Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

Click here to switch to the map view.

The map label for this gene is 73541422

Identifier: 73541422

GI number: 73541422

Start: 1872929

End: 1873477

Strand: Reverse

Name: 73541422

Synonym: Reut_A1733

Alternate gene names: NA

Gene position: 1873477-1872929 (Counterclockwise)

Preceding gene: 73541424

Following gene: 73541421

Centisome position: 49.22

GC content: 64.85

Gene sequence:

>549_bases
ATGTCCAATAGCCTGCAGAAGTGGGTCGGGCGCAATCGCCCGCCCCGTGTCCAGATCTCGTACGACGTCGAAGTGGGTGA
CGCCATCGAGAAGCGTGAATTGCCCATGGTGGTCGGCCTTCTGGCGGACCTGTCGGGCCATCCCGCCGAGCCGCTGCCCA
AGCTGAAGGAGCGCCGCTTCGTCGAGATCGACCGCGACAACTTCGACGAGATCATGGGCAAGATCGCGCCGCGCCTGGAG
CTGTCGGTTCCCGACACCATGAAGGACGGCCAGTCCAACCTGAAGGTCGAACTGAACTTCGAGAAATTCAGCGACTTCCA
TCCGGAAAGCCTGGTGGGTCAGATTCCGCGCCTGGCCAAGCTGCTCGAGGCGCGCCAGCAACTGCGCGACCTGCTGGGCA
AGCTCGACGGCAACGACGAGCTCGACTCGCTGCTCGAGCGCATCGTGCGCGATGCCGATGAGCTGAAGAAGGTGCGCAGC
GAAGCCGACGCCGGCCAGCCGGCCGCAGCGGACGAGCAAGCCGCAGAAACGCCGGCCGACGCCAGCTAA

Upstream 100 bases:

>100_bases
GACGATGATTTCGTCTACGCCGGGGGGCTTTGCCATGCGCACGATATTTGTGCGAATTCGATGATTGTTCGGACGCATTC
AAGTCCTTCCGGAGAGTTCC

Downstream 100 bases:

>100_bases
GTCCGAAGCATAGGAAGCAACGAATTCCCTGAGGGTGATCCAGATGGCAAGCAATCCTATCGCCGAAGCGGCGACCGAAT
CGAAGGCGGCCGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Cytoplasmic Protein; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSNSLQKWVGRNRPPRVQISYDVEVGDAIEKRELPMVVGLLADLSGHPAEPLPKLKERRFVEIDRDNFDEIMGKIAPRLE
LSVPDTMKDGQSNLKVELNFEKFSDFHPESLVGQIPRLAKLLEARQQLRDLLGKLDGNDELDSLLERIVRDADELKKVRS
EADAGQPAAADEQAAETPADAS

Sequences:

>Translated_182_residues
MSNSLQKWVGRNRPPRVQISYDVEVGDAIEKRELPMVVGLLADLSGHPAEPLPKLKERRFVEIDRDNFDEIMGKIAPRLE
LSVPDTMKDGQSNLKVELNFEKFSDFHPESLVGQIPRLAKLLEARQQLRDLLGKLDGNDELDSLLERIVRDADELKKVRS
EADAGQPAAADEQAAETPADAS
>Mature_181_residues
SNSLQKWVGRNRPPRVQISYDVEVGDAIEKRELPMVVGLLADLSGHPAEPLPKLKERRFVEIDRDNFDEIMGKIAPRLEL
SVPDTMKDGQSNLKVELNFEKFSDFHPESLVGQIPRLAKLLEARQQLRDLLGKLDGNDELDSLLERIVRDADELKKVRSE
ADAGQPAAADEQAAETPADAS

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20350; Mature: 20219

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLQKWVGRNRPPRVQISYDVEVGDAIEKRELPMVVGLLADLSGHPAEPLPKLKERRF
CCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCE
VEIDRDNFDEIMGKIAPRLELSVPDTMKDGQSNLKVELNFEKFSDFHPESLVGQIPRLAK
EECCCCCHHHHHHHHCCCEECCCCCHHHCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHH
LLEARQQLRDLLGKLDGNDELDSLLERIVRDADELKKVRSEADAGQPAAADEQAAETPAD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
AS
CC
>Mature Secondary Structure 
SNSLQKWVGRNRPPRVQISYDVEVGDAIEKRELPMVVGLLADLSGHPAEPLPKLKERRF
CCCHHHHHCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHCCE
VEIDRDNFDEIMGKIAPRLELSVPDTMKDGQSNLKVELNFEKFSDFHPESLVGQIPRLAK
EECCCCCHHHHHHHHCCCEECCCCCHHHCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHH
LLEARQQLRDLLGKLDGNDELDSLLERIVRDADELKKVRSEADAGQPAAADEQAAETPAD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA