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The map label for this gene is qseB [H]

Identifier: 73541031

GI number: 73541031

Start: 1435794

End: 1436543

Strand: Direct

Name: qseB [H]

Synonym: Reut_A1337

Alternate gene names: 73541031

Gene position: 1435794-1436543 (Clockwise)

Preceding gene: 73541028

Following gene: 73541032

Centisome position: 37.72

GC content: 63.6

Gene sequence:

>750_bases
ATGTCGACTGCTCGACTTGCCAGGCTTCATTGCCGCGGATTGGCCTATATCTTTAAAAGCATAAAAGCAGGCCTGGAAAT
GAGAATACTTATTGTTGAAGACGACCCCATGCTGGGTGATGGCCTGTTGCATGGCCTGCAGCTCGTGGGATACGTCGTCG
ACTGGTTCACCACGGGTGCAGAGGGCGATCATGCACTTGGCATGGTGCACTACGATGCTGCCGTGCTCGACCTTGGACTG
CCGGGCGACGACGGCATGACGTGGCTGCGGCGCTGGCGCGAGCGCGGCTGCCAGATCCCGGTGCTGGTACTCACGGCGCG
TGACGCCATCGAGAGCCGCATCAGCGGCCTGGATTCGGGGGCCGACGATTATCTGGTCAAGCCGATTTCGCTGGATGAAC
TTGCCGCCCGGCTGCGCGCCATGACGCGCCGCGCCGCCGGAAACTCCGCGCCTGTCTGGCGGCACGGCGCACTTGAATTC
CACCCGGCCGCCAAGCAGGCCCTCTGGCACGGCAAGCCCGTGGACCTGACCAGCCGCGAGGCGATGCTGCTCGAACTGCT
GCTGGCCCACCCGAACCGCCTGCTGACGCGCGATTTTCTGCGCGACAAGCTCTATGACTGGCAGGGCGGCCTCGAAAGCA
ACACGCTGGAGGTGCATATCCACCACCTGCGCCGCAAGATCCATCCGAAGATCGTCCGCACATTCCGTGGCGCGGGCTAC
ACGCTCGGTGCTGCCGAGGACTGCGCATGA

Upstream 100 bases:

>100_bases
GCAAACAGTGTCGCGTGAACGGCGGGACGGCGGCTCGTTCAGGGCAACAGCGAAGGATAAGTGACGAACCTTAATGGCAG
ATTAAGGAATACTATGCAAA

Downstream 100 bases:

>100_bases
CGCTGCAGCGGCGCCTGATCCTGGCCGTGCTGATCGCGGCCCCGGTGGTGTGGCTGCTGACCATCGGCATGACCTACGTG
CGTGCGCGCCACGAAATCAA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSTARLARLHCRGLAYIFKSIKAGLEMRILIVEDDPMLGDGLLHGLQLVGYVVDWFTTGAEGDHALGMVHYDAAVLDLGL
PGDDGMTWLRRWRERGCQIPVLVLTARDAIESRISGLDSGADDYLVKPISLDELAARLRAMTRRAAGNSAPVWRHGALEF
HPAAKQALWHGKPVDLTSREAMLLELLLAHPNRLLTRDFLRDKLYDWQGGLESNTLEVHIHHLRRKIHPKIVRTFRGAGY
TLGAAEDCA

Sequences:

>Translated_249_residues
MSTARLARLHCRGLAYIFKSIKAGLEMRILIVEDDPMLGDGLLHGLQLVGYVVDWFTTGAEGDHALGMVHYDAAVLDLGL
PGDDGMTWLRRWRERGCQIPVLVLTARDAIESRISGLDSGADDYLVKPISLDELAARLRAMTRRAAGNSAPVWRHGALEF
HPAAKQALWHGKPVDLTSREAMLLELLLAHPNRLLTRDFLRDKLYDWQGGLESNTLEVHIHHLRRKIHPKIVRTFRGAGY
TLGAAEDCA
>Mature_248_residues
STARLARLHCRGLAYIFKSIKAGLEMRILIVEDDPMLGDGLLHGLQLVGYVVDWFTTGAEGDHALGMVHYDAAVLDLGLP
GDDGMTWLRRWRERGCQIPVLVLTARDAIESRISGLDSGADDYLVKPISLDELAARLRAMTRRAAGNSAPVWRHGALEFH
PAAKQALWHGKPVDLTSREAMLLELLLAHPNRLLTRDFLRDKLYDWQGGLESNTLEVHIHHLRRKIHPKIVRTFRGAGYT
LGAAEDCA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=50.2304147465438, Blast_Score=219, Evalue=1e-58,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=43.4389140271493, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=37.10407239819, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=33.4862385321101, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=33.9285714285714, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=36.9369369369369, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=36.322869955157, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=34.1991341991342, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=30.3964757709251, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=32.0512820512821, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=29.9107142857143, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=27.3504273504274, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1788713, Length=134, Percent_Identity=35.0746268656716, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=32.7102803738318, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=32.4074074074074, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27767; Mature: 27636

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTARLARLHCRGLAYIFKSIKAGLEMRILIVEDDPMLGDGLLHGLQLVGYVVDWFTTGA
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
EGDHALGMVHYDAAVLDLGLPGDDGMTWLRRWRERGCQIPVLVLTARDAIESRISGLDSG
CCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCC
ADDYLVKPISLDELAARLRAMTRRAAGNSAPVWRHGALEFHPAAKQALWHGKPVDLTSRE
CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHHCCCCCCCCHHH
AMLLELLLAHPNRLLTRDFLRDKLYDWQGGLESNTLEVHIHHLRRKIHPKIVRTFRGAGY
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCE
TLGAAEDCA
ECCCCCCCC
>Mature Secondary Structure 
STARLARLHCRGLAYIFKSIKAGLEMRILIVEDDPMLGDGLLHGLQLVGYVVDWFTTGA
CCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
EGDHALGMVHYDAAVLDLGLPGDDGMTWLRRWRERGCQIPVLVLTARDAIESRISGLDSG
CCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCC
ADDYLVKPISLDELAARLRAMTRRAAGNSAPVWRHGALEFHPAAKQALWHGKPVDLTSRE
CCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCEECCCEEECHHHHHHHHCCCCCCCCHHH
AMLLELLLAHPNRLLTRDFLRDKLYDWQGGLESNTLEVHIHHLRRKIHPKIVRTFRGAGY
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCE
TLGAAEDCA
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]