| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is epsF [H]
Identifier: 73540448
GI number: 73540448
Start: 804353
End: 805504
Strand: Reverse
Name: epsF [H]
Synonym: Reut_A0744
Alternate gene names: 73540448
Gene position: 805504-804353 (Counterclockwise)
Preceding gene: 73540453
Following gene: 73540447
Centisome position: 21.16
GC content: 67.53
Gene sequence:
>1152_bases TTGTCAGCCACAGCCGCCCGCCGCCCGCGCATTGCCTACCTGATCACGAATTCGGAGATCGGTGGAGCACAGGCGCATGT GGCAGACCTGATGCAAGCAATGCGCCAGCATGCCGATGTGACCTTGCTGGCGGGTGGCGACGGGCACCTGTTCGCCACGG CGCAGGCGGCTGGCATTCCGGCCATACGCTTGCGCACGCTGGACAATGCGCTCTCTCCGGTGCGCGCGGTTCGGACCCTC CGAGAGTTGAATACCGCACTGCGTCAGGTTGCACCCGACATCATCCATGCCCACAGCGCCAAGGCAGGCGCACTTGGGCG CGTCGCCGGCAGGATGCTGGGGATTCCTGTGATCTATACGGTGCACGGCTTCGCTTTCAAGCCGGCCGCGCCCTGGCGCC AGCGCCTGGCAGCGCGCGTGACGGAATGGCTGCTAGCGCCCTTGACCACCCGACTGATCTGCGTGGCGGACGGCGAACGG GAACTGGCACGCAGCCTGCCGATCGCCGCGTCGCGTATCAGTGTCATCCGCAACGGGCTGGACGATGTGACAGCGCGCGC CACTCCTGGCGAGCCGCTACGCCGCGTCGCCATGGTTGCGCGCTTTGCCCGTCCCAAACGCCCCGACGTCCTTCTGGACG CCTTTGCGCAGGCCGGGCTGACGGATTGCGAACTGGTCATGGCGGGCGATGGTCCGCAACTGGCGGCCATCCGCGCTCGG GCACAGGCCTTGGCGCCAGCAATTGTGGGCCTGCCGGGCAGTGTCCATGATGTTCCGGGCCTGCTGGCCTCGGCACAGGT GTTTGTGCTGGTTTCAGACCATGAGGCCTTCCCTCTGTCCGTGCTGGAAGCCATGCGAGCCTGCTTGCCAGTGATCGCCA GCGACCTGCCCGGCATCCGCGAACAACTCGATGACGGGCGCTGTGGCATCCTGCTGGAAGACAACCGCCCGCAAACCCTG GTGCGCGCGCTTCAGGCGCTGGCCGCCGACGCGCCCCGGCGCGAGGCTCTCGGCCGCCTGGCACGCCAGCGCTGGGAGCA ACAGTTCGGCCTGACGCGCATGATCCAGGCCACCTGGGCCGTCTACCAGGACACGCTCGCCAGCGCCCCGCGCTACCAAG CGTCCGCACGACAACGCCATGCAGAAAACTGA
Upstream 100 bases:
>100_bases CTCTTGGCGCCCGGCGCGTTCGTGCGCGAGGCCAGCCTTACCTGTCCTACGTGATCTGTCCTGCAATAAGCCAGCCACGC TCCCGTTTGCCCGGAATCCC
Downstream 100 bases:
>100_bases CAGCCTGCGCCGGCCCGCGGCCAGCCGCGCCACCGGCTCCGAAACCATCCGCCGCGCCAGCCGCATGCTGGCATGGGCCC TATTCGGATTGCTGTTGTTC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSATAARRPRIAYLITNSEIGGAQAHVADLMQAMRQHADVTLLAGGDGHLFATAQAAGIPAIRLRTLDNALSPVRAVRTL RELNTALRQVAPDIIHAHSAKAGALGRVAGRMLGIPVIYTVHGFAFKPAAPWRQRLAARVTEWLLAPLTTRLICVADGER ELARSLPIAASRISVIRNGLDDVTARATPGEPLRRVAMVARFARPKRPDVLLDAFAQAGLTDCELVMAGDGPQLAAIRAR AQALAPAIVGLPGSVHDVPGLLASAQVFVLVSDHEAFPLSVLEAMRACLPVIASDLPGIREQLDDGRCGILLEDNRPQTL VRALQALAADAPRREALGRLARQRWEQQFGLTRMIQATWAVYQDTLASAPRYQASARQRHAEN
Sequences:
>Translated_383_residues MSATAARRPRIAYLITNSEIGGAQAHVADLMQAMRQHADVTLLAGGDGHLFATAQAAGIPAIRLRTLDNALSPVRAVRTL RELNTALRQVAPDIIHAHSAKAGALGRVAGRMLGIPVIYTVHGFAFKPAAPWRQRLAARVTEWLLAPLTTRLICVADGER ELARSLPIAASRISVIRNGLDDVTARATPGEPLRRVAMVARFARPKRPDVLLDAFAQAGLTDCELVMAGDGPQLAAIRAR AQALAPAIVGLPGSVHDVPGLLASAQVFVLVSDHEAFPLSVLEAMRACLPVIASDLPGIREQLDDGRCGILLEDNRPQTL VRALQALAADAPRREALGRLARQRWEQQFGLTRMIQATWAVYQDTLASAPRYQASARQRHAEN >Mature_382_residues SATAARRPRIAYLITNSEIGGAQAHVADLMQAMRQHADVTLLAGGDGHLFATAQAAGIPAIRLRTLDNALSPVRAVRTLR ELNTALRQVAPDIIHAHSAKAGALGRVAGRMLGIPVIYTVHGFAFKPAAPWRQRLAARVTEWLLAPLTTRLICVADGERE LARSLPIAASRISVIRNGLDDVTARATPGEPLRRVAMVARFARPKRPDVLLDAFAQAGLTDCELVMAGDGPQLAAIRARA QALAPAIVGLPGSVHDVPGLLASAQVFVLVSDHEAFPLSVLEAMRACLPVIASDLPGIREQLDDGRCGILLEDNRPQTLV RALQALAADAPRREALGRLARQRWEQQFGLTRMIQATWAVYQDTLASAPRYQASARQRHAEN
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 41198; Mature: 41067
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATAARRPRIAYLITNSEIGGAQAHVADLMQAMRQHADVTLLAGGDGHLFATAQAAGIP CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHCCCC AIRLRTLDNALSPVRAVRTLRELNTALRQVAPDIIHAHSAKAGALGRVAGRMLGIPVIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE VHGFAFKPAAPWRQRLAARVTEWLLAPLTTRLICVADGERELARSLPIAASRISVIRNGL ECCCEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHCCH DDVTARATPGEPLRRVAMVARFARPKRPDVLLDAFAQAGLTDCELVMAGDGPQLAAIRAR HHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH AQALAPAIVGLPGSVHDVPGLLASAQVFVLVSDHEAFPLSVLEAMRACLPVIASDLPGIR HHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHH EQLDDGRCGILLEDNRPQTLVRALQALAADAPRREALGRLARQRWEQQFGLTRMIQATWA HHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYQDTLASAPRYQASARQRHAEN HHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure SATAARRPRIAYLITNSEIGGAQAHVADLMQAMRQHADVTLLAGGDGHLFATAQAAGIP CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEHHCCCC AIRLRTLDNALSPVRAVRTLRELNTALRQVAPDIIHAHSAKAGALGRVAGRMLGIPVIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE VHGFAFKPAAPWRQRLAARVTEWLLAPLTTRLICVADGERELARSLPIAASRISVIRNGL ECCCEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHCCHHHHHHHHHHCCH DDVTARATPGEPLRRVAMVARFARPKRPDVLLDAFAQAGLTDCELVMAGDGPQLAAIRAR HHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH AQALAPAIVGLPGSVHDVPGLLASAQVFVLVSDHEAFPLSVLEAMRACLPVIASDLPGIR HHHHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHH EQLDDGRCGILLEDNRPQTLVRALQALAADAPRREALGRLARQRWEQQFGLTRMIQATWA HHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYQDTLASAPRYQASARQRHAEN HHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]