Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540385
Identifier: 73540385
GI number: 73540385
Start: 731235
End: 733388
Strand: Direct
Name: 73540385
Synonym: Reut_A0679
Alternate gene names: NA
Gene position: 731235-733388 (Clockwise)
Preceding gene: 73540384
Following gene: 73540386
Centisome position: 19.21
GC content: 69.87
Gene sequence:
>2154_bases ATGCCGACGCTGATTTGCAGTTGCAATGAGACCATGCCGCTTGATGGGGCGGCGCTGTCGCAAGCCCATGGTGGCCCGCT TAAGGTCCACCGCCTGCTGTGTCGCCGGGAGATCGGCGATTTCATGGCGGCGCTCGACGGCACGGACGACGTGATCGTCG CCTGCACGCAGGAGCGGCATCTTTTTGCCGAGGTGGCCGCGCAGGCCGCGCGCGGCGACAACGGCCGCCCGGTGGTGGTC GCGCCTGTGCGCTTCGTCAATATCCGCGAGACCGGCGGCTGGTCGCAGGGCGCAAAGCGCGACCCGAAGACCGCCAACGC CAAGATTGCCGCGCTGCTGGCCGTCGCCGCGCTGCCCGAGCCGGACCCGGTCCCCGTGGTGGACTACCGTTCAGACGGCT CCGTGCTCGTGATGGGCCCCCCCGATCGCGCGTTGCCGTGGGCCGAACGTCTGGCGGCGATGTCGTTGGAGGTCACCGTC CTGCTGACGCACGGCGACATTCAGGTGGCATCGGCTGCCGCGCCAGCGGAGCGTGCCTGGCCAGTGCACAGCGGAACGCT GCGCGCGCTATCCGGGTGGCTGGGCGCGTTCGAGGCCTCGTGGGATACCGGCGCGGGCCGCGGCAACCCGATCGACCTCG ATCTGTGCACGCGCTGCAATGCCTGCATCGAAGCCTGTCCCGAGAACGCGATCGACTTCAGTTACCAGATCGACATGGAC CGCTGTCGTGCCCACCGCGATTGCGTGCGCGCCTGCGGCGCGGCGGCTGCGATCGATTTCGACCGGCCGGCGGCGGTTGC CGGGGGCCGTTTCGACCTGGTCTTCGACCTCAATGACACGCCGGCCTTTACGATGCACCAGCCGCCGCAGGGCTACCTGC ACGCAGGCGGCGCCGCACTGCGCCAGCAACAACAGGCGCTGGCCCTGACGCAGCTCGTGGGCGAGTTCGAAAAGCCGAAA TTCTTCCGCTACAAGGAAAGCCTCTGCGCCCACGGCCGCAACCAGACCACCGGCTGCACGGCCTGTATCGACATCTGTTC GACGCAGGCGATCCGCTCGCAATGGCATGACGGCAAGGGACGCATCGAGGTCACGCCAAATCTCTGCATGGGCTGCGGAG CGTGCACCACGGTCTGCCCGAGCGGGGCAATCAGCTATGCGTATCCGGGCCCGGAGGTGCTGGGCACGCGCCTGCGCACG CTGCTGTCGGCGTATCGCTCGGCAGGCGGCCGAGACGCCGTGGTGCTGCTGCATGGCGACGAGGCTGGCACGCCGGCCAT CCTGGCGCTCGGGCGTGCCGCGCGCGCCGGACTGGCGCAGGGCGTGCCGCCGAACGTGATGCCGGTGCAGGTGTTCCATC CGGCCTCGGCCGGGCTGGAACTCTGGCTGGCGGCGCTGTGCTGGGGCGCGGCGCATGTGGCGATACTCCTGACCGGTGAC GAGGCGCCGCAGTACCGTACCGCCCTGCAGGAGCAGATCGATGTGGCGCGGGCGCTGCTGGGGGGACTTGGCTACAAGGC CGGCGCGGTGTCGCTGGTCGAGGCAGCCGATGCTTCATCGCTGGATGCCGGGCTTGCCGCGCTGCGGCCCGCCCGCCACG CCTTGCCCCCGGCGCCCTTCGGTGCCGTGGCCGCCAAGCGCGAAATGTTCGACTTCGCGCTCGACCATCTCATGCGGCAT GCGCCCGTACCGGCCGATATCGTTCCGCTGCCATCCGCCGCCCCGATCGGCGCGGTAGTCGTGGATACCGCAAGCTGCAC GCTGTGCATGGCCTGCGCGGGCGCTTGCCCGACCCAGGCGCTGCGCGACAACCCGGAACGCCCGGTGCTGGGGTTCCTGG AGCGCAACTGCGTCCAGTGCGGCCTGTGCGAGAAGACCTGCCCGGAACACGCGATCACGCTCGTGCCCCGCCTGCTGACC GGCGAGGCCGCGCGGCGCAACGTCACGCTCAACGAGTCGCAGCCATTCCACTGTGTGCGCTGCGCCAAGCCGTTCGGCAC GGCGCAGATGGTGGAATCGATGCTGGTCCGGCTGGCCGGCCATCCCGCCTTTGCCGGCGCGGCCGCCGAGCGCCTCAAGA TGTGCCCGGACTGCCGCGTCGTCGACATGATGGAGCGCGATCCCGGCGCCATTAGCGGCGCCACGCTTCGATAA
Upstream 100 bases:
>100_bases GCCCCGCGGCTGCAGCCGCGCCTAGAATAGGACTCCCCATGAACTCCCGGCCTGCAGACCCTCGCAAGAAGGGCATCCGG GCCGGTCAGCCGGATTCGCC
Downstream 100 bases:
>100_bases GCGTTTGGAGCCTCACCAAAAATTTCATCACGACATGACAGATTTTCAGCCCATCCAGCTCACGGCTGCGGCGCCCGTCG GCGACGCCGAGGACATTGCC
Product: 4Fe-4S ferredoxin, iron-sulfur binding
Products: NA
Alternate protein names: 4Fe-4S Ferredoxin; 4fe-4S Ferredoxin
Number of amino acids: Translated: 717; Mature: 716
Protein sequence:
>717_residues MPTLICSCNETMPLDGAALSQAHGGPLKVHRLLCRREIGDFMAALDGTDDVIVACTQERHLFAEVAAQAARGDNGRPVVV APVRFVNIRETGGWSQGAKRDPKTANAKIAALLAVAALPEPDPVPVVDYRSDGSVLVMGPPDRALPWAERLAAMSLEVTV LLTHGDIQVASAAAPAERAWPVHSGTLRALSGWLGAFEASWDTGAGRGNPIDLDLCTRCNACIEACPENAIDFSYQIDMD RCRAHRDCVRACGAAAAIDFDRPAAVAGGRFDLVFDLNDTPAFTMHQPPQGYLHAGGAALRQQQQALALTQLVGEFEKPK FFRYKESLCAHGRNQTTGCTACIDICSTQAIRSQWHDGKGRIEVTPNLCMGCGACTTVCPSGAISYAYPGPEVLGTRLRT LLSAYRSAGGRDAVVLLHGDEAGTPAILALGRAARAGLAQGVPPNVMPVQVFHPASAGLELWLAALCWGAAHVAILLTGD EAPQYRTALQEQIDVARALLGGLGYKAGAVSLVEAADASSLDAGLAALRPARHALPPAPFGAVAAKREMFDFALDHLMRH APVPADIVPLPSAAPIGAVVVDTASCTLCMACAGACPTQALRDNPERPVLGFLERNCVQCGLCEKTCPEHAITLVPRLLT GEAARRNVTLNESQPFHCVRCAKPFGTAQMVESMLVRLAGHPAFAGAAAERLKMCPDCRVVDMMERDPGAISGATLR
Sequences:
>Translated_717_residues MPTLICSCNETMPLDGAALSQAHGGPLKVHRLLCRREIGDFMAALDGTDDVIVACTQERHLFAEVAAQAARGDNGRPVVV APVRFVNIRETGGWSQGAKRDPKTANAKIAALLAVAALPEPDPVPVVDYRSDGSVLVMGPPDRALPWAERLAAMSLEVTV LLTHGDIQVASAAAPAERAWPVHSGTLRALSGWLGAFEASWDTGAGRGNPIDLDLCTRCNACIEACPENAIDFSYQIDMD RCRAHRDCVRACGAAAAIDFDRPAAVAGGRFDLVFDLNDTPAFTMHQPPQGYLHAGGAALRQQQQALALTQLVGEFEKPK FFRYKESLCAHGRNQTTGCTACIDICSTQAIRSQWHDGKGRIEVTPNLCMGCGACTTVCPSGAISYAYPGPEVLGTRLRT LLSAYRSAGGRDAVVLLHGDEAGTPAILALGRAARAGLAQGVPPNVMPVQVFHPASAGLELWLAALCWGAAHVAILLTGD EAPQYRTALQEQIDVARALLGGLGYKAGAVSLVEAADASSLDAGLAALRPARHALPPAPFGAVAAKREMFDFALDHLMRH APVPADIVPLPSAAPIGAVVVDTASCTLCMACAGACPTQALRDNPERPVLGFLERNCVQCGLCEKTCPEHAITLVPRLLT GEAARRNVTLNESQPFHCVRCAKPFGTAQMVESMLVRLAGHPAFAGAAAERLKMCPDCRVVDMMERDPGAISGATLR >Mature_716_residues PTLICSCNETMPLDGAALSQAHGGPLKVHRLLCRREIGDFMAALDGTDDVIVACTQERHLFAEVAAQAARGDNGRPVVVA PVRFVNIRETGGWSQGAKRDPKTANAKIAALLAVAALPEPDPVPVVDYRSDGSVLVMGPPDRALPWAERLAAMSLEVTVL LTHGDIQVASAAAPAERAWPVHSGTLRALSGWLGAFEASWDTGAGRGNPIDLDLCTRCNACIEACPENAIDFSYQIDMDR CRAHRDCVRACGAAAAIDFDRPAAVAGGRFDLVFDLNDTPAFTMHQPPQGYLHAGGAALRQQQQALALTQLVGEFEKPKF FRYKESLCAHGRNQTTGCTACIDICSTQAIRSQWHDGKGRIEVTPNLCMGCGACTTVCPSGAISYAYPGPEVLGTRLRTL LSAYRSAGGRDAVVLLHGDEAGTPAILALGRAARAGLAQGVPPNVMPVQVFHPASAGLELWLAALCWGAAHVAILLTGDE APQYRTALQEQIDVARALLGGLGYKAGAVSLVEAADASSLDAGLAALRPARHALPPAPFGAVAAKREMFDFALDHLMRHA PVPADIVPLPSAAPIGAVVVDTASCTLCMACAGACPTQALRDNPERPVLGFLERNCVQCGLCEKTCPEHAITLVPRLLTG EAARRNVTLNESQPFHCVRCAKPFGTAQMVESMLVRLAGHPAFAGAAAERLKMCPDCRVVDMMERDPGAISGATLR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75671; Mature: 75539
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLICSCNETMPLDGAALSQAHGGPLKVHRLLCRREIGDFMAALDGTDDVIVACTQERH CCCEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH LFAEVAAQAARGDNGRPVVVAPVRFVNIRETGGWSQGAKRDPKTANAKIAALLAVAALPE HHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PDPVPVVDYRSDGSVLVMGPPDRALPWAERLAAMSLEVTVLLTHGDIQVASAAAPAERAW CCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHEEEEEEEEEECCEEEECCCCCHHHCC PVHSGTLRALSGWLGAFEASWDTGAGRGNPIDLDLCTRCNACIEACPENAIDFSYQIDMD CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHH RCRAHRDCVRACGAAAAIDFDRPAAVAGGRFDLVFDLNDTPAFTMHQPPQGYLHAGGAAL HHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCEECCCHHH RQQQQALALTQLVGEFEKPKFFRYKESLCAHGRNQTTGCTACIDICSTQAIRSQWHDGKG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RIEVTPNLCMGCGACTTVCPSGAISYAYPGPEVLGTRLRTLLSAYRSAGGRDAVVLLHGD EEEECCHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC EAGTPAILALGRAARAGLAQGVPPNVMPVQVFHPASAGLELWLAALCWGAAHVAILLTGD CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEECC EAPQYRTALQEQIDVARALLGGLGYKAGAVSLVEAADASSLDAGLAALRPARHALPPAPF CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCC GAVAAKREMFDFALDHLMRHAPVPADIVPLPSAAPIGAVVVDTASCTLCMACAGACPTQA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHH LRDNPERPVLGFLERNCVQCGLCEKTCPEHAITLVPRLLTGEAARRNVTLNESQPFHCVR HHCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCHHHHCCEEECCCCCCEEEE CAKPFGTAQMVESMLVRLAGHPAFAGAAAERLKMCPDCRVVDMMERDPGAISGATLR CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCC >Mature Secondary Structure PTLICSCNETMPLDGAALSQAHGGPLKVHRLLCRREIGDFMAALDGTDDVIVACTQERH CCEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH LFAEVAAQAARGDNGRPVVVAPVRFVNIRETGGWSQGAKRDPKTANAKIAALLAVAALPE HHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC PDPVPVVDYRSDGSVLVMGPPDRALPWAERLAAMSLEVTVLLTHGDIQVASAAAPAERAW CCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHEEEEEEEEEECCEEEECCCCCHHHCC PVHSGTLRALSGWLGAFEASWDTGAGRGNPIDLDLCTRCNACIEACPENAIDFSYQIDMD CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHH RCRAHRDCVRACGAAAAIDFDRPAAVAGGRFDLVFDLNDTPAFTMHQPPQGYLHAGGAAL HHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCEECCCHHH RQQQQALALTQLVGEFEKPKFFRYKESLCAHGRNQTTGCTACIDICSTQAIRSQWHDGKG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC RIEVTPNLCMGCGACTTVCPSGAISYAYPGPEVLGTRLRTLLSAYRSAGGRDAVVLLHGD EEEECCHHHHCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC EAGTPAILALGRAARAGLAQGVPPNVMPVQVFHPASAGLELWLAALCWGAAHVAILLTGD CCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEEECC EAPQYRTALQEQIDVARALLGGLGYKAGAVSLVEAADASSLDAGLAALRPARHALPPAPF CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCC GAVAAKREMFDFALDHLMRHAPVPADIVPLPSAAPIGAVVVDTASCTLCMACAGACPTQA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHH LRDNPERPVLGFLERNCVQCGLCEKTCPEHAITLVPRLLTGEAARRNVTLNESQPFHCVR HHCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHCCHHHHCCEEECCCCCCEEEE CAKPFGTAQMVESMLVRLAGHPAFAGAAAERLKMCPDCRVVDMMERDPGAISGATLR CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA