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The map label for this gene is yebA [C]

Identifier: 73540181

GI number: 73540181

Start: 518792

End: 520186

Strand: Reverse

Name: yebA [C]

Synonym: Reut_A0475

Alternate gene names: 73540181

Gene position: 520186-518792 (Counterclockwise)

Preceding gene: 73540186

Following gene: 73540180

Centisome position: 13.67

GC content: 64.87

Gene sequence:

>1395_bases
ATGTGGTCCAGACTCCGCGAAGTTTTCGCGCGCGAGCTGGTGGTTCTCGTCGACCCGACCAACCCCCAGCACGCGCGACG
GCGCAAACAACTCACCGCTTCGGTGGGTGCAATTTTCACGCTCGGCATGGCCGCCGCCATGGGCGTGGCGCCGCGCAGCG
CCTTCAATGACCCGCTTGCGCCGCGCGTCAACGAGCCGCTGCGCATGCCCGATGTGCGCGAACAGCTCGAACAGATTTCC
GATATCGATACCGATGCCGTCTACGTGCGCCAGGAGCGCATGCAGCGCGGCGACACCATCGGCTCGCTGCTGCGCCGCCT
TGGCGTGGACGATCCCGATGCGCAGGCCTTCATCCTGAAGAACCCGACCGCGCGCGGCCTGTTCAACGTCAATCCCGGTC
AGGCCGTGCAGGCGGAGATCGACGACAGCAATATGCTGGTCTCGCTGCAGGCCAACCTGGGCGGCAATGCCGCGACTTCG
CGCGAACTCGTGATCGAGCGGGTCGAGCCGGCAAAGGCCGGTGGCACGACCACCTACAAGGCGCGCGTGCAGAACGTCGA
CAACGACCTGCGCTATGAAATGGCGTCCGGCTCGATTTCGTCCGGCGGCTTCTTCAAGGCCATGGATGCGGCCAATGTGC
CCGACGACATCGTGCAGCAGATGCTGTCGATCTTCTCCGGCGTCATCGACTTCCAGCATGACATCGCCAGCGGCGACCGC
TTCCGCATCATCTACGAAGCAGGCTTCCAGGATGGCGCGTTCATCCGCAACGGCCGCGTGGTGGCGATCGAACTGATCAA
CCGCAACCAACTCCACCAGGCGCTGTGGTTCGCACCGGAAGGCGAGAGCAACGGCGCCTACTACACGTTCGACGGCCGCA
GCATGAAGCGCCCGTTCCTGCGTTCGCCGGTGGAATTCTCGCGCGTGTCGTCGGGCTTCGGCGGCCGCGAGCATCCGCTG
CACCATGCGTGGGCCCAGCACAAGGGCGTGGACTTCGCCGCGCCCACGGGCACCAAGGTGCTGGCGACCGGTGAAGGCAC
GATCGACTTTGTCGGGCAGCAGAACGGCTACGGCAACATCATCATCCTGAAGCACGCGAACGGCTACTCGACCTACTACG
CACACCTCTCCGGCTTTGCGGGCGTGCAGCAGGGCCAGCGTGTCACGCAGGGTCAGGTCATCGGCTATGTCGGCCAGACC
GGCTGGGCCACCGGGCCGCACCTGCACTACGAGTTCCGCTTCAACGACGTGCCGCAGAACCCGTTGAGCATCGCGCTGAT
GGAAGCGCCGGTGCTGACCGGCAAGGCGCGCCAGGAATTCTTGGGCTATACCAGCGAAATGCTCGGCCGCATCAACGCGC
TGCGCACCTATAACGTTCTTACCGCGGCCAACTGA

Upstream 100 bases:

>100_bases
CAAATAAAGATGAACAGCCCGCGCCGCACCTCGGGGGAGGAAGGCAGACGACACACATCGTCGCGGCAGCGGTGCCCAGA
CCAAGGTTGAATTTTACGTG

Downstream 100 bases:

>100_bases
CAGCCGCTCCGCCCGGAGACTCCATGCGCGCGCAAGGCGACCGCTATATCGGCATCATGTCTGGCACCAGCATGGACGGC
GCGGACGCCGTGCTGGTGGA

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLAPRVNEPLRMPDVREQLEQIS
DIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILKNPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATS
RELVIERVEPAKAGGTTTYKARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR
FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGREHPL
HHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNIIILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQT
GWATGPHLHYEFRFNDVPQNPLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN

Sequences:

>Translated_464_residues
MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLAPRVNEPLRMPDVREQLEQIS
DIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILKNPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATS
RELVIERVEPAKAGGTTTYKARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR
FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGREHPL
HHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNIIILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQT
GWATGPHLHYEFRFNDVPQNPLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN
>Mature_464_residues
MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLAPRVNEPLRMPDVREQLEQIS
DIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILKNPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATS
RELVIERVEPAKAGGTTTYKARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR
FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFLRSPVEFSRVSSGFGGREHPL
HHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNIIILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQT
GWATGPHLHYEFRFNDVPQNPLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=395, Percent_Identity=26.5822784810127, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87082174, Length=105, Percent_Identity=40, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789099, Length=123, Percent_Identity=35.7723577235772, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 50975; Mature: 50975

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLA
CHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
PRVNEPLRMPDVREQLEQISDIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILK
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEE
NPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATSRELVIERVEPAKAGGTTTYK
CCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
ARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR
HEECCCCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFL
EEEEEECCCCCCCEEECCCEEEEEECCCHHHHHHHEECCCCCCCCEEEEECCCCCCCCHH
RSPVEFSRVSSGFGGREHPLHHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNI
CCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEECCCCCEEEEECCCCEEEEECCCCCCCE
IILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQTGWATGPHLHYEFRFNDVPQN
EEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC
PLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECC
>Mature Secondary Structure
MWSRLREVFARELVVLVDPTNPQHARRRKQLTASVGAIFTLGMAAAMGVAPRSAFNDPLA
CHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC
PRVNEPLRMPDVREQLEQISDIDTDAVYVRQERMQRGDTIGSLLRRLGVDDPDAQAFILK
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEE
NPTARGLFNVNPGQAVQAEIDDSNMLVSLQANLGGNAATSRELVIERVEPAKAGGTTTYK
CCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEE
ARVQNVDNDLRYEMASGSISSGGFFKAMDAANVPDDIVQQMLSIFSGVIDFQHDIASGDR
HEECCCCCCCEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
FRIIYEAGFQDGAFIRNGRVVAIELINRNQLHQALWFAPEGESNGAYYTFDGRSMKRPFL
EEEEEECCCCCCCEEECCCEEEEEECCCHHHHHHHEECCCCCCCCEEEEECCCCCCCCHH
RSPVEFSRVSSGFGGREHPLHHAWAQHKGVDFAAPTGTKVLATGEGTIDFVGQQNGYGNI
CCCCHHHHHHCCCCCCCCCHHHHHHHHCCCCEECCCCCEEEEECCCCEEEEECCCCCCCE
IILKHANGYSTYYAHLSGFAGVQQGQRVTQGQVIGYVGQTGWATGPHLHYEFRFNDVPQN
EEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCC
PLSIALMEAPVLTGKARQEFLGYTSEMLGRINALRTYNVLTAAN
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]