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The map label for this gene is ycaR [C]

Identifier: 73540298

GI number: 73540298

Start: 643451

End: 643654

Strand: Reverse

Name: ycaR [C]

Synonym: Reut_A0592

Alternate gene names: 73540298

Gene position: 643654-643451 (Counterclockwise)

Preceding gene: 73540299

Following gene: 73540297

Centisome position: 16.91

GC content: 67.16

Gene sequence:

>204_bases
ATGGACAACCGGCTGCTTGAAATCCTGGTCTGCCCGCTTTGCAAGGGCAAGCTGGAATACGACCGCGCCGCGCAGGAACT
GATCTGCCACGCGGACAAGCTCGCCTACCCGATCCGCGACGGCATTCCCGTCATGCTGGCCGACGAGGCCCGGCAATCGG
TGCCAGGGCGCGTGATCGACCCGGCCGCGCCGCGGACGGAGTGA

Upstream 100 bases:

>100_bases
CTGATCGACAAGATCCGACGCGCCGTGCTGGCGCGCGTACCGGCCGCAAAGAGCACGCCCGCATCGGGCGGCGCCACGGG
CCTCAACAAGGAACACCAAG

Downstream 100 bases:

>100_bases
GGCGCGCATCATGAGCATCCCGGCCTTCACTGTCGTCATTCCGGCGCGGCTGGCTTCCACGCGGCTGCCGAACAAGCCGC
TGGCCGATATCGGTGGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MDNRLLEILVCPLCKGKLEYDRAAQELICHADKLAYPIRDGIPVMLADEARQSVPGRVIDPAAPRTE

Sequences:

>Translated_67_residues
MDNRLLEILVCPLCKGKLEYDRAAQELICHADKLAYPIRDGIPVMLADEARQSVPGRVIDPAAPRTE
>Mature_67_residues
MDNRLLEILVCPLCKGKLEYDRAAQELICHADKLAYPIRDGIPVMLADEARQSVPGRVIDPAAPRTE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=51, Percent_Identity=64.7058823529412, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y592_CUPPJ (Q475F9)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_294818.1
- ProteinModelPortal:   Q475F9
- SMR:   Q475F9
- GeneID:   3610776
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A0592
- NMPDR:   fig|264198.3.peg.1104
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK897353
- BioCyc:   REUT264198:REUT_A0592-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7460; Mature: 7460

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRLLEILVCPLCKGKLEYDRAAQELICHADKLAYPIRDGIPVMLADEARQSVPGRVID
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCEEC
PAAPRTE
CCCCCCC
>Mature Secondary Structure
MDNRLLEILVCPLCKGKLEYDRAAQELICHADKLAYPIRDGIPVMLADEARQSVPGRVID
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHCCCCCEEC
PAAPRTE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA