Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540105
Identifier: 73540105
GI number: 73540105
Start: 435843
End: 436283
Strand: Direct
Name: 73540105
Synonym: Reut_A0399
Alternate gene names: NA
Gene position: 435843-436283 (Clockwise)
Preceding gene: 73540104
Following gene: 73540106
Centisome position: 11.45
GC content: 64.63
Gene sequence:
>441_bases ATGCCATGCCGGTGCGCGCGCTTGCGCAGCGCCAGGCAGGCGCGTGGGTTCACGCTGATCGAAGTGATGATCACCGTGGC CATTATCGGCATCATGGCGGCCATCGCCATTCCGTCCTATACGCGGTACGTGTTGCGCTCGAACCGGGCGGCAGCCGAGG CGTTCATGCTCGAAGTCTCGGGCGCGCAAGAGCGATATCTGCTCGACAACCGCGCCTACGCGTCCAGCATGGCTACGCTC GGGTACACCACTGTGCCATCGAGCGTCGCGACCAACTATACCGTCACCACCGCGCTCGTTGCGGGTCCACCCCCTGCATA CAACATCGTCGCAACGCCCGTCGGCTCGCAGCTCAGCGGCGATACGTCCTGCGGCACCCTGACCCTGACTAGTGCCGGCG TCAAGTCAGCGTCGGGCAGCGGTTCCAACTGCTGGAACTGA
Upstream 100 bases:
>100_bases CGCGAGCATGGGACATAGAAGCCCTGCAGTGCGACACGACAGCAGGGTCAAGCTTGTAACGCTGTCGTTTCGGGTCATTG GGGAAGGTGGGTCTGCCGGC
Downstream 100 bases:
>100_bases ACATGGCTGCCTTCGGCTCGTCTCCCTTGCCTCAAGCCAGTCGCGGCGGATTCACGCTTGTCGAGATGATTGCCGTCGTG ACGATTCTGGCGATCATCAC
Product: general secretion pathway protein H
Products: NA
Alternate protein names: Type 4 Fimbrial Biogenesis Transmembrane Protein; Type IV Pilus Biogenesis Protein PilE; General Secretion Pathway Protein H; Type 4 Fimbrial Biogenesis Protein PilE; Protein Involved In Methylation; Type IV Pilus Assembly Protein PilE; Pilus Assembly Protein PilE
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPCRCARLRSARQARGFTLIEVMITVAIIGIMAAIAIPSYTRYVLRSNRAAAEAFMLEVSGAQERYLLDNRAYASSMATL GYTTVPSSVATNYTVTTALVAGPPPAYNIVATPVGSQLSGDTSCGTLTLTSAGVKSASGSGSNCWN
Sequences:
>Translated_146_residues MPCRCARLRSARQARGFTLIEVMITVAIIGIMAAIAIPSYTRYVLRSNRAAAEAFMLEVSGAQERYLLDNRAYASSMATL GYTTVPSSVATNYTVTTALVAGPPPAYNIVATPVGSQLSGDTSCGTLTLTSAGVKSASGSGSNCWN >Mature_145_residues PCRCARLRSARQARGFTLIEVMITVAIIGIMAAIAIPSYTRYVLRSNRAAAEAFMLEVSGAQERYLLDNRAYASSMATLG YTTVPSSVATNYTVTTALVAGPPPAYNIVATPVGSQLSGDTSCGTLTLTSAGVKSASGSGSNCWN
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15237; Mature: 15105
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCRCARLRSARQARGFTLIEVMITVAIIGIMAAIAIPSYTRYVLRSNRAAAEAFMLEVS CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEEEEEC GAQERYLLDNRAYASSMATLGYTTVPSSVATNYTVTTALVAGPPPAYNIVATPVGSQLSG CCCCCEEECCHHHHHHHHHCCCCCCCCHHHCCEEEEEEEEECCCCCCEEEECCCCCCCCC DTSCGTLTLTSAGVKSASGSGSNCWN CCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PCRCARLRSARQARGFTLIEVMITVAIIGIMAAIAIPSYTRYVLRSNRAAAEAFMLEVS CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHEEEEEEC GAQERYLLDNRAYASSMATLGYTTVPSSVATNYTVTTALVAGPPPAYNIVATPVGSQLSG CCCCCEEECCHHHHHHHHHCCCCCCCCHHHCCEEEEEEEEECCCCCCEEEECCCCCCCCC DTSCGTLTLTSAGVKSASGSGSNCWN CCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA