| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
Click here to switch to the map view.
The map label for this gene is yhbN [C]
Identifier: 73540063
GI number: 73540063
Start: 387036
End: 387677
Strand: Reverse
Name: yhbN [C]
Synonym: Reut_A0357
Alternate gene names: 73540063
Gene position: 387677-387036 (Counterclockwise)
Preceding gene: 73540064
Following gene: 73540062
Centisome position: 10.18
GC content: 69.63
Gene sequence:
>642_bases ATGATTGCCTCCCTGTCGACCTTGTCCCGCCGGCGCGCCGCCCCGGTGCTGCTGGCCGCAGCCGCCGTGCTTGCCGCGCT GGCGCCGCCGGCCGCCCATGCCGAACGCGCGGACCGGGACAAGCCACTGGTACTGGAAGCCGATAACGCCAGCTACGACG ACGTCAAGCAGATCTACACGCTGACCGGCAATGTGGTCCTGACCAAGGGCACCATGGTGCTGAAGTCCGACGCCGCCGAG ATCCGCACCGACCCCGAGGGCTACCAGTACGCGGTGGCCACGGCCAAGGGCGGCAAGCAGGCGTATATCCGCCAGAAGCG TGACGGCGTCGACGAGTACATGGACGGCTGGGGCGATCGCATCGAGTACGACGGCAAGCAGGAGCTGTCCAAGCTGATCG GCCACGCACGCATGGCGCGCCTGCAAGGTGCCAAGCTCGTCGACGAGATCCGCGGCGCGGTGCTGACCTATGACAGCCGC AACGAGTTCTATACCGCGGCCGGCGGGGGTGACAACACCTCGGCCGGCAACCCGTCTGGACGCGTGCGCGCGGTGCTCTC GCCGCGCCAGGAAGCGAGTGGTGCGGCCGCTGCCCCGCCGCTCGACCTGAAGCCGGCGCCCGCGCCGTCCAGCAAGCCCT GA
Upstream 100 bases:
>100_bases CTCCGGGATCCTGACAACAACAGCCGCCCGCGCGCGACGGGGCGGCACCGCGGACCCGAGGTTCGCGCGAATTTCCGCCT TCCTGCGACCCTTTGCCAAC
Downstream 100 bases:
>100_bases ATCCCGCGCGCGAGCGCACGACCGCCATCATGACCGATACCGCAACACTCGCCCCCACGCCCGCTTCCGCCGCCAACGAC GTCCGTGCCGAGAGCAGCAC
Product: OstA-like protein
Products: NA
Alternate protein names: OstA-Like Protein; OstA Family Protein; OstA-Like Family Protein; Signal Peptide Protein; Cell Envelope Biogenesis Protein YhbN; Lipopolysaccharide Transport Periplasmic Protein Lpta; Protein YhbN; Exported Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MIASLSTLSRRRAAPVLLAAAAVLAALAPPAAHAERADRDKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAE IRTDPEGYQYAVATAKGGKQAYIRQKRDGVDEYMDGWGDRIEYDGKQELSKLIGHARMARLQGAKLVDEIRGAVLTYDSR NEFYTAAGGGDNTSAGNPSGRVRAVLSPRQEASGAAAAPPLDLKPAPAPSSKP
Sequences:
>Translated_213_residues MIASLSTLSRRRAAPVLLAAAAVLAALAPPAAHAERADRDKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAE IRTDPEGYQYAVATAKGGKQAYIRQKRDGVDEYMDGWGDRIEYDGKQELSKLIGHARMARLQGAKLVDEIRGAVLTYDSR NEFYTAAGGGDNTSAGNPSGRVRAVLSPRQEASGAAAAPPLDLKPAPAPSSKP >Mature_213_residues MIASLSTLSRRRAAPVLLAAAAVLAALAPPAAHAERADRDKPLVLEADNASYDDVKQIYTLTGNVVLTKGTMVLKSDAAE IRTDPEGYQYAVATAKGGKQAYIRQKRDGVDEYMDGWGDRIEYDGKQELSKLIGHARMARLQGAKLVDEIRGAVLTYDSR NEFYTAAGGGDNTSAGNPSGRVRAVLSPRQEASGAAAAPPLDLKPAPAPSSKP
Specific function: Unknown
COG id: COG1934
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22550; Mature: 22550
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASLSTLSRRRAAPVLLAAAAVLAALAPPAAHAERADRDKPLVLEADNASYDDVKQIYT CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHH LTGNVVLTKGTMVLKSDAAEIRTDPEGYQYAVATAKGGKQAYIRQKRDGVDEYMDGWGDR HCCCEEEECCEEEEECCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCC IEYDGKQELSKLIGHARMARLQGAKLVDEIRGAVLTYDSRNEFYTAAGGGDNTSAGNPSG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCCC RVRAVLSPRQEASGAAAAPPLDLKPAPAPSSKP CEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIASLSTLSRRRAAPVLLAAAAVLAALAPPAAHAERADRDKPLVLEADNASYDDVKQIYT CCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCHHHHHHHHH LTGNVVLTKGTMVLKSDAAEIRTDPEGYQYAVATAKGGKQAYIRQKRDGVDEYMDGWGDR HCCCEEEECCEEEEECCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCC IEYDGKQELSKLIGHARMARLQGAKLVDEIRGAVLTYDSRNEFYTAAGGGDNTSAGNPSG CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEECCCCEEEECCCCCCCCCCCCCC RVRAVLSPRQEASGAAAAPPLDLKPAPAPSSKP CEEEEECCCHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA