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The map label for this gene is glxA [H]

Identifier: 73541305

GI number: 73541305

Start: 1735545

End: 1736546

Strand: Reverse

Name: glxA [H]

Synonym: Reut_A1615

Alternate gene names: 73541305

Gene position: 1736546-1735545 (Counterclockwise)

Preceding gene: 73541311

Following gene: 73541304

Centisome position: 45.62

GC content: 64.27

Gene sequence:

>1002_bases
ATGACTCGAACTGTTGCCCTGCTGGTCTTTCCCGGCGTGCAGGCCCTGGACGTCAGTGGTCCGATGGATGTGTTTGCCGA
GGCGAACCGCTTCGTGCCCAGTAACGCGCGCTACGAGATCGAGGTCATCGGCATCGGCGAGGACGCGCTGGTTGCCTGCT
CCAATGGCTTGCTGCTCAAAGTGCACCGCGCGTATGCCGACGTCGACCCATCGGACACCTGCTTTGACCTGATGCTGGCC
GCGGGCGGGCCGGATTTGCCTTCGGCCGTCTGGGAAGCAGGTGCGTATGATTGGCTGCGACGCGTGTGCGCGGCCTCGCG
CCGTTACGGTTCGATCTGCAACGGCGCTTTCGCCCTCGCGCGGGCCGGCCTGCTAGACGACCGCACCGTTACCACGCACT
GGAATGATGCGGAAGCGCTCCGGCACCTCTGCCCCACGACCCGTGTGGAGGCAGACAGAATCTTTGTACGTGACAGCGAG
CTCTATACGTCGGCCGGTGTGACGGCTGGCATCGACCTTTCGCTATACCTGCTCGCACAGGACCATGGCGACGATGTGGC
ACTCAGCGTCGCCAGACGGCTGCTGGTGGTCATGCAGCGGGCGGGCGGCCAATCCCAGTTCAGTCCCTACCTGACGCCCT
ACGCGGAGCCGACCTCGCCGATTGCGCAGGTGCGCGAATACGTGCTGGCACACCTTGCGGACGACCTCAGCGTCAGCGTC
CTGGCCGCCATCGCGAAAATGAGCCTGCGCAACTTCGCGCGGATCTTTGCGCGGGAAGCCAGGATGACCCCCGCCGCCTT
CGTCGAAAGCGCCCGGGTCGATGCGGCACGGGTCATGCTCGAAAACGGCAAGGTTCCGCTCAAGCGCATCGCCTATGAAT
GCGGCTTCGGCGATCCCCACAATATGCGCCAGATCTTCAAACGACGGTTCGGTGTGTCGCCCCAGCAGTATCGCGCGACA
TTTTCCACGCCGGCAGAAAGCGCGGTCATTCCCGGGCCTTGA

Upstream 100 bases:

>100_bases
ATTCCGGCCATGGCACGGCAAGCCTCGCGCCCGGGAGACCATTTCCGCTATCGTTTGGAGTTCAACGAAGTTCTCGTCCA
GCGCCCTGGAAGCTACGCCC

Downstream 100 bases:

>100_bases
CACCGACGTAGACCTCAAGCCACCGCCGTTTGGCCGGAATCGCCCCCCGGCGCAGATGCTATCGCTAGTCCGGCATCGCC
ATACTTGTCGTGGATGCCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTRTVALLVFPGVQALDVSGPMDVFAEANRFVPSNARYEIEVIGIGEDALVACSNGLLLKVHRAYADVDPSDTCFDLMLA
AGGPDLPSAVWEAGAYDWLRRVCAASRRYGSICNGAFALARAGLLDDRTVTTHWNDAEALRHLCPTTRVEADRIFVRDSE
LYTSAGVTAGIDLSLYLLAQDHGDDVALSVARRLLVVMQRAGGQSQFSPYLTPYAEPTSPIAQVREYVLAHLADDLSVSV
LAAIAKMSLRNFARIFAREARMTPAAFVESARVDAARVMLENGKVPLKRIAYECGFGDPHNMRQIFKRRFGVSPQQYRAT
FSTPAESAVIPGP

Sequences:

>Translated_333_residues
MTRTVALLVFPGVQALDVSGPMDVFAEANRFVPSNARYEIEVIGIGEDALVACSNGLLLKVHRAYADVDPSDTCFDLMLA
AGGPDLPSAVWEAGAYDWLRRVCAASRRYGSICNGAFALARAGLLDDRTVTTHWNDAEALRHLCPTTRVEADRIFVRDSE
LYTSAGVTAGIDLSLYLLAQDHGDDVALSVARRLLVVMQRAGGQSQFSPYLTPYAEPTSPIAQVREYVLAHLADDLSVSV
LAAIAKMSLRNFARIFAREARMTPAAFVESARVDAARVMLENGKVPLKRIAYECGFGDPHNMRQIFKRRFGVSPQQYRAT
FSTPAESAVIPGP
>Mature_332_residues
TRTVALLVFPGVQALDVSGPMDVFAEANRFVPSNARYEIEVIGIGEDALVACSNGLLLKVHRAYADVDPSDTCFDLMLAA
GGPDLPSAVWEAGAYDWLRRVCAASRRYGSICNGAFALARAGLLDDRTVTTHWNDAEALRHLCPTTRVEADRIFVRDSEL
YTSAGVTAGIDLSLYLLAQDHGDDVALSVARRLLVVMQRAGGQSQFSPYLTPYAEPTSPIAQVREYVLAHLADDLSVSVL
AAIAKMSLRNFARIFAREARMTPAAFVESARVDAARVMLENGKVPLKRIAYECGFGDPHNMRQIFKRRFGVSPQQYRATF
STPAESAVIPGP

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36285; Mature: 36154

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTVALLVFPGVQALDVSGPMDVFAEANRFVPSNARYEIEVIGIGEDALVACSNGLLLK
CCCEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCEEE
VHRAYADVDPSDTCFDLMLAAGGPDLPSAVWEAGAYDWLRRVCAASRRYGSICNGAFALA
EEHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
RAGLLDDRTVTTHWNDAEALRHLCPTTRVEADRIFVRDSELYTSAGVTAGIDLSLYLLAQ
HCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEE
DHGDDVALSVARRLLVVMQRAGGQSQFSPYLTPYAEPTSPIAQVREYVLAHLADDLSVSV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LAAIAKMSLRNFARIFAREARMTPAAFVESARVDAARVMLENGKVPLKRIAYECGFGDPH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
NMRQIFKRRFGVSPQQYRATFSTPAESAVIPGP
HHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCC
>Mature Secondary Structure 
TRTVALLVFPGVQALDVSGPMDVFAEANRFVPSNARYEIEVIGIGEDALVACSNGLLLK
CCEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCEEE
VHRAYADVDPSDTCFDLMLAAGGPDLPSAVWEAGAYDWLRRVCAASRRYGSICNGAFALA
EEHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
RAGLLDDRTVTTHWNDAEALRHLCPTTRVEADRIFVRDSELYTSAGVTAGIDLSLYLLAQ
HCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEE
DHGDDVALSVARRLLVVMQRAGGQSQFSPYLTPYAEPTSPIAQVREYVLAHLADDLSVSV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LAAIAKMSLRNFARIFAREARMTPAAFVESARVDAARVMLENGKVPLKRIAYECGFGDPH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCH
NMRQIFKRRFGVSPQQYRATFSTPAESAVIPGP
HHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]