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The map label for this gene is fdhD [H]

Identifier: 73540393

GI number: 73540393

Start: 740196

End: 741026

Strand: Direct

Name: fdhD [H]

Synonym: Reut_A0687

Alternate gene names: 73540393

Gene position: 740196-741026 (Clockwise)

Preceding gene: 73540392

Following gene: 73540394

Centisome position: 19.45

GC content: 64.62

Gene sequence:

>831_bases
ATGCCACTGCGTCCCGAACTGACTCACGCAGCTGTTCCCCTGATCGAAGAGGTCGAAGTCGTCGACGAGCTGGGACGCGC
GCGTCCGGCCTACCTGCCCGGCGAGCGCCCGCTGACGGTCTATCTCGACAAGCGCGAACTGGTCACGCTGATGACCCTCG
GCGGCGCGCCCGAGCACCTCGTGCTCGGCTACCTGCGCAACCAGCGGCTGGTGGAATCGATCGAGGACATCGCCGCCGTG
CAGGTGGACTGGGAAACGGAATCCGCCGCCGTGACCACCCGGACCGGCGTCGACCGCATCGAGGAGCGCACCGCGCGGCG
CGTGGTGACGACGGGCTGCGGGCAGGGCACGGTGTTTGGCTCCTTGCTGGACGAGATCGACAATATCCAGCTGCCCGCCG
GTGCCACGCTCGATCAGGACACGCTGTACGGCATCGTCGACACCATCCGCCTGCAGCAGTCGGTGTACAAGCAGGCTGGC
TCGGTGCATGGCTGCGCACTGTTCCGCGGCAGCGAACTTCTGATGTTTGTCGAAGACGTGGGCCGCCACAACGCGGTGGA
CGCGATTGCTGGACGCATGTGGCTGGAAGACATGCGCGGCGACGACAAGGTCTTCTACACCACCGGCCGGCTTACCTCCG
AAATGGTGATCAAGGGCGCGCAGATGGGGATTCCGTTCCTGCTATCGCGCTCGGGCGTCACGCAGATGGGCTACCAGATG
GCGCAACGGGTCAATATGACGCTGTTTGCGAGGTGTACGGGCAAGCACTTCCTGCTCTATACGGGCAAGGAGCGCTTTCA
CCATCGACTGCCTGAGGAAGTTGTGGCCTGA

Upstream 100 bases:

>100_bases
GCAGCAGTACAATCGACCGCAAAGGCGCCTTAACCTGCGCCCCATCGCTTGCCAGGCCGGCGTGGTGGGGCAAACCTGAG
CAGCCCCGACTCCGCCATCC

Downstream 100 bases:

>100_bases
GCGGCACTTAATTGAGTGCCGGTGGGGGTCCGGATTGGTTGTACAATTCGGCGCACTCTGGCTAAGCGTTTACCCCTCCC
GACCCTATGAGCATCAAATC

Product: formate dehydrogenase, subunit FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MPLRPELTHAAVPLIEEVEVVDELGRARPAYLPGERPLTVYLDKRELVTLMTLGGAPEHLVLGYLRNQRLVESIEDIAAV
QVDWETESAAVTTRTGVDRIEERTARRVVTTGCGQGTVFGSLLDEIDNIQLPAGATLDQDTLYGIVDTIRLQQSVYKQAG
SVHGCALFRGSELLMFVEDVGRHNAVDAIAGRMWLEDMRGDDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYQM
AQRVNMTLFARCTGKHFLLYTGKERFHHRLPEEVVA

Sequences:

>Translated_276_residues
MPLRPELTHAAVPLIEEVEVVDELGRARPAYLPGERPLTVYLDKRELVTLMTLGGAPEHLVLGYLRNQRLVESIEDIAAV
QVDWETESAAVTTRTGVDRIEERTARRVVTTGCGQGTVFGSLLDEIDNIQLPAGATLDQDTLYGIVDTIRLQQSVYKQAG
SVHGCALFRGSELLMFVEDVGRHNAVDAIAGRMWLEDMRGDDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYQM
AQRVNMTLFARCTGKHFLLYTGKERFHHRLPEEVVA
>Mature_275_residues
PLRPELTHAAVPLIEEVEVVDELGRARPAYLPGERPLTVYLDKRELVTLMTLGGAPEHLVLGYLRNQRLVESIEDIAAVQ
VDWETESAAVTTRTGVDRIEERTARRVVTTGCGQGTVFGSLLDEIDNIQLPAGATLDQDTLYGIVDTIRLQQSVYKQAGS
VHGCALFRGSELLMFVEDVGRHNAVDAIAGRMWLEDMRGDDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYQMA
QRVNMTLFARCTGKHFLLYTGKERFHHRLPEEVVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=256, Percent_Identity=26.5625, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 30705; Mature: 30574

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLRPELTHAAVPLIEEVEVVDELGRARPAYLPGERPLTVYLDKRELVTLMTLGGAPEHL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHH
VLGYLRNQRLVESIEDIAAVQVDWETESAAVTTRTGVDRIEERTARRVVTTGCGQGTVFG
HHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLLDEIDNIQLPAGATLDQDTLYGIVDTIRLQQSVYKQAGSVHGCALFRGSELLMFVEDV
HHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHC
GRHNAVDAIAGRMWLEDMRGDDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYQM
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEECCCCHHHHHHHH
AQRVNMTLFARCTGKHFLLYTGKERFHHRLPEEVVA
HHHCCEEEEEEECCCEEEEEECCHHHHHCCCHHHCC
>Mature Secondary Structure 
PLRPELTHAAVPLIEEVEVVDELGRARPAYLPGERPLTVYLDKRELVTLMTLGGAPEHL
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCHHH
VLGYLRNQRLVESIEDIAAVQVDWETESAAVTTRTGVDRIEERTARRVVTTGCGQGTVFG
HHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
SLLDEIDNIQLPAGATLDQDTLYGIVDTIRLQQSVYKQAGSVHGCALFRGSELLMFVEDV
HHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHC
GRHNAVDAIAGRMWLEDMRGDDKVFYTTGRLTSEMVIKGAQMGIPFLLSRSGVTQMGYQM
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEECCCCHHHHHHHH
AQRVNMTLFARCTGKHFLLYTGKERFHHRLPEEVVA
HHHCCEEEEEEECCCEEEEEECCHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]