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The map label for this gene is ybhS [H]

Identifier: 73540113

GI number: 73540113

Start: 445491

End: 446639

Strand: Reverse

Name: ybhS [H]

Synonym: Reut_A0407

Alternate gene names: 73540113

Gene position: 446639-445491 (Counterclockwise)

Preceding gene: 73540114

Following gene: 73540112

Centisome position: 11.73

GC content: 64.4

Gene sequence:

>1149_bases
ATGAAACGCAAAGGACGATTCAGCTTCTCCTTCGACCGGTGGTGGAGCATCGTGCTCAAGGAGTTCCTCCAGTTGCGGCG
CGACCGTGTCACGTTCGGCATGATCGTGGGCCTGCCGATCATGCAGCTGCTGCTGTTCGGCTTTGCCATCAACACTGATC
CGCGGCACCTGCCGACCGCCGTGATCGCCGCGGACCAGAGCGAATTCACGCGCTCGTTCCTGGCCAGCATGGAGCACTCG
ACCTACTTCAAGATGGTCGGCACGCTGCCGGACGAAGACGCCGGGCGCGAGGCGCTGATGAAGGGCAACGTGCAGTTCGT
GGTCAGCATCCCGCCCGATTTCACGCGCAAGCTGTTGCGTGGCGAACGGCCCGCGCTGCTGGTGGAGGCGGACGCGACGG
ACCCGTCCGCGACCGGCGCCGCCATCGCCGCGCTCGCACAGCTGCCGTTCACCGTGGCGCGTGTCGACATGAAAGGGGCG
CTCGCCCCGTTGGCCGGCGGCAAGGCGCCGTTCGACGTGCAGGTGCAGCGGCTCTACAACCCTGAGGGCATCACGCAGTA
CAACATCATCCCCGGGCTGATGGGCGTAATCCTGTCGATGACGATGGTGATGATGACGGGCCTGGCGATGACGCGCGAAC
GCGAGCGCGGCACCATGGAAAACCTGCTCGCCACGCCAGTGAAGCCGATCGAGGTCATGACCGGCAAGATCGTGCCGTAC
ATCTTCATCGGCCTGATCCAGTCGACCATCGTGCTGCTCGCCGCGCGCTGGGTGTTCCAGGTGCCGTTCTTCGGCTCCGT
CATCGCGGTGTACCTGGCGGCGCTGCTGTTCATCGCGGCCAACCTGACGGTGGGCATCACGCTGTCGTCGCTCGCGCAAA
ACCAGTTGCAGGCGATGCAGCTCACGTTCTTCTACTTCCTGCCCAACATCCTGCTGTCCGGCTTCATGTTCCCGTTCGCG
GGCATGCCCGGGTGGGCGCAGGGCATCGGCAACATCCTGCCGATGACTTACTTCCACCGCATGATTCGCGGCATCCTGCT
CAAGGGCAACGGCTGGACCGAGTTGTGGCCCAATGTGTGGCCGATGGCCCTGTTCATCGTGGTGGTGATGGCGATCGCGG
TGCGCTTCTACCGCCGCACGCTGGACTGA

Upstream 100 bases:

>100_bases
CGACCCAGACCAGTCTCGAAGACGTCTTCATCCACATGATGAGCCGTGCGGAGGACAACATGAACGCCGGCGACGGCCGC
AAGCCGCATAAGGGGAAGCC

Downstream 100 bases:

>100_bases
AGGAGCCACGCCATGCGTTCCCGTCTTCCATTACTAGCCTGCCTGCTGCTTTCGGCGTGCGCGGTCGGCCCCGATTTCCG
TGCGCCGGCACCAACCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MKRKGRFSFSFDRWWSIVLKEFLQLRRDRVTFGMIVGLPIMQLLLFGFAINTDPRHLPTAVIAADQSEFTRSFLASMEHS
TYFKMVGTLPDEDAGREALMKGNVQFVVSIPPDFTRKLLRGERPALLVEADATDPSATGAAIAALAQLPFTVARVDMKGA
LAPLAGGKAPFDVQVQRLYNPEGITQYNIIPGLMGVILSMTMVMMTGLAMTRERERGTMENLLATPVKPIEVMTGKIVPY
IFIGLIQSTIVLLAARWVFQVPFFGSVIAVYLAALLFIAANLTVGITLSSLAQNQLQAMQLTFFYFLPNILLSGFMFPFA
GMPGWAQGIGNILPMTYFHRMIRGILLKGNGWTELWPNVWPMALFIVVVMAIAVRFYRRTLD

Sequences:

>Translated_382_residues
MKRKGRFSFSFDRWWSIVLKEFLQLRRDRVTFGMIVGLPIMQLLLFGFAINTDPRHLPTAVIAADQSEFTRSFLASMEHS
TYFKMVGTLPDEDAGREALMKGNVQFVVSIPPDFTRKLLRGERPALLVEADATDPSATGAAIAALAQLPFTVARVDMKGA
LAPLAGGKAPFDVQVQRLYNPEGITQYNIIPGLMGVILSMTMVMMTGLAMTRERERGTMENLLATPVKPIEVMTGKIVPY
IFIGLIQSTIVLLAARWVFQVPFFGSVIAVYLAALLFIAANLTVGITLSSLAQNQLQAMQLTFFYFLPNILLSGFMFPFA
GMPGWAQGIGNILPMTYFHRMIRGILLKGNGWTELWPNVWPMALFIVVVMAIAVRFYRRTLD
>Mature_382_residues
MKRKGRFSFSFDRWWSIVLKEFLQLRRDRVTFGMIVGLPIMQLLLFGFAINTDPRHLPTAVIAADQSEFTRSFLASMEHS
TYFKMVGTLPDEDAGREALMKGNVQFVVSIPPDFTRKLLRGERPALLVEADATDPSATGAAIAALAQLPFTVARVDMKGA
LAPLAGGKAPFDVQVQRLYNPEGITQYNIIPGLMGVILSMTMVMMTGLAMTRERERGTMENLLATPVKPIEVMTGKIVPY
IFIGLIQSTIVLLAARWVFQVPFFGSVIAVYLAALLFIAANLTVGITLSSLAQNQLQAMQLTFFYFLPNILLSGFMFPFA
GMPGWAQGIGNILPMTYFHRMIRGILLKGNGWTELWPNVWPMALFIVVVMAIAVRFYRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=349, Percent_Identity=30.0859598853868, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=26.8292682926829, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI48994943, Length=375, Percent_Identity=27.4666666666667, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI226510979, Length=333, Percent_Identity=28.8288288288288, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24650855, Length=373, Percent_Identity=25.201072386059, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24650853, Length=373, Percent_Identity=25.201072386059, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI85725260, Length=367, Percent_Identity=24.2506811989101, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85725262, Length=367, Percent_Identity=24.2506811989101, Blast_Score=85, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42558; Mature: 42558

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKGRFSFSFDRWWSIVLKEFLQLRRDRVTFGMIVGLPIMQLLLFGFAINTDPRHLPTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VIAADQSEFTRSFLASMEHSTYFKMVGTLPDEDAGREALMKGNVQFVVSIPPDFTRKLLR
HEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHC
GERPALLVEADATDPSATGAAIAALAQLPFTVARVDMKGALAPLAGGKAPFDVQVQRLYN
CCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCCCCCCHHHHEECC
PEGITQYNIIPGLMGVILSMTMVMMTGLAMTRERERGTMENLLATPVKPIEVMTGKIVPY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCHHHHH
IFIGLIQSTIVLLAARWVFQVPFFGSVIAVYLAALLFIAANLTVGITLSSLAQNQLQAMQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH
LTFFYFLPNILLSGFMFPFAGMPGWAQGIGNILPMTYFHRMIRGILLKGNGWTELWPNVW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCHH
PMALFIVVVMAIAVRFYRRTLD
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRKGRFSFSFDRWWSIVLKEFLQLRRDRVTFGMIVGLPIMQLLLFGFAINTDPRHLPTA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
VIAADQSEFTRSFLASMEHSTYFKMVGTLPDEDAGREALMKGNVQFVVSIPPDFTRKLLR
HEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHC
GERPALLVEADATDPSATGAAIAALAQLPFTVARVDMKGALAPLAGGKAPFDVQVQRLYN
CCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCHHHCCCCCCCCCCCCCHHHHEECC
PEGITQYNIIPGLMGVILSMTMVMMTGLAMTRERERGTMENLLATPVKPIEVMTGKIVPY
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCHHHHH
IFIGLIQSTIVLLAARWVFQVPFFGSVIAVYLAALLFIAANLTVGITLSSLAQNQLQAMQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH
LTFFYFLPNILLSGFMFPFAGMPGWAQGIGNILPMTYFHRMIRGILLKGNGWTELWPNVW
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCHH
PMALFIVVVMAIAVRFYRRTLD
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]