Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540127
Identifier: 73540127
GI number: 73540127
Start: 460446
End: 461675
Strand: Reverse
Name: 73540127
Synonym: Reut_A0421
Alternate gene names: NA
Gene position: 461675-460446 (Counterclockwise)
Preceding gene: 73540128
Following gene: 73540126
Centisome position: 12.13
GC content: 68.37
Gene sequence:
>1230_bases ATGGCCACGCTGCACCCCGCCCGCGCCAGCAGGCCTGGCCCCGCCCTGCCAGTGCTGGCCCGCAATGTCACGCATTTCAT GCGCCTGCTGCATGACGGTGGTTTCGCGCTGTCCCCCGCGCATTCGATTGACGCATTGGAAGCGCTGCAATATGTCGACA TCGGCCAGCGCGACGACGTGCGCGCAGCGCTCGCCGCACTGGTGCTCACAGGTCCCGACCAGCGCCCGCTGTTCGATGCC GCCTTCGACCTGTTCTGGCGCGACCCCGACTGGGAAGGCAAGCTGCGCGCGATGCTGCTGCCGCGCGTCGATGCGGGCGC GCCGCCGCCGCGCCGCAGCAACCGGCTCGCCGATGCACTCGCGGCACGCCAGCCGGAACTGCCCTCGCGCCCGCAACAAA CCGAAGCGGAACGCATGGCGGTACCGCTGACTTTCTCCGATCAGGAGCGCCTGGCGCAGCGCGATTTCGAAACGCTGACC GCGCAGGAATGGCGCGCATTGCAGCACCTGATCCGCAAACGCCGCGCGCACCTGGCAATGGAACGCACGCGCCGCCTGCG TCCGGCCAGCCGTGGCACCCATGCCGACCTGCGCGCCAGCGCGCGCCTGGCGGTACGTCAGCATGGCGAATGGCTGCGCT GGAAATACCGCCGCCACGCCGAACGCAAGCCTCCGGTCGTGCTGCTACTCGACATCTCCGGCTCGATGAGCCAGTACTCG CGCGCGGTGCTGTACTTCTGCCATGCGCTGACGCTGTCGCGCGAACGGCTGTCGGTGTTTCTGTTCGGCACGCGGCTCAC CAACATTACGCGCGCCTTGCGCGAACGCGATCCCGACGAGGCCGTGGCGGTGATCACCGGGCAGGTACGCGACTGGGCCG GCGGCACGCGCATCGGTGAAGCACTGGCCAGTTTCAACCGCCAGTGGGCGCGCCGCACGCTGTCCGGCCGGGCCACGGTG CTCCTCGTCACCGACGGGCTCGATCACGAACACATCGAACTGCTCGGCAACGAGATGGCGCGGCTGCGACGCTTTGCGCA CCGCATCATCTGGCTCAATCCTCTGCTGCGCTATCCGGGCTTCACACCACAGGCGCGCGGGGTACAGGCTATCCTGCCTC ATGTCGACGCGCTGCGGCCGGCCCACAATCTCGACAGCCTGCTTGCACTGCAGAGCTTGCTGTCCGAGCCGCATATGGGC CCCGCGCCAGCGGCTTCGTTTCACCTATGA
Upstream 100 bases:
>100_bases CACGCTCGGCGTGCTACTCAAGTACCAGGACGACCTGGCCCGCGCCGACGGCCCCACTGTCGCCGAACTGCTCGCGGGCA CATCAGCCGCGACCTGACCG
Downstream 100 bases:
>100_bases AATAAACAAGGAATCCGCCCCATGGAAATGAACCAGAGCCAGCGCCTGCCGGTGCCCCAGCAAGTGGCATGGGAGGCCCT CAACGACACGGCGCTGCTCA
Product: VWA containing CoxE-like
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein; CoxE-Like Protein
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MATLHPARASRPGPALPVLARNVTHFMRLLHDGGFALSPAHSIDALEALQYVDIGQRDDVRAALAALVLTGPDQRPLFDA AFDLFWRDPDWEGKLRAMLLPRVDAGAPPPRRSNRLADALAARQPELPSRPQQTEAERMAVPLTFSDQERLAQRDFETLT AQEWRALQHLIRKRRAHLAMERTRRLRPASRGTHADLRASARLAVRQHGEWLRWKYRRHAERKPPVVLLLDISGSMSQYS RAVLYFCHALTLSRERLSVFLFGTRLTNITRALRERDPDEAVAVITGQVRDWAGGTRIGEALASFNRQWARRTLSGRATV LLVTDGLDHEHIELLGNEMARLRRFAHRIIWLNPLLRYPGFTPQARGVQAILPHVDALRPAHNLDSLLALQSLLSEPHMG PAPAASFHL
Sequences:
>Translated_409_residues MATLHPARASRPGPALPVLARNVTHFMRLLHDGGFALSPAHSIDALEALQYVDIGQRDDVRAALAALVLTGPDQRPLFDA AFDLFWRDPDWEGKLRAMLLPRVDAGAPPPRRSNRLADALAARQPELPSRPQQTEAERMAVPLTFSDQERLAQRDFETLT AQEWRALQHLIRKRRAHLAMERTRRLRPASRGTHADLRASARLAVRQHGEWLRWKYRRHAERKPPVVLLLDISGSMSQYS RAVLYFCHALTLSRERLSVFLFGTRLTNITRALRERDPDEAVAVITGQVRDWAGGTRIGEALASFNRQWARRTLSGRATV LLVTDGLDHEHIELLGNEMARLRRFAHRIIWLNPLLRYPGFTPQARGVQAILPHVDALRPAHNLDSLLALQSLLSEPHMG PAPAASFHL >Mature_408_residues ATLHPARASRPGPALPVLARNVTHFMRLLHDGGFALSPAHSIDALEALQYVDIGQRDDVRAALAALVLTGPDQRPLFDAA FDLFWRDPDWEGKLRAMLLPRVDAGAPPPRRSNRLADALAARQPELPSRPQQTEAERMAVPLTFSDQERLAQRDFETLTA QEWRALQHLIRKRRAHLAMERTRRLRPASRGTHADLRASARLAVRQHGEWLRWKYRRHAERKPPVVLLLDISGSMSQYSR AVLYFCHALTLSRERLSVFLFGTRLTNITRALRERDPDEAVAVITGQVRDWAGGTRIGEALASFNRQWARRTLSGRATVL LVTDGLDHEHIELLGNEMARLRRFAHRIIWLNPLLRYPGFTPQARGVQAILPHVDALRPAHNLDSLLALQSLLSEPHMGP APAASFHL
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46187; Mature: 46056
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLHPARASRPGPALPVLARNVTHFMRLLHDGGFALSPAHSIDALEALQYVDIGQRDDV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHH RAALAALVLTGPDQRPLFDAAFDLFWRDPDWEGKLRAMLLPRVDAGAPPPRRSNRLADAL HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH AARQPELPSRPQQTEAERMAVPLTFSDQERLAQRDFETLTAQEWRALQHLIRKRRAHLAM HHCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERTRRLRPASRGTHADLRASARLAVRQHGEWLRWKYRRHAERKPPVVLLLDISGSMSQYS HHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH RAVLYFCHALTLSRERLSVFLFGTRLTNITRALRERDPDEAVAVITGQVRDWAGGTRIGE HHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCHHHHH ALASFNRQWARRTLSGRATVLLVTDGLDHEHIELLGNEMARLRRFAHRIIWLNPLLRYPG HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FTPQARGVQAILPHVDALRPAHNLDSLLALQSLLSEPHMGPAPAASFHL CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ATLHPARASRPGPALPVLARNVTHFMRLLHDGGFALSPAHSIDALEALQYVDIGQRDDV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCCCCCHH RAALAALVLTGPDQRPLFDAAFDLFWRDPDWEGKLRAMLLPRVDAGAPPPRRSNRLADAL HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH AARQPELPSRPQQTEAERMAVPLTFSDQERLAQRDFETLTAQEWRALQHLIRKRRAHLAM HHCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERTRRLRPASRGTHADLRASARLAVRQHGEWLRWKYRRHAERKPPVVLLLDISGSMSQYS HHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHH RAVLYFCHALTLSRERLSVFLFGTRLTNITRALRERDPDEAVAVITGQVRDWAGGTRIGE HHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCHHHHH ALASFNRQWARRTLSGRATVLLVTDGLDHEHIELLGNEMARLRRFAHRIIWLNPLLRYPG HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FTPQARGVQAILPHVDALRPAHNLDSLLALQSLLSEPHMGPAPAASFHL CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA