| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is gmhB [H]
Identifier: 73540212
GI number: 73540212
Start: 549395
End: 549973
Strand: Reverse
Name: gmhB [H]
Synonym: Reut_A0506
Alternate gene names: 73540212
Gene position: 549973-549395 (Counterclockwise)
Preceding gene: 73540213
Following gene: 73540211
Centisome position: 14.45
GC content: 66.84
Gene sequence:
>579_bases ATGCCACAGACACCGCCCAAATTCGTCGTGCTTGATCGCGACGGGGTCATCAACCTTGACAGCGACCAGTTCGTCAAATC GCCCGACGAATGGGTGCCGATCGAAGGCAGCCTCGAAGCCATCGCCGCGATGAACCAGGCGGGCTACCGCGTGGTGGTCG CCAGCAACCAGTCGGGCATCGGCCGCGGCCTGTTCGAGATGAGCGCGCTCAACGCCATGCACGAGAAGATGTACAAGGCG CTGGCCCATCTCGGCGGGCGTGTGGACGCGGTCTTCTTCTGCCCGCATACCGCGGCCGACAGTTGCGATTGCCGCAAGCC CAAACCCGGCCTGCTCGACCAGATCAGCGAACGGTTCGGCATCGAACTCAAGGGCGTGCCGATCGTCGGCGACTCGCTGC GCGACCTGGAGGCCGGTGTGGCGGTCGGCTGCACGCCGCACCTGGTGCTCACCGGCAAGGGCCAGAAGACGCTGGACAAG GGCGGCCTGCCCCCGGGCACACGCGTCCATGACGACCTGCGCGCGTTCGCACGCTGGCTGTCCGGCGGCGATGGCCAGCC CCGCACAAGTTCGTCCTGA
Upstream 100 bases:
>100_bases GGCGCTGCTGGCCTCGCTGCACGCGCTGGCCAACCGCGTGGCGGACATCTCGAAGCTGGCGGCCTGATCGCCACGCCACC ACGCCAACCGGGAGCCAGAC
Downstream 100 bases:
>100_bases TTCCCGCTGCTTCGCCAGTCATCTCTCAAGCGCCCCCCGATGATCTTTTTGCGTTCCTTTCTGTTCGCGCTGTACCTGCT GGTGCTGACGCCGCCCTATG
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPQTPPKFVVLDRDGVINLDSDQFVKSPDEWVPIEGSLEAIAAMNQAGYRVVVASNQSGIGRGLFEMSALNAMHEKMYKA LAHLGGRVDAVFFCPHTAADSCDCRKPKPGLLDQISERFGIELKGVPIVGDSLRDLEAGVAVGCTPHLVLTGKGQKTLDK GGLPPGTRVHDDLRAFARWLSGGDGQPRTSSS
Sequences:
>Translated_192_residues MPQTPPKFVVLDRDGVINLDSDQFVKSPDEWVPIEGSLEAIAAMNQAGYRVVVASNQSGIGRGLFEMSALNAMHEKMYKA LAHLGGRVDAVFFCPHTAADSCDCRKPKPGLLDQISERFGIELKGVPIVGDSLRDLEAGVAVGCTPHLVLTGKGQKTLDK GGLPPGTRVHDDLRAFARWLSGGDGQPRTSSS >Mature_191_residues PQTPPKFVVLDRDGVINLDSDQFVKSPDEWVPIEGSLEAIAAMNQAGYRVVVASNQSGIGRGLFEMSALNAMHEKMYKAL AHLGGRVDAVFFCPHTAADSCDCRKPKPGLLDQISERFGIELKGVPIVGDSLRDLEAGVAVGCTPHLVLTGKGQKTLDKG GLPPGTRVHDDLRAFARWLSGGDGQPRTSSS
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=153, Percent_Identity=37.2549019607843, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI87082027, Length=141, Percent_Identity=29.7872340425532, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 20524; Mature: 20392
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQTPPKFVVLDRDGVINLDSDQFVKSPDEWVPIEGSLEAIAAMNQAGYRVVVASNQSGI CCCCCCCEEEECCCCEEECCCCHHHCCCCCEECCCCCHHHHHHHCCCCEEEEEECCCCCC GRGLFEMSALNAMHEKMYKALAHLGGRVDAVFFCPHTAADSCDCRKPKPGLLDQISERFG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC IELKGVPIVGDSLRDLEAGVAVGCTPHLVLTGKGQKTLDKGGLPPGTRVHDDLRAFARWL CEECCCEEECCCHHHHHCCEEECCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHH SGGDGQPRTSSS CCCCCCCCCCCC >Mature Secondary Structure PQTPPKFVVLDRDGVINLDSDQFVKSPDEWVPIEGSLEAIAAMNQAGYRVVVASNQSGI CCCCCCEEEECCCCEEECCCCHHHCCCCCEECCCCCHHHHHHHCCCCEEEEEECCCCCC GRGLFEMSALNAMHEKMYKALAHLGGRVDAVFFCPHTAADSCDCRKPKPGLLDQISERFG CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHC IELKGVPIVGDSLRDLEAGVAVGCTPHLVLTGKGQKTLDKGGLPPGTRVHDDLRAFARWL CEECCCEEECCCHHHHHCCEEECCCCEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHH SGGDGQPRTSSS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919; 12101286 [H]