| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is xylJ [H]
Identifier: 73541201
GI number: 73541201
Start: 1630444
End: 1631226
Strand: Reverse
Name: xylJ [H]
Synonym: Reut_A1510
Alternate gene names: 73541201
Gene position: 1631226-1630444 (Counterclockwise)
Preceding gene: 73541202
Following gene: 73541200
Centisome position: 42.85
GC content: 65.13
Gene sequence:
>783_bases ATGACAGCCGATCTGATCACCTCGCTCAGCAACGAACTTCACCATGCGCTCGTCACGCGCTTGCCCGTGCCGCCCCTGAG CGGCCGTGGACTGAGCCTGGGCATCAACGACGCCTACCGCATCCAGCAAGGCTTCATTGCGCACCGGCTCGCGGCCGGCG ACCGCATCACGGGCAAGAAGATCGGCGTGACCAGCCAGGCCGTGCAGCAAATGCTCGATGTCCACCAGCCGGATTTCGGC ATCCTGCTGCAGAGCATGCACTATGCCGAAGGCCTGCCGATTCCCACCGACACGCTGATCCAGCCTCGCGCCGAAGGCGA GATCGCGTTCTTCCTGCGGCGCGACTTGCGCGGTCCCGGCGTCACGCGCGACGATGTGCTCGATGCCACTGAGGCCGTCG CGGCTTGCTTCGAGATCGTCGATTCGCGCATCCGGGACTGGCGCATCCGCATCGAGGACACCGTTGCCGACAACGCCTCG TGCGGCGTCTACGTGCTCGGCGACGAGCGTATCAGTCCGCACGCGCTGAACCTGGCTGCTTGCGCCATGACGCTCGAAAA GAACGGCGAATGCGTGGCCACGGGATCAGGCAGCGCCGCGCTGGGCCACCCCGCCGATGCGGTGGCGTGGCTGGCCAACA CGCTTGGCAGCTTCGGCATTCCACTACTGGCAGGCGAAACCATTCTATCGGGCTCGCTGGCGGCACTGATTCCCGTGCAA GCGGGGGACCGGTTGTCCATGCAGATCAGTGGCATCGGTAGCTGCACCGCACAATTCATCTGA
Upstream 100 bases:
>100_bases ACCGCGACTACGTGGCCTTCAACGCCAAGTATTCCTTCTGACCCGCGTGCGCCGCGGCGGCTTCACGCCGCGGCTGCATC GACCGAATTCCCCTTCCCCC
Downstream 100 bases:
>100_bases AGCGCTCACAACGAGGACGCGGCAACGCTCGACGCGGCGTTGCTGCACCGCGAGGATTCCTCCAACTCGACGTTGGTCCA TTACCCCGCGCGATCCAAAC
Product: 4-oxalocrotonate decarboxylase
Products: 2-oxopent-4-enoate; H2O
Alternate protein names: HPH; 2-oxopent-4-enoate hydratase [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MTADLITSLSNELHHALVTRLPVPPLSGRGLSLGINDAYRIQQGFIAHRLAAGDRITGKKIGVTSQAVQQMLDVHQPDFG ILLQSMHYAEGLPIPTDTLIQPRAEGEIAFFLRRDLRGPGVTRDDVLDATEAVAACFEIVDSRIRDWRIRIEDTVADNAS CGVYVLGDERISPHALNLAACAMTLEKNGECVATGSGSAALGHPADAVAWLANTLGSFGIPLLAGETILSGSLAALIPVQ AGDRLSMQISGIGSCTAQFI
Sequences:
>Translated_260_residues MTADLITSLSNELHHALVTRLPVPPLSGRGLSLGINDAYRIQQGFIAHRLAAGDRITGKKIGVTSQAVQQMLDVHQPDFG ILLQSMHYAEGLPIPTDTLIQPRAEGEIAFFLRRDLRGPGVTRDDVLDATEAVAACFEIVDSRIRDWRIRIEDTVADNAS CGVYVLGDERISPHALNLAACAMTLEKNGECVATGSGSAALGHPADAVAWLANTLGSFGIPLLAGETILSGSLAALIPVQ AGDRLSMQISGIGSCTAQFI >Mature_259_residues TADLITSLSNELHHALVTRLPVPPLSGRGLSLGINDAYRIQQGFIAHRLAAGDRITGKKIGVTSQAVQQMLDVHQPDFGI LLQSMHYAEGLPIPTDTLIQPRAEGEIAFFLRRDLRGPGVTRDDVLDATEAVAACFEIVDSRIRDWRIRIEDTVADNASC GVYVLGDERISPHALNLAACAMTLEKNGECVATGSGSAALGHPADAVAWLANTLGSFGIPLLAGETILSGSLAALIPVQA GDRLSMQISGIGSCTAQFI
Specific function: Conversion of 2-hydroxypent-2,4-dienoate into 4-hydroxy- 2-oxopentanoate [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=262, Percent_Identity=45.0381679389313, Blast_Score=215, Evalue=3e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: 4.2.1.80
Molecular weight: Translated: 27518; Mature: 27387
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADLITSLSNELHHALVTRLPVPPLSGRGLSLGINDAYRIQQGFIAHRLAAGDRITGKK CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCC IGVTSQAVQQMLDVHQPDFGILLQSMHYAEGLPIPTDTLIQPRAEGEIAFFLRRDLRGPG CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCC VTRDDVLDATEAVAACFEIVDSRIRDWRIRIEDTVADNASCGVYVLGDERISPHALNLAA CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHH CAMTLEKNGECVATGSGSAALGHPADAVAWLANTLGSFGIPLLAGETILSGSLAALIPVQ HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHCCCEEEEEEEC AGDRLSMQISGIGSCTAQFI CCCEEEEEECCCCCCCEECC >Mature Secondary Structure TADLITSLSNELHHALVTRLPVPPLSGRGLSLGINDAYRIQQGFIAHRLAAGDRITGKK CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCC IGVTSQAVQQMLDVHQPDFGILLQSMHYAEGLPIPTDTLIQPRAEGEIAFFLRRDLRGPG CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCC VTRDDVLDATEAVAACFEIVDSRIRDWRIRIEDTVADNASCGVYVLGDERISPHALNLAA CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHH CAMTLEKNGECVATGSGSAALGHPADAVAWLANTLGSFGIPLLAGETILSGSLAALIPVQ HHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCHHHCCCEEEEEEEC AGDRLSMQISGIGSCTAQFI CCCEEEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxy-2-oxopentanoate
Specific reaction: 4-hydroxy-2-oxopentanoate = 2-oxopent-4-enoate + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1791759 [H]