| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73541415
Identifier: 73541415
GI number: 73541415
Start: 1862870
End: 1864798
Strand: Reverse
Name: 73541415
Synonym: Reut_A1726
Alternate gene names: NA
Gene position: 1864798-1862870 (Counterclockwise)
Preceding gene: 73541416
Following gene: 73541414
Centisome position: 48.99
GC content: 67.55
Gene sequence:
>1929_bases ATGATTCCGGCCACCGCCACCCAGTCCGACAGCTTCGCCACGGTCACCACGCCGTTTGGCGACGATGTGCTGCTGCTCGA CGGATTTGCCGGGCGCGAGGCGCTTTCCGAGCTGTTTTCCTTCCAGCTGCGCATGCGCTCGGCGGACAAGGCGCTCGATG CCAGCCGCATCGTTGGCCAGAAGGTCACGGTCAGGCTCCAGCGGCCGGGCGGCTTCCTGCGTTGTTTCAACGGCATCGTG ACGCGCTTCGCCCATACCGGCGCCGACCCCAGCCACGCGTTCTACAGCGCCGAGCTGGCGCCGCGCCTGTGGCTGCTGAC GCTGGCGCGCGACCGCAGGATCTTCCAGAACCAGAGCGCGCTCGACATCATCCGCACCGTGCTGGGCGAGTTCGAGGTGG CATTCGACGCGCGCGTCACCGCTTCGCGCTACCCGGTGCGCGAGTACTGCGTGCAGTACGACGAAAGCCCCCTGCAGTTC ATCTCGCGGCTGATGGAGGAAGAGGGCATCTTCTACTACTTCACCTTTTCCGACGGCGCGCACACCATGGTGCTGGGTGA CAGTCCCTCGGCCCACGCCGCGCTGGCCCACGAGGCCGAGCTGTGGGGCGGCCAGCCGGGCGAGCAGGCGGCGGGCCTGC CGATGCTGGCGGCCTTCCGCATGGAACAGGGACTCGGTCCGGCCAACCACGTGCTGGTCGACTATGACTATGTGCAGGCG CAGACCAGCCAGGGCAGTGCGCAGCCGGACTCGAGCGCGCCCGGCGCGCGCCAGTACATTTTCCCGGGGCGCCACAAGGA TGCCTCGGATGCCGCGCGCAAGGCGGCGGTGCGAGTGGCCGCACAGCAGGTCGAGGCTCGCTCCGGCAGCGGCGAGAGCA ACTGTCACGGCCTTGCCGCAGGGAGTACCTTCACCCTCAACGGCCACGTCAATGCGGCACTGAACGCCGAGTACGTGGTG CGCGCGGTCGAGCACTCGGTGGCCGGCAGCCACTATGCCAACAGCTTCACGGTGTTTCCGCTGGCGGTGCCATTCCGCGC GCCGCTGGTAACGCCGCGTCCGCTGGTGGCCGGCACCCATACCGCAACCGTGGTCGGCTCCCAGGGCGAGGAAATCTGGA CGGACCAGCACGGCCGTATCAAGCTCAAGTTCCACTGGGACCAGGCGCCCGGCGCCGACCAGGACAGCTCGTGCTGGGTC CGGGTGGCGCAGGGCATGGCTGGCCAGGGCTGGGGCCATCTGTTCCTGCCACGCGTGGGGCAGGAGGTGGTAGTCAGCTA TGTCGACGGCGATCCCGACCGGCCGCTGGTGACCGGCAGCGTCTACAACGGCCAGGTGACGCCGCCGGTGACGCTTCCCT CGATGCAGACCCAGAGCGTGATCCGCTCGCGCACTTCCAAGAACGGCAGCGCCGGCAACGAGCTGCGCATGGAGGACAAG GCCGGCGCCGAAGAGCTCTACCTGCACGCGCAGCGCGACATGAACGTGGCGGTGGAAAACAAGCTGTCCACCACCGTGGT CGGCGCTGGCGAGTCGCATGTTGTCCAGAAGGGTGACCGGCTGGTCGAGGTGCAGTCGGGCAACGAAACTCACAAGGTGA GCGGCACCCGTAGCCTCGAGGTGACCGGTGACGAGACCCGCACCAACGGCGCCGCCTTCACCCAGGAGGTCAGCGGGGCC TACAAGCTCAAGGTGTCTGGCGATCTGGTCATCGACGTGACGGGCGCCATCACCATCAAGTCGGCAGGCTCGGTGGCGAT TGAGGCTGGCACTTCGCTGAGCAACAAGGCGGGCACCACGCTGGCAAACAAGGCAGGCACTACGCTGAGTGGCGAGGGCC TGACCGTGCAGCAGAAGGCGTCGGCCTCGCACACGGTGGAAAGCGGCGGCATGCTGGAGCTCAAGGGCGCCATGGTGAAA CTGAACTGA
Upstream 100 bases:
>100_bases CGCATGTCGATCGCCGAGCCGTTCGGCGGTGTGCATCTCTCGCTTGACGCGCAGGGCGGCCTGGCCTTCCGTTTCCTGCC GCCTGCGGAGGCCTGAGGCA
Downstream 100 bases:
>100_bases AGCCGCCGATGCACGCCACCGCCCCCCTGGACATTGCCGCCAACGCGAGCACCGCCCCCGCCGACACGCAAGTCGTCGAG GAGCGCGATGCCGCGGGCCA
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; VgrG-Like Protein; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MIPATATQSDSFATVTTPFGDDVLLLDGFAGREALSELFSFQLRMRSADKALDASRIVGQKVTVRLQRPGGFLRCFNGIV TRFAHTGADPSHAFYSAELAPRLWLLTLARDRRIFQNQSALDIIRTVLGEFEVAFDARVTASRYPVREYCVQYDESPLQF ISRLMEEEGIFYYFTFSDGAHTMVLGDSPSAHAALAHEAELWGGQPGEQAAGLPMLAAFRMEQGLGPANHVLVDYDYVQA QTSQGSAQPDSSAPGARQYIFPGRHKDASDAARKAAVRVAAQQVEARSGSGESNCHGLAAGSTFTLNGHVNAALNAEYVV RAVEHSVAGSHYANSFTVFPLAVPFRAPLVTPRPLVAGTHTATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWV RVAQGMAGQGWGHLFLPRVGQEVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTSKNGSAGNELRMEDK AGAEELYLHAQRDMNVAVENKLSTTVVGAGESHVVQKGDRLVEVQSGNETHKVSGTRSLEVTGDETRTNGAAFTQEVSGA YKLKVSGDLVIDVTGAITIKSAGSVAIEAGTSLSNKAGTTLANKAGTTLSGEGLTVQQKASASHTVESGGMLELKGAMVK LN
Sequences:
>Translated_642_residues MIPATATQSDSFATVTTPFGDDVLLLDGFAGREALSELFSFQLRMRSADKALDASRIVGQKVTVRLQRPGGFLRCFNGIV TRFAHTGADPSHAFYSAELAPRLWLLTLARDRRIFQNQSALDIIRTVLGEFEVAFDARVTASRYPVREYCVQYDESPLQF ISRLMEEEGIFYYFTFSDGAHTMVLGDSPSAHAALAHEAELWGGQPGEQAAGLPMLAAFRMEQGLGPANHVLVDYDYVQA QTSQGSAQPDSSAPGARQYIFPGRHKDASDAARKAAVRVAAQQVEARSGSGESNCHGLAAGSTFTLNGHVNAALNAEYVV RAVEHSVAGSHYANSFTVFPLAVPFRAPLVTPRPLVAGTHTATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWV RVAQGMAGQGWGHLFLPRVGQEVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTSKNGSAGNELRMEDK AGAEELYLHAQRDMNVAVENKLSTTVVGAGESHVVQKGDRLVEVQSGNETHKVSGTRSLEVTGDETRTNGAAFTQEVSGA YKLKVSGDLVIDVTGAITIKSAGSVAIEAGTSLSNKAGTTLANKAGTTLSGEGLTVQQKASASHTVESGGMLELKGAMVK LN >Mature_642_residues MIPATATQSDSFATVTTPFGDDVLLLDGFAGREALSELFSFQLRMRSADKALDASRIVGQKVTVRLQRPGGFLRCFNGIV TRFAHTGADPSHAFYSAELAPRLWLLTLARDRRIFQNQSALDIIRTVLGEFEVAFDARVTASRYPVREYCVQYDESPLQF ISRLMEEEGIFYYFTFSDGAHTMVLGDSPSAHAALAHEAELWGGQPGEQAAGLPMLAAFRMEQGLGPANHVLVDYDYVQA QTSQGSAQPDSSAPGARQYIFPGRHKDASDAARKAAVRVAAQQVEARSGSGESNCHGLAAGSTFTLNGHVNAALNAEYVV RAVEHSVAGSHYANSFTVFPLAVPFRAPLVTPRPLVAGTHTATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWV RVAQGMAGQGWGHLFLPRVGQEVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTSKNGSAGNELRMEDK AGAEELYLHAQRDMNVAVENKLSTTVVGAGESHVVQKGDRLVEVQSGNETHKVSGTRSLEVTGDETRTNGAAFTQEVSGA YKLKVSGDLVIDVTGAITIKSAGSVAIEAGTSLSNKAGTTLANKAGTTLSGEGLTVQQKASASHTVESGGMLELKGAMVK LN
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68567; Mature: 68567
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPATATQSDSFATVTTPFGDDVLLLDGFAGREALSELFSFQLRMRSADKALDASRIVGQ CCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVTVRLQRPGGFLRCFNGIVTRFAHTGADPSHAFYSAELAPRLWLLTLARDRRIFQNQSA EEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHEEEHHHCCCEEEEEHHHHHHHHCCCHH LDIIRTVLGEFEVAFDARVTASRYPVREYCVQYDESPLQFISRLMEEEGIFYYFTFSDGA HHHHHHHHHCEEEEEECEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCC HTMVLGDSPSAHAALAHEAELWGGQPGEQAAGLPMLAAFRMEQGLGPANHVLVDYDYVQA EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHEE QTSQGSAQPDSSAPGARQYIFPGRHKDASDAARKAAVRVAAQQVEARSGSGESNCHGLAA ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC GSTFTLNGHVNAALNAEYVVRAVEHSVAGSHYANSFTVFPLAVPFRAPLVTPRPLVAGTH CCEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCC TATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWVRVAQGMAGQGWGHLFLPRVG EEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC QEVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTSKNGSAGNELRMEDK CEEEEEEECCCCCCCEEEEEEECCEECCCEECCCCHHHHHHHHHCCCCCCCCCEEEECCC AGAEELYLHAQRDMNVAVENKLSTTVVGAGESHVVQKGDRLVEVQSGNETHKVSGTRSLE CCCCCEEEEECCCCCEEEECCCEEEEEECCCCHHHHCCCEEEEECCCCCEEEECCCEEEE VTGDETRTNGAAFTQEVSGAYKLKVSGDLVIDVTGAITIKSAGSVAIEAGTSLSNKAGTT ECCCCCCCCCCHHHHHCCCEEEEEECCCEEEEEECEEEEECCCCEEEECCCCCCCCCCCE LANKAGTTLSGEGLTVQQKASASHTVESGGMLELKGAMVKLN EHHCCCCEECCCCEEEEECCCCCCEECCCCEEEEECEEEEEC >Mature Secondary Structure MIPATATQSDSFATVTTPFGDDVLLLDGFAGREALSELFSFQLRMRSADKALDASRIVGQ CCCCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KVTVRLQRPGGFLRCFNGIVTRFAHTGADPSHAFYSAELAPRLWLLTLARDRRIFQNQSA EEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHEEEHHHCCCEEEEEHHHHHHHHCCCHH LDIIRTVLGEFEVAFDARVTASRYPVREYCVQYDESPLQFISRLMEEEGIFYYFTFSDGA HHHHHHHHHCEEEEEECEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCC HTMVLGDSPSAHAALAHEAELWGGQPGEQAAGLPMLAAFRMEQGLGPANHVLVDYDYVQA EEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEHHHEE QTSQGSAQPDSSAPGARQYIFPGRHKDASDAARKAAVRVAAQQVEARSGSGESNCHGLAA ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC GSTFTLNGHVNAALNAEYVVRAVEHSVAGSHYANSFTVFPLAVPFRAPLVTPRPLVAGTH CCEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEECCC TATVVGSQGEEIWTDQHGRIKLKFHWDQAPGADQDSSCWVRVAQGMAGQGWGHLFLPRVG EEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC QEVVVSYVDGDPDRPLVTGSVYNGQVTPPVTLPSMQTQSVIRSRTSKNGSAGNELRMEDK CEEEEEEECCCCCCCEEEEEEECCEECCCEECCCCHHHHHHHHHCCCCCCCCCEEEECCC AGAEELYLHAQRDMNVAVENKLSTTVVGAGESHVVQKGDRLVEVQSGNETHKVSGTRSLE CCCCCEEEEECCCCCEEEECCCEEEEEECCCCHHHHCCCEEEEECCCCCEEEECCCEEEE VTGDETRTNGAAFTQEVSGAYKLKVSGDLVIDVTGAITIKSAGSVAIEAGTSLSNKAGTT ECCCCCCCCCCHHHHHCCCEEEEEECCCEEEEEECEEEEECCCCEEEECCCCCCCCCCCE LANKAGTTLSGEGLTVQQKASASHTVESGGMLELKGAMVKLN EHHCCCCEECCCCEEEEECCCCCCEECCCCEEEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA