Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is ttuD [H]
Identifier: 73540169
GI number: 73540169
Start: 508941
End: 510254
Strand: Direct
Name: ttuD [H]
Synonym: Reut_A0463
Alternate gene names: 73540169
Gene position: 508941-510254 (Clockwise)
Preceding gene: 73540168
Following gene: 73540170
Centisome position: 13.37
GC content: 68.49
Gene sequence:
>1314_bases GTGAGCGCGCCGGGGAGTTTCACGGGCGATCCGCGCGCGCTGCTGCTCGAGACGTTCCAGGCGGCGGTGGCGGCGGCGGA TCCGCTGAAGATCGTGGCCGAGTACTTGCCGCCGCCACAGCCGGGAGGGCGTACGCTGGTCGTGGGCGCGGGCAAGGCCG CGGCGTCGATGGCGCTGGCGGCGGAGCAAGCCTATGCCGGCAAGGCGCAGGTCGAAGGGCTGGTCGTCACGCGCTACGCG CATGGCCTGCCCACACAGCACGTGCGCGTGATCGAGGCCGGCCATCCCGTTCCTGATGAGGCGGGCGAGCAGGCCGCAGC GGACATTCTGACCAGCGTGTCATCGCTGACGCCCGCGGACCGCCTGCTGGTGCTGGTGTCCGGCGGCGGATCGAGCCTGC TGTCGCTGCCTGCCGAAGGTATTCCAATGGCGGACCTCAAGGCCACCACGAAGGAACTGCTGCGCTGCGGGGCGCCGATC ACAGAGATGAATATCGTGCGCAAGCACATCTCGCGCATCCAGGGCGGGCGTCTGGCGCAGGCCAGCCAGGCGCCGGTGAC GACGTTGATTGTCTCGGACGTGGCCGGCGACGATCCCAGTGCGATCGCTTCGGGGCCAACGGTAGCGGATCCCAGCACGT TCGCGGACGCGCTGGATATCCTGCGCCGTTACGGCGCGACGGTGCCGGCCAGCGTCCAGTCGCACCTTGAGCGCGGCGCG CGCGGTGAGGTGGCCGAGACGCCCAAGCCGGGCGATCCCCTGTTCGCGCGCGTCGACAACCGCATGATCGCTACCGCACA CGGTAGCCTGCAGGCGGCTGCGGCGCTGTTCCACGAACGCGGCATCACCCCGGTGATCCTCGGCGATACGGTAACGGGCG AAGCGCAGGAAGTTGCGCGCGTCTATGCCGCGCTGGTGCGTGAGATTCGCGCGTACAATGCGCCGTTTGCCGCGCCGGTT GCACTGATTTCTGGCGGTGAATGCACGGTCACATTGCCGGCCGGTGGTGGCAGCAGCAAGGCCCGGGGAGGGCGTTGTTC GGAATTCCTGCTGTCGCTGGCGATCGAACTGGCTGGCATGGAAGGTGTGTACGCCATTGCCGCCGACACCGACGGTATAG ACGGTTCCGAGGACAATGCGGGTGCACTGGCCGATCCGACGACCCTGGCGCGAGCGGATGCGGCAGGCGTGCCGGCCCGG CGCCAGCTCGATGCGCACGATGCCTGGGGTCTGTTCGATGCGGTAGGCGACCTGGTCGTGACCGGCCCGACGCGCACCAA TGTGAACGATTACCGCGCCATCCTGATTCTCTAA
Upstream 100 bases:
>100_bases AGAAGGTGTTGTCCGAGGGCCCCGACCATGCGCCGCTGACGCGCGATATCGGCGGCAAGGCGGGCACCGAGGACCTGGGC CGCGCAATCGCGGAGGCGCT
Downstream 100 bases:
>100_bases CTTTCAGTACGCCTGCCGGCATGCGGCGGCAGGCCCAGCAACCATGACTCAGAAGCTCACCATCACCCGCCCGGACGACT GGCACCTGCACCTGCGCGAC
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MSAPGSFTGDPRALLLETFQAAVAAADPLKIVAEYLPPPQPGGRTLVVGAGKAAASMALAAEQAYAGKAQVEGLVVTRYA HGLPTQHVRVIEAGHPVPDEAGEQAAADILTSVSSLTPADRLLVLVSGGGSSLLSLPAEGIPMADLKATTKELLRCGAPI TEMNIVRKHISRIQGGRLAQASQAPVTTLIVSDVAGDDPSAIASGPTVADPSTFADALDILRRYGATVPASVQSHLERGA RGEVAETPKPGDPLFARVDNRMIATAHGSLQAAAALFHERGITPVILGDTVTGEAQEVARVYAALVREIRAYNAPFAAPV ALISGGECTVTLPAGGGSSKARGGRCSEFLLSLAIELAGMEGVYAIAADTDGIDGSEDNAGALADPTTLARADAAGVPAR RQLDAHDAWGLFDAVGDLVVTGPTRTNVNDYRAILIL
Sequences:
>Translated_437_residues MSAPGSFTGDPRALLLETFQAAVAAADPLKIVAEYLPPPQPGGRTLVVGAGKAAASMALAAEQAYAGKAQVEGLVVTRYA HGLPTQHVRVIEAGHPVPDEAGEQAAADILTSVSSLTPADRLLVLVSGGGSSLLSLPAEGIPMADLKATTKELLRCGAPI TEMNIVRKHISRIQGGRLAQASQAPVTTLIVSDVAGDDPSAIASGPTVADPSTFADALDILRRYGATVPASVQSHLERGA RGEVAETPKPGDPLFARVDNRMIATAHGSLQAAAALFHERGITPVILGDTVTGEAQEVARVYAALVREIRAYNAPFAAPV ALISGGECTVTLPAGGGSSKARGGRCSEFLLSLAIELAGMEGVYAIAADTDGIDGSEDNAGALADPTTLARADAAGVPAR RQLDAHDAWGLFDAVGDLVVTGPTRTNVNDYRAILIL >Mature_436_residues SAPGSFTGDPRALLLETFQAAVAAADPLKIVAEYLPPPQPGGRTLVVGAGKAAASMALAAEQAYAGKAQVEGLVVTRYAH GLPTQHVRVIEAGHPVPDEAGEQAAADILTSVSSLTPADRLLVLVSGGGSSLLSLPAEGIPMADLKATTKELLRCGAPIT EMNIVRKHISRIQGGRLAQASQAPVTTLIVSDVAGDDPSAIASGPTVADPSTFADALDILRRYGATVPASVQSHLERGAR GEVAETPKPGDPLFARVDNRMIATAHGSLQAAAALFHERGITPVILGDTVTGEAQEVARVYAALVREIRAYNAPFAAPVA LISGGECTVTLPAGGGSSKARGGRCSEFLLSLAIELAGMEGVYAIAADTDGIDGSEDNAGALADPTTLARADAAGVPARR QLDAHDAWGLFDAVGDLVVTGPTRTNVNDYRAILIL
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=494, Percent_Identity=31.7813765182186, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193205461, Length=452, Percent_Identity=26.5486725663717, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI19920578, Length=491, Percent_Identity=28.5132382892057, Blast_Score=114, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 44670; Mature: 44539
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPGSFTGDPRALLLETFQAAVAAADPLKIVAEYLPPPQPGGRTLVVGAGKAAASMALA CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH AEQAYAGKAQVEGLVVTRYAHGLPTQHVRVIEAGHPVPDEAGEQAAADILTSVSSLTPAD HHHHHCCCHHHCEEEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC RLLVLVSGGGSSLLSLPAEGIPMADLKATTKELLRCGAPITEMNIVRKHISRIQGGRLAQ EEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC ASQAPVTTLIVSDVAGDDPSAIASGPTVADPSTFADALDILRRYGATVPASVQSHLERGA CCCCCEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC RGEVAETPKPGDPLFARVDNRMIATAHGSLQAAAALFHERGITPVILGDTVTGEAQEVAR CCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH VYAALVREIRAYNAPFAAPVALISGGECTVTLPAGGGSSKARGGRCSEFLLSLAIELAGM HHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC EGVYAIAADTDGIDGSEDNAGALADPTTLARADAAGVPARRQLDAHDAWGLFDAVGDLVV CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCEEE TGPTRTNVNDYRAILIL ECCCCCCCCCCEEEEEC >Mature Secondary Structure SAPGSFTGDPRALLLETFQAAVAAADPLKIVAEYLPPPQPGGRTLVVGAGKAAASMALA CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH AEQAYAGKAQVEGLVVTRYAHGLPTQHVRVIEAGHPVPDEAGEQAAADILTSVSSLTPAD HHHHHCCCHHHCEEEEEEHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC RLLVLVSGGGSSLLSLPAEGIPMADLKATTKELLRCGAPITEMNIVRKHISRIQGGRLAQ EEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC ASQAPVTTLIVSDVAGDDPSAIASGPTVADPSTFADALDILRRYGATVPASVQSHLERGA CCCCCEEEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCC RGEVAETPKPGDPLFARVDNRMIATAHGSLQAAAALFHERGITPVILGDTVTGEAQEVAR CCCCCCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH VYAALVREIRAYNAPFAAPVALISGGECTVTLPAGGGSSKARGGRCSEFLLSLAIELAGM HHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC EGVYAIAADTDGIDGSEDNAGALADPTTLARADAAGVPARRQLDAHDAWGLFDAVGDLVV CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCEEE TGPTRTNVNDYRAILIL ECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]