| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is 73541023
Identifier: 73541023
GI number: 73541023
Start: 1425645
End: 1426832
Strand: Direct
Name: 73541023
Synonym: Reut_A1329
Alternate gene names: NA
Gene position: 1425645-1426832 (Clockwise)
Preceding gene: 73541022
Following gene: 73541024
Centisome position: 37.45
GC content: 63.13
Gene sequence:
>1188_bases ATGCACCGCTTCACATCGCGCAGGCTCGCGCCTGCCTGCCTTGCCGTTGCTGCAATGCTTGCCGCCACGGGAGCCGTCCA GGCGCAGAGTGCGCAGGGCGGGAAGATCAAGGTAGGGTTCATGCTGCCCTATACGGGCACGTATGCGGCACTGGGCACGG CGATCGAAAACGGTTTCCGCATGTATGTGCAGCAGCAGGGGGGCAAGCTCGGCGGGCGCGATATCGAGTACTTCAAGGTT GACGACGAATCCGATCCCGCCAAGGCACCCGAGAACGCAACCAAGCTGATCAAGCGCGACCAGGTCGATGTAGTGGTGGG CACCGTGCATTCAGGCGTGCAGATGGGCATCGTCAAGGTGGCCAAGGAAAACAACACGCTGCTGATCATCCCGAATGCCG GCGTCGATGAGGCCACCGGCCCGCTGTGCGGTCCGAACATCTTCCGCTCGTCGTTCTCGAACTGGCAGCCCGGCTACGCC ATGGGCCACGTGCTGGCCGAGCGGGGCATGAAAAAGGTTGTCACGCTGACCTGGAAATATGCGGCGGGAGAGCAATCAGT AAAGGGCTTTAAGGAGGCCTTCGAGAGCAAGGGCGGCAAGGTGGTGAAGGAGCTGAGCCTGCCGTTCCCGAACGTGGAGT TCCAGGCGCTGATCACGGAAGTGGCCGCGCTCAAGCCGGACGCCGTGTTCGTGTTCTTCGCGGGCGGCGGTGCGGTCAAG TTCGTCAAGGATTGGGCCGGCGCGGGGCTCAAGGACAAGATCCCGCTCTATGGCTCGGGCTTCCTCACGGATGGCACGCT CGAGGCGCAGGGAAATGCCGCGCAGGGTCTGGAAACCACGCTGCACTATGCGGATGGCCTGAGCAACGCGCGCGACAAGA CCTTCCGCCTTGATTACGCCAAGACCTACAAGCTGCAGCCGGATGTGTATGCGGTGCAGGGCTATGACGCCGCGCAGTTG CTTGCCGCCGGGGCGAATGCGGTCAAGGGCGATATGTCCCGCAAGGCCGACGTCTACAAGGCCATGGAGACCGCCAAGGT GGACAGCCCGCGCGGTGCTTTCACGCTGTCGAAGGCGCATAACCCGGTGCAGGATTTCTACCTGCGCAAGGTAGATGGCC GCGAGAACAAGGTGAGCACCGTGGCGGTGAAGGCGCTGGCCGATCCGGCACGCGGTTGCCGTCTTTGA
Upstream 100 bases:
>100_bases GCCCCCTGTGTTGCATCCGGACACGCTCCGGACCCTGGGGGCAGGGACCGATCACGGTTTCGCAACAGGCAAACCGCCGG CTTGACCACCAGGAGACATC
Downstream 100 bases:
>100_bases TTCCCACCATCCTACCGGAATGAGGCCCGGTGCAGCGGCTTGCCGCGCGCCGGGCGTCCTCCCCCACGCAGCATGGACAT CGTCTCCTTCCTGATCCAGT
Product: extracellular ligand-binding receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MHRFTSRRLAPACLAVAAMLAATGAVQAQSAQGGKIKVGFMLPYTGTYAALGTAIENGFRMYVQQQGGKLGGRDIEYFKV DDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGPNIFRSSFSNWQPGYA MGHVLAERGMKKVVTLTWKYAAGEQSVKGFKEAFESKGGKVVKELSLPFPNVEFQALITEVAALKPDAVFVFFAGGGAVK FVKDWAGAGLKDKIPLYGSGFLTDGTLEAQGNAAQGLETTLHYADGLSNARDKTFRLDYAKTYKLQPDVYAVQGYDAAQL LAAGANAVKGDMSRKADVYKAMETAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRENKVSTVAVKALADPARGCRL
Sequences:
>Translated_395_residues MHRFTSRRLAPACLAVAAMLAATGAVQAQSAQGGKIKVGFMLPYTGTYAALGTAIENGFRMYVQQQGGKLGGRDIEYFKV DDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGPNIFRSSFSNWQPGYA MGHVLAERGMKKVVTLTWKYAAGEQSVKGFKEAFESKGGKVVKELSLPFPNVEFQALITEVAALKPDAVFVFFAGGGAVK FVKDWAGAGLKDKIPLYGSGFLTDGTLEAQGNAAQGLETTLHYADGLSNARDKTFRLDYAKTYKLQPDVYAVQGYDAAQL LAAGANAVKGDMSRKADVYKAMETAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRENKVSTVAVKALADPARGCRL >Mature_395_residues MHRFTSRRLAPACLAVAAMLAATGAVQAQSAQGGKIKVGFMLPYTGTYAALGTAIENGFRMYVQQQGGKLGGRDIEYFKV DDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGPNIFRSSFSNWQPGYA MGHVLAERGMKKVVTLTWKYAAGEQSVKGFKEAFESKGGKVVKELSLPFPNVEFQALITEVAALKPDAVFVFFAGGGAVK FVKDWAGAGLKDKIPLYGSGFLTDGTLEAQGNAAQGLETTLHYADGLSNARDKTFRLDYAKTYKLQPDVYAVQGYDAAQL LAAGANAVKGDMSRKADVYKAMETAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRENKVSTVAVKALADPARGCRL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42260; Mature: 42260
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFTSRRLAPACLAVAAMLAATGAVQAQSAQGGKIKVGFMLPYTGTYAALGTAIENGFR CCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHE MYVQQQGGKLGGRDIEYFKVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKV EEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCCHHEEEEEE AKENNTLLIIPNAGVDEATGPLCGPNIFRSSFSNWQPGYAMGHVLAERGMKKVVTLTWKY EECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEE AAGEQSVKGFKEAFESKGGKVVKELSLPFPNVEFQALITEVAALKPDAVFVFFAGGGAVK CCCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEE FVKDWAGAGLKDKIPLYGSGFLTDGTLEAQGNAAQGLETTLHYADGLSNARDKTFRLDYA EHHHHHCCCCCCCCCCCCCCCEECCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECC KTYKLQPDVYAVQGYDAAQLLAAGANAVKGDMSRKADVYKAMETAKVDSPRGAFTLSKAH EEEEECCCEEEECCCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCC NPVQDFYLRKVDGRENKVSTVAVKALADPARGCRL CCHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHRFTSRRLAPACLAVAAMLAATGAVQAQSAQGGKIKVGFMLPYTGTYAALGTAIENGFR CCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHE MYVQQQGGKLGGRDIEYFKVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKV EEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCCHHEEEEEE AKENNTLLIIPNAGVDEATGPLCGPNIFRSSFSNWQPGYAMGHVLAERGMKKVVTLTWKY EECCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEEE AAGEQSVKGFKEAFESKGGKVVKELSLPFPNVEFQALITEVAALKPDAVFVFFAGGGAVK CCCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEE FVKDWAGAGLKDKIPLYGSGFLTDGTLEAQGNAAQGLETTLHYADGLSNARDKTFRLDYA EHHHHHCCCCCCCCCCCCCCCEECCEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEEECC KTYKLQPDVYAVQGYDAAQLLAAGANAVKGDMSRKADVYKAMETAKVDSPRGAFTLSKAH EEEEECCCEEEECCCCHHHHHHHCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCC NPVQDFYLRKVDGRENKVSTVAVKALADPARGCRL CCHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA