGAACTGCAGATGGCTGCGCAGTCGGCGCTGATCGGCGTGGCCAAGGCCGAGCTTTAT CCGTCGCTGACGCTGCTCGGCAGCATTGGCTGGTCGGCCAGCTCGTTGCCCGCCACGCCTAACGGGCTGGTGCTGATCGC CGGGCCCAGCCTGCGCTGGAATGTGTTCGACTACGGGCGCATCCGCAACAACGTGCGCATCCAGGATGCGCGCCTGCAGC AGCTGATCGTTTCCTACCAGGACTCCGTGCGCCAGGCCGCGCGCGAGGCCGACGATGCCGCCAGCGGCCTGATCAAGGCG CTGGAACGCGAAGCGATCCTGGCGCAGGCATCGCAGTCCGCGAACCGTTCGCTGGCGCTGGCCACTGCGCTGTTCCGCGA GGGGTACTCGGACTTCCAGCGCGTGCTGGACGCCCAGCGCGCGCTGTTTGCCCAGCAGGACGCTTACCTGGTCAACCGCA GCACGGCAGTCGCGGATCTGATCGCACTGTACAAGGCGCTCGGCGGTGGCTGGGACACGGCGCAGCCGCTCGTCGATACC GCGACACGGCAGCAGATGGAGCAACGTACCGACTGGGGCGGCCTGCTCGACGAGACGGTGAACGCTACAACCGGCAAACG CTCTTCCTTGCAGCGAGGCACACCCAATGAGTGA
Upstream 100 bases:
>100_bases TATGCCGCAGGTTCCCACCATGGGAATGACGATCCGCCTAAGGCTACCCGGCATGCGCGCCCGGCGCTGGCCTGTTCTTT GCCGTGGCCGGTAGCTGACC
Downstream 100 bases:
>100_bases CGACGCGCCACCCGCCCCGGTATCTCCGCCCCCGGCGCCCGCGCCATCGCCAACGCCATCTCCCTCGGCAGATCCGGCCG GAAAGGGCGTAAAGGTGGTG
Product: RND efflux system, outer membrane lipoprotein, NodT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 516
Protein sequence:
>517_residues MPLPARSPLRLMMAALLLGGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWWRVFDDPILEKLIAEADANNA GVRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSRQSGATVQTSRVWQFSAGFDVGWELDFWGRFSRAIESADAA YFASQANYQDVLVLLHAQLAQTYFTLRTAEARLRIARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPE LEGQILHARNALAILIGRPPAPMHELLDMPDKEGVVPLIDRAVLRDVPASLLLRRPDIRAAELQMAAQSALIGVAKAELY PSLTLLGSIGWSASSLPATPNGLVLIAGPSLRWNVFDYGRIRNNVRIQDARLQQLIVSYQDSVRQAAREADDAASGLIKA LEREAILAQASQSANRSLALATALFREGYSDFQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWDTAQPLVDT ATRQQMEQRTDWGGLLDETVNATTGKRSSLQRGTPNE
Sequences:
>Translated_517_residues MPLPARSPLRLMMAALLLGGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWWRVFDDPILEKLIAEADANNA GVRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSRQSGATVQTSRVWQFSAGFDVGWELDFWGRFSRAIESADAA YFASQANYQDVLVLLHAQLAQTYFTLRTAEARLRIARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPE LEGQILHARNALAILIGRPPAPMHELLDMPDKEGVVPLIDRAVLRDVPASLLLRRPDIRAAELQMAAQSALIGVAKAELY PSLTLLGSIGWSASSLPATPNGLVLIAGPSLRWNVFDYGRIRNNVRIQDARLQQLIVSYQDSVRQAAREADDAASGLIKA LEREAILAQASQSANRSLALATALFREGYSDFQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWDTAQPLVDT ATRQQMEQRTDWGGLLDETVNATTGKRSSLQRGTPNE >Mature_516_residues PLPARSPLRLMMAALLLGGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWWRVFDDPILEKLIAEADANNAG VRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSRQSGATVQTSRVWQFSAGFDVGWELDFWGRFSRAIESADAAY FASQANYQDVLVLLHAQLAQTYFTLRTAEARLRIARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPEL EGQILHARNALAILIGRPPAPMHELLDMPDKEGVVPLIDRAVLRDVPASLLLRRPDIRAAELQMAAQSALIGVAKAELYP SLTLLGSIGWSASSLPATPNGLVLIAGPSLRWNVFDYGRIRNNVRIQDARLQQLIVSYQDSVRQAAREADDAASGLIKAL EREAILAQASQSANRSLALATALFREGYSDFQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWDTAQPLVDTA TRQQMEQRTDWGGLLDETVNATTGKRSSLQRGTPNE
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI1786785, Length=484, Percent_Identity=33.2644628099174, Blast_Score=193, Evalue=2e-50, Organism=Escherichia coli, GI2367348, Length=442, Percent_Identity=25.7918552036199, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 57072; Mature: 56941
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPARSPLRLMMAALLLGGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWW CCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH RVFDDPILEKLIAEADANNAGVRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSR HHHCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEC QSGATVQTSRVWQFSAGFDVGWELDFWGRFSRAIESADAAYFASQANYQDVLVLLHAQLA CCCCEEEECEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QTYFTLRTAEARLRIARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH LEGQILHARNALAILIGRPPAPMHELLDMPDKEGVVPLIDRAVLRDVPASLLLRRPDIRA HCCHHEECCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCH AELQMAAQSALIGVAKAELYPSLTLLGSIGWSASSLPATPNGLVLIAGPSLRWNVFDYGR HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECEEHHH IRNNVRIQDARLQQLIVSYQDSVRQAAREADDAASGLIKALEREAILAQASQSANRSLAL HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ATALFREGYSDFQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWDTAQPLVDT HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH ATRQQMEQRTDWGGLLDETVNATTGKRSSLQRGTPNE HHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCCCCCC >Mature Secondary Structure PLPARSPLRLMMAALLLGGCTQLGPDFQAQREPWTESWSSPSLEQATEQREQPDLRQWW CCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH RVFDDPILEKLIAEADANNAGVRIAGLRVVEARAQLGIAQAGRYPQVQQASGEALYVHSR HHHCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEEC QSGATVQTSRVWQFSAGFDVGWELDFWGRFSRAIESADAAYFASQANYQDVLVLLHAQLA CCCCEEEECEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QTYFTLRTAEARLRIARENARLQKRSYEITERLFKGGESDELDLQQAKTQYLGTLSSIPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCH LEGQILHARNALAILIGRPPAPMHELLDMPDKEGVVPLIDRAVLRDVPASLLLRRPDIRA HCCHHEECCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCH AELQMAAQSALIGVAKAELYPSLTLLGSIGWSASSLPATPNGLVLIAGPSLRWNVFDYGR HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEECEEHHH IRNNVRIQDARLQQLIVSYQDSVRQAAREADDAASGLIKALEREAILAQASQSANRSLAL HCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ATALFREGYSDFQRVLDAQRALFAQQDAYLVNRSTAVADLIALYKALGGGWDTAQPLVDT HHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHH ATRQQMEQRTDWGGLLDETVNATTGKRSSLQRGTPNE HHHHHHHHHCCCCCHHHHHHCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]