| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is tauC [H]
Identifier: 73541164
GI number: 73541164
Start: 1590678
End: 1591583
Strand: Reverse
Name: tauC [H]
Synonym: Reut_A1470
Alternate gene names: 73541164
Gene position: 1591583-1590678 (Counterclockwise)
Preceding gene: 73541165
Following gene: 73541163
Centisome position: 41.81
GC content: 68.43
Gene sequence:
>906_bases ATGACCGTACCCGCCCAACAGGTCGACGCTGCCGCCGTGGCAGCCCCCGCCGTCCCGACCCGGAGCACGGCTCCGGCCGG CCAGCCCGCCGCACCGCGCCGCGCCATGCGCACCGTCTCCGGTTACCGCATGCCGGGCGAAGGCTCCAGCTCGCGCATCG CCACCGTCACGGTAATGACGCTGCTGGCGCTGTGGTGGATCGCCAGCCACCTGCAGTGGCTGCCGCCGCTGTTCCTGCCC ACGCCGGAGGCCATCATCCGGGCCTTTATCGATGCCTGGAACGGCAATGTGCAAGGCGGCCTGCCGTTGCTGGACCACTT CCACGCCAGCCTGGTGCGCGTCTTCGGCGCCTTCGCGCTGGCCGTGCTCACCGCGGTGCCGATCGGCGTGCTGATGGGCG TGTCGCGCGTCGCGCGCGGCGTCTTCGATCCGCCAATCGAGTTCTACCGTCCGCTGCCGCCGCTGGCCTACCTGCCGCTG ATCGTGATCTGGTTCGGCATCGACGAGACCTCCAAGATCCTGCTGATCTACCTGGCCTGCTTCGCGCCGCTGGCCATGTC AGCGCGCGCCGGCGTGCGTTCGGTCACGATCGAGCAGATCAATGCGGCCTACTCGATGGGTGCCACGCCGTGGCAGGTGA TCCGCCATGTGGTGCTGCCCGCTGCGCTGCCCGACATCCTGACCGGCATGCGCATCGCCATCGGCTTCGGCTGGACCACG CTGGTCGCCGCCGAGATGGTCGCAGCGACCGCCGGACTCGGCCAGATGGTGCTCAATGCGTCCAACTTCCTGCGCACCGA CGTGGTGATCATGGGCATCCTGCTGATCGGGCTGATCGCCTTCCTGTTCGACCTGCTGATGCGCAAGTCGGAAACGTGGC TGGTGCCCTGGAAGGGCCGTATGTAA
Upstream 100 bases:
>100_bases GAATGCGGCGACGCGCGCGCCGTCAAGTCCGATCCGGAATTTATCCGCTATCGCGAAGAAATCGTCGACCTGATCCATGC CACGCCCTGAGGACAAAGCC
Downstream 100 bases:
>100_bases GACGACACCCGGCTCCGTCGGCAGGAGCACGAAGCGCCCGCCTGTGCCGCAGCCGCGGCCCGGGCGGGCGCTTTGCATTG GTGCAGCGGACGATGGCAGA
Product: binding-protein dependent transport system inner membrane protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTVPAQQVDAAAVAAPAVPTRSTAPAGQPAAPRRAMRTVSGYRMPGEGSSSRIATVTVMTLLALWWIASHLQWLPPLFLP TPEAIIRAFIDAWNGNVQGGLPLLDHFHASLVRVFGAFALAVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPL IVIWFGIDETSKILLIYLACFAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALPDILTGMRIAIGFGWTT LVAAEMVAATAGLGQMVLNASNFLRTDVVIMGILLIGLIAFLFDLLMRKSETWLVPWKGRM
Sequences:
>Translated_301_residues MTVPAQQVDAAAVAAPAVPTRSTAPAGQPAAPRRAMRTVSGYRMPGEGSSSRIATVTVMTLLALWWIASHLQWLPPLFLP TPEAIIRAFIDAWNGNVQGGLPLLDHFHASLVRVFGAFALAVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPL IVIWFGIDETSKILLIYLACFAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALPDILTGMRIAIGFGWTT LVAAEMVAATAGLGQMVLNASNFLRTDVVIMGILLIGLIAFLFDLLMRKSETWLVPWKGRM >Mature_300_residues TVPAQQVDAAAVAAPAVPTRSTAPAGQPAAPRRAMRTVSGYRMPGEGSSSRIATVTVMTLLALWWIASHLQWLPPLFLPT PEAIIRAFIDAWNGNVQGGLPLLDHFHASLVRVFGAFALAVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPLI VIWFGIDETSKILLIYLACFAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALPDILTGMRIAIGFGWTTL VAAEMVAATAGLGQMVLNASNFLRTDVVIMGILLIGLIAFLFDLLMRKSETWLVPWKGRM
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=254, Percent_Identity=52.755905511811, Blast_Score=231, Evalue=7e-62, Organism=Escherichia coli, GI87081802, Length=225, Percent_Identity=35.5555555555556, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1789033, Length=169, Percent_Identity=27.810650887574, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32417; Mature: 32286
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPAQQVDAAAVAAPAVPTRSTAPAGQPAAPRRAMRTVSGYRMPGEGSSSRIATVTVMT CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LLALWWIASHLQWLPPLFLPTPEAIIRAFIDAWNGNVQGGLPLLDHFHASLVRVFGAFAL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGIDETSKILLIYLAC HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALPDILTGMRIAIGFGWTT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVAAEMVAATAGLGQMVLNASNFLRTDVVIMGILLIGLIAFLFDLLMRKSETWLVPWKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC M C >Mature Secondary Structure TVPAQQVDAAAVAAPAVPTRSTAPAGQPAAPRRAMRTVSGYRMPGEGSSSRIATVTVMT CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LLALWWIASHLQWLPPLFLPTPEAIIRAFIDAWNGNVQGGLPLLDHFHASLVRVFGAFAL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH AVLTAVPIGVLMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGIDETSKILLIYLAC HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FAPLAMSARAGVRSVTIEQINAAYSMGATPWQVIRHVVLPAALPDILTGMRIAIGFGWTT HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVAAEMVAATAGLGQMVLNASNFLRTDVVIMGILLIGLIAFLFDLLMRKSETWLVPWKGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC M C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]