| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is rmlA1 [H]
Identifier: 73540420
GI number: 73540420
Start: 773697
End: 774584
Strand: Direct
Name: rmlA1 [H]
Synonym: Reut_A0714
Alternate gene names: 73540420
Gene position: 773697-774584 (Clockwise)
Preceding gene: 73540419
Following gene: 73540421
Centisome position: 20.33
GC content: 57.09
Gene sequence:
>888_bases GTGGTCAATATGCGCAAAGGCATCATCCTGGCCGGGGGTTCCGGCACGCGGCTCTATCCCATCACGCGGTCTGTATCGAA GCAGCTGCTGCCGGTATATGACAAGCCGATGATCTACTATCCGCTGTCCACGCTGATGCTCGCGGGGATTCGGGATATTC TGATTATTTCCACGCCGGAAGATACGCCGCGCTTTTCCGACATGCTCGGTGACGGCAGCAAGTGGGGTCTTAACCTCCAG TATGCAGTGCAGCCGTCTCCTGACGGCCTGGCCCAGGCGTTCATCATCGGTCGCGATTTCATCGGGAATGACCCGTCGAC GCTTATCCTCGGCGACAACATCTTTCATGGTCATGATCTCGTGAGCCAGCTGACGCGCTCCTCGGCCCAGTCCCAGGGTG CAACGGTTTTTGCGTATCACGTGCATGATCCCGAGCGATATGGTGTCGTCGAATTCGACCAGAATTTCCGTGCCCTATCG CTGGAAGAAAAGCCGCTGAAGCCGCGTTCCAATTATGCGGTGACGGGCCTGTACTTCTACGACAACCAGGTCTGCGATAT CGCGGCTGACATCAAGCCGTCGGCACGCGGTGAGCTCGAAATCACCGATGTCAACAAGCAGTACCTGTCCCAAAATCAAC TCGACGTCGAGATCATGGGGCGGGGCTACGCGTGGCTGGATACTGGCACGCATGATTCGTTGCTGGAAGCCGCGAGCTTT ATTGCAACGTTGCAGAATCGGCAGGGGCTGATGGTGGCGTGTCCTGAGGAGATTGCCTATCGAAGCAAATGGATCTCAGT GGAACAGGTGGCGGCGCTCGCCCAGCCGCTGGCAAAGAACGGATACGGTCAGTATCTGCAGCGCATCGTATCTGACCCGG TCAAATAA
Upstream 100 bases:
>100_bases CGAGACTGGATACCACGCGCCTGCAGGAAACCTTCGGCATCCATCTACCGGACTGGAAGCAGGGCGTGCAGTTCCTGCTC GATCAGATTCTTCCCTAAGA
Downstream 100 bases:
>100_bases CCAAGCATCAGGCCTCACCATGAATCTGACTGTCACTCCCACCGCCATCCCGGAGGTGAAGATCATCGAGCCAAAGGTAT TTGGCGACGACCGAGGATTT
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 1; dTDP-glucose pyrophosphorylase 1; dTDP-glucose synthase 1 [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVNMRKGIILAGGSGTRLYPITRSVSKQLLPVYDKPMIYYPLSTLMLAGIRDILIISTPEDTPRFSDMLGDGSKWGLNLQ YAVQPSPDGLAQAFIIGRDFIGNDPSTLILGDNIFHGHDLVSQLTRSSAQSQGATVFAYHVHDPERYGVVEFDQNFRALS LEEKPLKPRSNYAVTGLYFYDNQVCDIAADIKPSARGELEITDVNKQYLSQNQLDVEIMGRGYAWLDTGTHDSLLEAASF IATLQNRQGLMVACPEEIAYRSKWISVEQVAALAQPLAKNGYGQYLQRIVSDPVK
Sequences:
>Translated_295_residues MVNMRKGIILAGGSGTRLYPITRSVSKQLLPVYDKPMIYYPLSTLMLAGIRDILIISTPEDTPRFSDMLGDGSKWGLNLQ YAVQPSPDGLAQAFIIGRDFIGNDPSTLILGDNIFHGHDLVSQLTRSSAQSQGATVFAYHVHDPERYGVVEFDQNFRALS LEEKPLKPRSNYAVTGLYFYDNQVCDIAADIKPSARGELEITDVNKQYLSQNQLDVEIMGRGYAWLDTGTHDSLLEAASF IATLQNRQGLMVACPEEIAYRSKWISVEQVAALAQPLAKNGYGQYLQRIVSDPVK >Mature_295_residues MVNMRKGIILAGGSGTRLYPITRSVSKQLLPVYDKPMIYYPLSTLMLAGIRDILIISTPEDTPRFSDMLGDGSKWGLNLQ YAVQPSPDGLAQAFIIGRDFIGNDPSTLILGDNIFHGHDLVSQLTRSSAQSQGATVFAYHVHDPERYGVVEFDQNFRALS LEEKPLKPRSNYAVTGLYFYDNQVCDIAADIKPSARGELEITDVNKQYLSQNQLDVEIMGRGYAWLDTGTHDSLLEAASF IATLQNRQGLMVACPEEIAYRSKWISVEQVAALAQPLAKNGYGQYLQRIVSDPVK
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=252, Percent_Identity=24.2063492063492, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI11761619, Length=252, Percent_Identity=24.2063492063492, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788351, Length=291, Percent_Identity=72.8522336769759, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1790224, Length=285, Percent_Identity=64.9122807017544, Blast_Score=398, Evalue=1e-112, Organism=Caenorhabditis elegans, GI133931050, Length=242, Percent_Identity=23.5537190082645, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320148, Length=280, Percent_Identity=27.1428571428571, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI21355443, Length=250, Percent_Identity=23.6, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24644084, Length=250, Percent_Identity=23.6, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 32725; Mature: 32725
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNMRKGIILAGGSGTRLYPITRSVSKQLLPVYDKPMIYYPLSTLMLAGIRDILIISTPE CCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEEEECCC DTPRFSDMLGDGSKWGLNLQYAVQPSPDGLAQAFIIGRDFIGNDPSTLILGDNIFHGHDL CCCHHHHHHCCCCCCCEEEEEEECCCCCHHHEEEEEECHHCCCCCCEEEEECCCCCHHHH VSQLTRSSAQSQGATVFAYHVHDPERYGVVEFDQNFRALSLEEKPLKPRSNYAVTGLYFY HHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEEEE DNQVCDIAADIKPSARGELEITDVNKQYLSQNQLDVEIMGRGYAWLDTGTHDSLLEAASF CCCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHHHH IATLQNRQGLMVACPEEIAYRSKWISVEQVAALAQPLAKNGYGQYLQRIVSDPVK HHHHHCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MVNMRKGIILAGGSGTRLYPITRSVSKQLLPVYDKPMIYYPLSTLMLAGIRDILIISTPE CCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEEEECCC DTPRFSDMLGDGSKWGLNLQYAVQPSPDGLAQAFIIGRDFIGNDPSTLILGDNIFHGHDL CCCHHHHHHCCCCCCCEEEEEEECCCCCHHHEEEEEECHHCCCCCCEEEEECCCCCHHHH VSQLTRSSAQSQGATVFAYHVHDPERYGVVEFDQNFRALSLEEKPLKPRSNYAVTGLYFY HHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEEEE DNQVCDIAADIKPSARGELEITDVNKQYLSQNQLDVEIMGRGYAWLDTGTHDSLLEAASF CCCEEEEEECCCCCCCCEEEEEECCHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHHHH IATLQNRQGLMVACPEEIAYRSKWISVEQVAALAQPLAKNGYGQYLQRIVSDPVK HHHHHCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7517391; 9097040; 9278503; 7517390 [H]