| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yfgC [C]
Identifier: 73540348
GI number: 73540348
Start: 689760
End: 690803
Strand: Reverse
Name: yfgC [C]
Synonym: Reut_A0642
Alternate gene names: 73540348
Gene position: 690803-689760 (Counterclockwise)
Preceding gene: 73540349
Following gene: 73540345
Centisome position: 18.15
GC content: 69.16
Gene sequence:
>1044_bases ATGATTCCTGTCACCTACTTCGACGGCCGCTCGTCGCGGGCGCACCCGGCAACGCTTGCTGTGGATGCGGGCCAGGCCGT ACTGCGCGATGCCGATGGCGCCGAACTGCGGCGCGCTTCGCTGTCGTCGCTGCGAGTATCGGAGCGGGTCCGGCGCGCCC CGCGGCTCGTGACGTTCGCGGACGGCGCGTTCTGCCAGGTCAGCGACCACGCCGCATTCGACCGGCTGCTGGCCGATACG GGACATCAGGAAGGCTGGGTGGCCCGGGCGCAGAACAGCTGGCGCATGGCGGGCATGGCCGTGGCCGCACTGGTGGCTGT GCTCGTGCTCGGCTACTACGTGCTGCTGCCGTGGAGCGCGGCCCATATGGCGCGCGCCGTGCCGCCCGCGCTGGAAGCGC AGCTTGGCCGTGCGACACTGGCCAGCCTCGACAACGGTCTGGTCGATCCGACCCGCGTGCCGCCTGCCGAACAGGCACGC ATCCGTACGGGCTTCGCGTCGCTGAAGCGGCCAGAGGATCCCGGCCATGACTACCAGATCGTGTTCCGGCGCGGCGGACG CCTGGGCGCCAATGCGCTGGCCTTGCCCGGCGGCACCATCGTTGTGACGGACGAACTCGTGGGGATCGCCGGCACGGGCG CCGGCATGCTGGGCGTGCTCGCCCACGAGGCTGGCCATATCGCGCAGCGCCATGGTCTGCAGCAGGTTATCCAGGCGTCG GCGGTCGGCGCGCTGGCAGCGTATATGTTCGGGGATTTTTCGTCCGTGCTGGCAGGCGTGCCTGCCGCCATGCTGACGCT GCGCTATTCGCGCGAGCACGAACGCGAGGCCGATGCCTATGCGATCGAGATCATGCAGCGCAACCGGCTGCCGCCATCGG CGCTCGCCGATGTGCTGGTCGCGCTCGAGAACCAAAACCGCAGTGGGGACAAGAAAGAAGCCCCACCGCGTGCTCATGAG GAAGAACCCCCGCTGGACGATTTCCTCTCGACGCATCCGCACACGCGCGAACGGATCGAGGCACTGCGCGCCGCAGGCTC CTGA
Upstream 100 bases:
>100_bases CGCTGGGCGATGCTGCCGCGGACTGGTACGACATCGACATCGCGCTCTGAGCCCGCGTTCGTCGCCGTGGCCGAAATGAC TCACCGATGAAATTGCGCCG
Downstream 100 bases:
>100_bases CCGCGCGCGGGCGCGCTTTCAGGCGCCCGAATCGGTCACGGGGCGCTCCTCACCGGAACGCGCCTGCCGGCGATAGGCCC ACACCACCATCGCGATGCCG
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Zn-Dependent Protease; M48 Family Peptidase; Metalloendopeptidase; TPR Repeat-Containing Zn-Dependent Protease; Zinc Metalloprotease With Chaperone Function; Zinc Dependent Protease; Metalloprotease Protein; Zinc Metalloendopeptidase; M48 Peptidase Family Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFADGAFCQVSDHAAFDRLLADT GHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSAAHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQAR IRTGFASLKRPEDPGHDYQIVFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLVALENQNRSGDKKEAPPRAHE EEPPLDDFLSTHPHTRERIEALRAAGS
Sequences:
>Translated_347_residues MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFADGAFCQVSDHAAFDRLLADT GHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSAAHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQAR IRTGFASLKRPEDPGHDYQIVFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLVALENQNRSGDKKEAPPRAHE EEPPLDDFLSTHPHTRERIEALRAAGS >Mature_347_residues MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFADGAFCQVSDHAAFDRLLADT GHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSAAHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQAR IRTGFASLKRPEDPGHDYQIVFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLVALENQNRSGDKKEAPPRAHE EEPPLDDFLSTHPHTRERIEALRAAGS
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37126; Mature: 37126
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFA CCEEEEECCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC DGAFCQVSDHAAFDRLLADTGHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSA CCCEEEECCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQARIRTGFASLKRPEDPGHDYQI HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE VFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS EEECCCCCCCCEEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALENQNRSGDKKEAPPRAHEEEPPLDDFLSTHPHTRERIEALRAAGS HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MIPVTYFDGRSSRAHPATLAVDAGQAVLRDADGAELRRASLSSLRVSERVRRAPRLVTFA CCEEEEECCCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEC DGAFCQVSDHAAFDRLLADTGHQEGWVARAQNSWRMAGMAVAALVAVLVLGYYVLLPWSA CCCEEEECCHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AHMARAVPPALEAQLGRATLASLDNGLVDPTRVPPAEQARIRTGFASLKRPEDPGHDYQI HHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEE VFRRGGRLGANALALPGGTIVVTDELVGIAGTGAGMLGVLAHEAGHIAQRHGLQQVIQAS EEECCCCCCCCEEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AVGALAAYMFGDFSSVLAGVPAAMLTLRYSREHEREADAYAIEIMQRNRLPPSALADVLV HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALENQNRSGDKKEAPPRAHEEEPPLDDFLSTHPHTRERIEALRAAGS HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA