Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is metG [H]
Identifier: 73540380
GI number: 73540380
Start: 725582
End: 727648
Strand: Reverse
Name: metG [H]
Synonym: Reut_A0674
Alternate gene names: 73540380
Gene position: 727648-725582 (Counterclockwise)
Preceding gene: 73540381
Following gene: 73540376
Centisome position: 19.12
GC content: 63.13
Gene sequence:
>2067_bases ATGACCGCACGTCGTATCCTCGTCACATCTGCCCTGCCATATGCCAACGGCCAGATTCATATCGGCCACCTGGTGGAGTA CATCCAGACCGACATCTGGGTGCGCTTCCAGCGCATGATGGGCAACGAGGTTTACTACGTCGGCGCCGACGACACCCACG GTACGCCGGTCATGCTGCGCGCCGAGAAGGAAGGCATCACGCCCAAGCAACTGATCGACCGCGTCTGGACCGAGCACAAG CGCGACTTCGACAGCTTCCTGGTGTCGTTCGACAACTACTACAGCACCGACGCGGAGGAAAACCGCGAGCTGTGCGAAAA GATCTACCTGGCCCTGAAGGCCGACGACCTGATCGCCGAACGCGAAGTCGAACAGTTCTACGACCCGGTCAAGAACATGT TCCTGCCGGACCGCTTCATCAAGGGCGAGTGCCCGAAGTGCGGTGCAAAGGATCAGTACGGGGACTCGTGTGAAGTCTGC GGCACCACCTATGTGCCGACCGACCTGAAGAATCCGTACTCGGTCGTCTCGGGCGCCACGCCGGTGCGCAAGTCGTCGAC GCACTTCTTCTTCAAGCTGTCCGACCCGCGCTGCGAAACCTTCCTGCGCGAGTGGGTGGCCGATCTGGCCCAGCCCGAAG CCGCCAACAAGATGCAGGAATGGCTCGGCAGCGAAGGCGAAGCCTCGACGCTGTCGGACTGGGACATCTCGCGCGACGCG CCGTACTTCGGCTTCGAGATCCCGGGCGCACCGGGCAAGTACTTCTATGTGTGGCTGGACGCCCCGATCGGCTACTACGC AAGCTTCAAGAACCTGGCCGAGAAGAAAGGCATCGACTTCGACGCATGGGTCGGCCCGCACTCCACGGCCGAGCAGTACC ACTTCATCGGCAAGGACATCCTGTACTTCCACACGCTGTTCTGGCCGGCCATGCTGCGCTTCTCGGGCTACCGCACGCCG ACCAACGTGTTCGCGCACGGCTTCCTGACCGTGGATGGCGCCAAGATGAGCAAGTCACGCGGCACGTTCATCACCGCGCA GAGCTACATCGACACCGGCATGAACCCGGAATGGCTGCGCTACTATTTCGCCGCCAAGCTCAACGCGAGCATGGAAGACC TGGACCTGAACCTGGACGACTTTATCGCTCGCGTCAACAGCGACCTGATCGGCAAGTACGTCAACATCGCGAGCCGCGCG GCGGGCTTCCTGGTCAAGCGCTTCGAAGGCAAGGTCGACGAAGCCGCGCTGGCGCACCCGCTGCTCAAGCAACTGCGCGA AGCCGCGCCGCAAGTCGCGCAGCTCTATGAAGCACGCGAGTACAGCAAGGCGCTGCGCCTGGTGATGGAGCTGACCGACA CGGTCAATGCGTTCGTCGATACCGAAAAGCCGTGGGAACTGGCGAAGGATGAAGCCAAGCGCAGTGCGCTGCATGCCGCA TGCTCGGTGTCGCTCGAGGCCTTCCGTCTGCTGACGGTCTATCTGAAGCCCGTGGTACCGACCGTGGCCGCCGGCGTGGA GCGCTTCCTCAATGTCGAGCCGCTGGACTGGCGCGCGATCGACAAGCAGCTGTCGGCTTCCAGCCCGGTGCAGGCGTACC AGCACCTGATGACGCGCGTCGATGCCAAGCAGGTCGATGCGCTGCTGGCCGCCAACCGGGAATCGCTGCAGGCGACGGCG CCCGCCGCCGGCGCGGCAGCGGCCGCTTCGATCGAGCCGATCGCCGACACCATCACGATCGACGACTTCGCGAAGATCGA TCTGCGGGTTGCCAAGATTGTGGAATGCCAGAAGGTCGAAGGCTCCAGCAAGTTGCTGCAGCTGACGCTGGACCTTGGCG AAGGCCGTACGCGCAATGTGTTCTCCGGCATCCAGTCGGCCTACACGCCGGAGCAGCTTGTCGGCAAGCTGACCGTGGTG GTTGCCAACCTGGCACCGCGCAAGATGAAGTTTGGCGTATCCGAAGGGATGGTGCTGGCTGCTTCGGCCGCTGATGAGAA GGCCAATCCGGGGCTCTACATCCTGGAGCCGCACAGCGGTGCGGTGCCCGGCATGCGGATCGGCTGA
Upstream 100 bases:
>100_bases GCGACGCGGTGCTTGCTAAAATAGCCCTTTCGCATTTCGCGCCCGGCTCAGCCGCACACGCGCGGGCGCACGCCTCCCGT CACCACCACTGGCTCTTTTT
Downstream 100 bases:
>100_bases TCTGCCTGCACGACAGGAAAAAAACGGCGGCGCCCTCCAGGCAGCCGCCGTTTTTCTTTATCGCCTCGGAGCTATCACCC GCCCTGCATGCGAGAAGGAT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKEGITPKQLIDRVWTEHK RDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVC GTTYVPTDLKNPYSVVSGATPVRKSSTHFFFKLSDPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDA PYFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILYFHTLFWPAMLRFSGYRTP TNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYYFAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRA AGFLVKRFEGKVDEAALAHPLLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALHAA CSVSLEAFRLLTVYLKPVVPTVAAGVERFLNVEPLDWRAIDKQLSASSPVQAYQHLMTRVDAKQVDALLAANRESLQATA PAAGAAAAASIEPIADTITIDDFAKIDLRVAKIVECQKVEGSSKLLQLTLDLGEGRTRNVFSGIQSAYTPEQLVGKLTVV VANLAPRKMKFGVSEGMVLAASAADEKANPGLYILEPHSGAVPGMRIG
Sequences:
>Translated_688_residues MTARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKEGITPKQLIDRVWTEHK RDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVC GTTYVPTDLKNPYSVVSGATPVRKSSTHFFFKLSDPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDA PYFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILYFHTLFWPAMLRFSGYRTP TNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYYFAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRA AGFLVKRFEGKVDEAALAHPLLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALHAA CSVSLEAFRLLTVYLKPVVPTVAAGVERFLNVEPLDWRAIDKQLSASSPVQAYQHLMTRVDAKQVDALLAANRESLQATA PAAGAAAAASIEPIADTITIDDFAKIDLRVAKIVECQKVEGSSKLLQLTLDLGEGRTRNVFSGIQSAYTPEQLVGKLTVV VANLAPRKMKFGVSEGMVLAASAADEKANPGLYILEPHSGAVPGMRIG >Mature_687_residues TARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKEGITPKQLIDRVWTEHKR DFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAEREVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCG TTYVPTDLKNPYSVVSGATPVRKSSTHFFFKLSDPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDAP YFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDILYFHTLFWPAMLRFSGYRTPT NVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLRYYFAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAA GFLVKRFEGKVDEAALAHPLLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALHAAC SVSLEAFRLLTVYLKPVVPTVAAGVERFLNVEPLDWRAIDKQLSASSPVQAYQHLMTRVDAKQVDALLAANRESLQATAP AAGAAAAASIEPIADTITIDDFAKIDLRVAKIVECQKVEGSSKLLQLTLDLGEGRTRNVFSGIQSAYTPEQLVGKLTVVV ANLAPRKMKFGVSEGMVLAASAADEKANPGLYILEPHSGAVPGMRIG
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI14043022, Length=524, Percent_Identity=28.8167938931298, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI24308436, Length=533, Percent_Identity=25.515947467167, Blast_Score=140, Evalue=3e-33, Organism=Escherichia coli, GI1788432, Length=692, Percent_Identity=54.3352601156069, Blast_Score=753, Evalue=0.0, Organism=Escherichia coli, GI1789455, Length=112, Percent_Identity=33.0357142857143, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17540794, Length=520, Percent_Identity=28.6538461538462, Blast_Score=236, Evalue=4e-62, Organism=Caenorhabditis elegans, GI212645096, Length=529, Percent_Identity=24.007561436673, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI71992781, Length=331, Percent_Identity=25.6797583081571, Blast_Score=110, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6321704, Length=557, Percent_Identity=27.1095152603232, Blast_Score=226, Evalue=8e-60, Organism=Saccharomyces cerevisiae, GI6321610, Length=544, Percent_Identity=23.7132352941176, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24655311, Length=538, Percent_Identity=29.368029739777, Blast_Score=209, Evalue=5e-54, Organism=Drosophila melanogaster, GI21358483, Length=521, Percent_Identity=25.9117082533589, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24651924, Length=103, Percent_Identity=37.8640776699029, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 [H]
Pfam domain/function: PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 76734; Mature: 76603
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLR CCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEE AEKEGITPKQLIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAE ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH REVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGAT HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC PVRKSSTHFFFKLSDPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDA CCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PYFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDI CCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLR HHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCCCEEEEHHHHCCCCCHHHHH YYFAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKVDEAALAHP HHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALHAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH CSVSLEAFRLLTVYLKPVVPTVAAGVERFLNVEPLDWRAIDKQLSASSPVQAYQHLMTRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH DAKQVDALLAANRESLQATAPAAGAAAAASIEPIADTITIDDFAKIDLRVAKIVECQKVE CHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCHHHHEEEECCHHHHHHHHHHHHHHHHCC GSSKLLQLTLDLGEGRTRNVFSGIQSAYTPEQLVGKLTVVVANLAPRKMKFGVSEGMVLA CCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEE ASAADEKANPGLYILEPHSGAVPGMRIG EECCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLR CCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEE AEKEGITPKQLIDRVWTEHKRDFDSFLVSFDNYYSTDAEENRELCEKIYLALKADDLIAE ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH REVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGAT HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC PVRKSSTHFFFKLSDPRCETFLREWVADLAQPEAANKMQEWLGSEGEASTLSDWDISRDA CCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PYFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKKGIDFDAWVGPHSTAEQYHFIGKDI CCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH LYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGMNPEWLR HHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCCCEEEEHHHHCCCCCHHHHH YYFAAKLNASMEDLDLNLDDFIARVNSDLIGKYVNIASRAAGFLVKRFEGKVDEAALAHP HHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LLKQLREAAPQVAQLYEAREYSKALRLVMELTDTVNAFVDTEKPWELAKDEAKRSALHAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH CSVSLEAFRLLTVYLKPVVPTVAAGVERFLNVEPLDWRAIDKQLSASSPVQAYQHLMTRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH DAKQVDALLAANRESLQATAPAAGAAAAASIEPIADTITIDDFAKIDLRVAKIVECQKVE CHHHHHHHHHCCHHHHHCCCCCCCHHHHCCCCHHHHEEEECCHHHHHHHHHHHHHHHHCC GSSKLLQLTLDLGEGRTRNVFSGIQSAYTPEQLVGKLTVVVANLAPRKMKFGVSEGMVLA CCCEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEE ASAADEKANPGLYILEPHSGAVPGMRIG EECCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA