| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541418
Identifier: 73541418
GI number: 73541418
Start: 1868540
End: 1870300
Strand: Reverse
Name: 73541418
Synonym: Reut_A1729
Alternate gene names: NA
Gene position: 1870300-1868540 (Counterclockwise)
Preceding gene: 73541419
Following gene: 73541417
Centisome position: 49.13
GC content: 67.23
Gene sequence:
>1761_bases ATGGCTGAGCTGGGCGAAGGCGACATCCTGCACTACTACAAGCGGGAGCTGTCCTATCTGCGTACGCAGGGCGCGGCTTT CGCCGAACGCTATCCCATGGTGGCGTCGCGCCTGGCGCTGCACGGCACCGAATCGCTTGACCCGCATACCGAACGCCTGA TCGAGGCGACGGCCTTCCTGGCCGCACGTGTGCACCGCGATCTCGACCAGTCCTTTCCGCAGGTCGCTTCGTCGCTGCTG GAGAATGTCTGCCCGGCGCTGGTGCAACCGCTGCCCTCGATGACCGTGGTGCAGTTCGCGCTCGACCCGAGCCAGGGCAA GGTCACCGCAGGCTACCGGGTACCTCGCCATACCGGACTGCAGGCCCGTACCGAGGACGATCAGACCTGCCGCTTCCGCA CCAGCTGGGAAACGACGCTGTGGCCGCTGACGGTCGAGCAGGCCCAGTTCGACCAGGACCATACCCTGCGCCTGACGCTT GCCTGTGCCGACGGTGTCGACTTCTCGGAGCTGGAACTCACCACGCTGCGCCTGCACCTGCACGGCGACTGGATGGTGAC GATGCCGCTTTACGAACTGCTGGTGAGCGGGGTGGCCGGCGTGCGCATCGAGCCGAGCGACGGCGAGGCCTCGCTGCTGC CGGCTTCGGCCTGGCGCGAGGTCGGCTACGATGCCGACGAGGCCGTGCTGCCGCAGCCGCCCAATGCGCAACCGGCTTAT GGGTTGATGCAGGAGTACTTCGCCTTTCCGCGCAAGTTCCACTTCTTCGATCTGGCGTTGCCCGCGGGCCGGCTTGGGCG CGGCACGCGCTGCGATATCGTGCTGCGTCTGGCGCGAGTGTCGCGCGGCATGGCGCGCATTGGCGCCGGCAATTTCCGCC TGGGCTGCGTGCCGGCCATCAACTTGTTCTCGCAGACCAGTGAGCCGATCGTGCTCGACCAGCGTCACTACGAGTACCGG CTGGTGGCGGACCAGCGGCGCGAGGCCGCCACCGAGATCCATTCGGTCAGCTCGGTGGTGCTGTCCGATCCGGCCAGCGA TCGAACCCAGGCTGTGCCACCAGTTGCCGCGGCCAGCGGCGACGCGGGTGCCGACGGCGTGTACTGGTGGACCCGCCGCG AGCCGACCCTTCGGCCCGGCCTGTCCGGCACCGACACCTACCTGACCTTTGTCGATGCGGGCAAGACAAGCAGCCAGCCG GCAGCGCCAGTCGCCTATGCCAACGTGCTTTGCACCAACCGGCGCCTGGCCGAGCAGGTCCCGGTGGGCGCGCGCATGCT GGTGGAAAACGTTTCGCAGAACGCGCGCGTGCGTTTGCTGTACGAGCCGACGGTTCAGCGCAATCCGCCGCTGGGCGGCG AATCGCTGTGGCGGCTTGTGTCGTTGCTGACGCTGCATCACGGCACGCTGGCAAGCGGTGCCACCGGTCGCCACGAGGTG CAGCAGATGCTGCGCCTGTTCGCCGCCGACGGCAGCCGCGAATTGGAACAGATCCGTGGCATACGCAGCGTGCAATCGCG CGGTGTCACCGCACATATCGGCGGGGATGCCTGGCGCGGCTTCTGCCGTGGCACCGAGATCGCCATCGAGTTCGATGCCG ACGCCTTTGCAGGGGGATCGCCGCTGTTGATGGGCGCCGTGCTGGCGCGCTTCTTTGCGTTGTACACCTCGGTCAATTCC TTTGTGCGGCTGGTGGTGCGCCGCGGAGACGAGATATGGAAGCAATGGGAGCCGATGACCGGCTGCCAGACGCTGCTGTG A
Upstream 100 bases:
>100_bases CTGCTGATCGACGGTGAGCTTTGTCTTGGCCAGGCGCCCGAGCGGGTTTCGTTCGAACTGGCCGCAGGCGACGAGACGGC CCAACTGCGCGGGGCCGATC
Downstream 100 bases:
>100_bases TCGACCGTCTCGCCGCCAACCCCGCCGCGTTCAACCTGTTCCAGGCCATCGGCCTGCTGGAACGGGCCACGCCCGGTGCG CATCCGCTCGGCCACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MAELGEGDILHYYKRELSYLRTQGAAFAERYPMVASRLALHGTESLDPHTERLIEATAFLAARVHRDLDQSFPQVASSLL ENVCPALVQPLPSMTVVQFALDPSQGKVTAGYRVPRHTGLQARTEDDQTCRFRTSWETTLWPLTVEQAQFDQDHTLRLTL ACADGVDFSELELTTLRLHLHGDWMVTMPLYELLVSGVAGVRIEPSDGEASLLPASAWREVGYDADEAVLPQPPNAQPAY GLMQEYFAFPRKFHFFDLALPAGRLGRGTRCDIVLRLARVSRGMARIGAGNFRLGCVPAINLFSQTSEPIVLDQRHYEYR LVADQRREAATEIHSVSSVVLSDPASDRTQAVPPVAAASGDAGADGVYWWTRREPTLRPGLSGTDTYLTFVDAGKTSSQP AAPVAYANVLCTNRRLAEQVPVGARMLVENVSQNARVRLLYEPTVQRNPPLGGESLWRLVSLLTLHHGTLASGATGRHEV QQMLRLFAADGSRELEQIRGIRSVQSRGVTAHIGGDAWRGFCRGTEIAIEFDADAFAGGSPLLMGAVLARFFALYTSVNS FVRLVVRRGDEIWKQWEPMTGCQTLL
Sequences:
>Translated_586_residues MAELGEGDILHYYKRELSYLRTQGAAFAERYPMVASRLALHGTESLDPHTERLIEATAFLAARVHRDLDQSFPQVASSLL ENVCPALVQPLPSMTVVQFALDPSQGKVTAGYRVPRHTGLQARTEDDQTCRFRTSWETTLWPLTVEQAQFDQDHTLRLTL ACADGVDFSELELTTLRLHLHGDWMVTMPLYELLVSGVAGVRIEPSDGEASLLPASAWREVGYDADEAVLPQPPNAQPAY GLMQEYFAFPRKFHFFDLALPAGRLGRGTRCDIVLRLARVSRGMARIGAGNFRLGCVPAINLFSQTSEPIVLDQRHYEYR LVADQRREAATEIHSVSSVVLSDPASDRTQAVPPVAAASGDAGADGVYWWTRREPTLRPGLSGTDTYLTFVDAGKTSSQP AAPVAYANVLCTNRRLAEQVPVGARMLVENVSQNARVRLLYEPTVQRNPPLGGESLWRLVSLLTLHHGTLASGATGRHEV QQMLRLFAADGSRELEQIRGIRSVQSRGVTAHIGGDAWRGFCRGTEIAIEFDADAFAGGSPLLMGAVLARFFALYTSVNS FVRLVVRRGDEIWKQWEPMTGCQTLL >Mature_585_residues AELGEGDILHYYKRELSYLRTQGAAFAERYPMVASRLALHGTESLDPHTERLIEATAFLAARVHRDLDQSFPQVASSLLE NVCPALVQPLPSMTVVQFALDPSQGKVTAGYRVPRHTGLQARTEDDQTCRFRTSWETTLWPLTVEQAQFDQDHTLRLTLA CADGVDFSELELTTLRLHLHGDWMVTMPLYELLVSGVAGVRIEPSDGEASLLPASAWREVGYDADEAVLPQPPNAQPAYG LMQEYFAFPRKFHFFDLALPAGRLGRGTRCDIVLRLARVSRGMARIGAGNFRLGCVPAINLFSQTSEPIVLDQRHYEYRL VADQRREAATEIHSVSSVVLSDPASDRTQAVPPVAAASGDAGADGVYWWTRREPTLRPGLSGTDTYLTFVDAGKTSSQPA APVAYANVLCTNRRLAEQVPVGARMLVENVSQNARVRLLYEPTVQRNPPLGGESLWRLVSLLTLHHGTLASGATGRHEVQ QMLRLFAADGSRELEQIRGIRSVQSRGVTAHIGGDAWRGFCRGTEIAIEFDADAFAGGSPLLMGAVLARFFALYTSVNSF VRLVVRRGDEIWKQWEPMTGCQTLL
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64655; Mature: 64524
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELGEGDILHYYKRELSYLRTQGAAFAERYPMVASRLALHGTESLDPHTERLIEATAFL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AARVHRDLDQSFPQVASSLLENVCPALVQPLPSMTVVQFALDPSQGKVTAGYRVPRHTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECEECCCCCCC QARTEDDQTCRFRTSWETTLWPLTVEQAQFDQDHTLRLTLACADGVDFSELELTTLRLHL CCCCCCCCCEEEEECCCCEEEEEEEHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEEEEE HGDWMVTMPLYELLVSGVAGVRIEPSDGEASLLPASAWREVGYDADEAVLPQPPNAQPAY ECCEEEHHHHHHHHHCCCCCEEEECCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCHH GLMQEYFAFPRKFHFFDLALPAGRLGRGTRCDIVLRLARVSRGMARIGAGNFRLGCVPAI HHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEECHHHH NLFSQTSEPIVLDQRHYEYRLVADQRREAATEIHSVSSVVLSDPASDRTQAVPPVAAASG HHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC DAGADGVYWWTRREPTLRPGLSGTDTYLTFVDAGKTSSQPAAPVAYANVLCTNRRLAEQV CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHC PVGARMLVENVSQNARVRLLYEPTVQRNPPLGGESLWRLVSLLTLHHGTLASGATGRHEV CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH QQMLRLFAADGSRELEQIRGIRSVQSRGVTAHIGGDAWRGFCRGTEIAIEFDADAFAGGS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCC PLLMGAVLARFFALYTSVNSFVRLVVRRGDEIWKQWEPMTGCQTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCC >Mature Secondary Structure AELGEGDILHYYKRELSYLRTQGAAFAERYPMVASRLALHGTESLDPHTERLIEATAFL CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AARVHRDLDQSFPQVASSLLENVCPALVQPLPSMTVVQFALDPSQGKVTAGYRVPRHTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECEECCCCCCC QARTEDDQTCRFRTSWETTLWPLTVEQAQFDQDHTLRLTLACADGVDFSELELTTLRLHL CCCCCCCCCEEEEECCCCEEEEEEEHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEEEEE HGDWMVTMPLYELLVSGVAGVRIEPSDGEASLLPASAWREVGYDADEAVLPQPPNAQPAY ECCEEEHHHHHHHHHCCCCCEEEECCCCCCEECCHHHHHHCCCCCCCCCCCCCCCCCCHH GLMQEYFAFPRKFHFFDLALPAGRLGRGTRCDIVLRLARVSRGMARIGAGNFRLGCVPAI HHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEECHHHH NLFSQTSEPIVLDQRHYEYRLVADQRREAATEIHSVSSVVLSDPASDRTQAVPPVAAASG HHHHCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCC DAGADGVYWWTRREPTLRPGLSGTDTYLTFVDAGKTSSQPAAPVAYANVLCTNRRLAEQV CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHC PVGARMLVENVSQNARVRLLYEPTVQRNPPLGGESLWRLVSLLTLHHGTLASGATGRHEV CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH QQMLRLFAADGSRELEQIRGIRSVQSRGVTAHIGGDAWRGFCRGTEIAIEFDADAFAGGS HHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCCC PLLMGAVLARFFALYTSVNSFVRLVVRRGDEIWKQWEPMTGCQTLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA